Names & Information
Knowledge of BnaC09G0082800ZY:
| Gene Name | BnaC09G0082800ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g07660D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1 |
| NT seq | Len:2106 nt ATGAACGATTGGGTTTCTCTAGGTTTAGGTTCTATTGGGGGAGCTTTGGTCTCCGAGGTTCTGAAACTAATAATCGAAGA GGCAAAGAAGTACAAATCCTTCAAACCCTTGTCCAAAGATCTAGCGGAAACGATGGAGAGATTGCTTCCGTTGACCAAAG AGATCGATTCGATGCAAAACGAGCTAGACCTTGGTTCAGGAGAGCTAAAGAAACTGATGGAAACGATAAAAAAAGCTTAT GTACTGGTTCTCAAGCTTAAAGACGACGACGTCTGGTTCTTCGAGAAATCTAAGTACGCCAGAGAAATAGAGGATATCAA TAAAGATATGACCAAGTTCTGTGATATTACTCTACAGGTTCTTCAGTATAGGAACCAGTTGAAGTTGTTGAATCTTGGGG GGAACGTTGTGAATATGGTGTACGGTTTAGATAAGAAAATAGATGGCTTGAGCGTTCCCGTTCCCGTTTTCAAAGACCTT TGTTCGGTTCCCAAGCTTAATAAGGCACCCGTTGGATTCGCTTGGCCATTGATAGAGCTTAAGAAGATACTCCTTGACGA TGCAGTGGTTAATCTTGTGGTCTCTGCTCCTCCCGGGTGCGGTAAAACCACGCTAGCTACTCAGCTTTGCCACGATGCAG ATGTCAAAGGTGGACCTATAAAGTTTCCATCTTTACACTTTTTACTCAATGTTCATGAAATAGCTAGGCGGATATTGAAA CGCTGTAATGGATTCCCAATCGTTATTGAAGTCGTTGGCGTCTCACTTAATGGACAAACTCTAACTACATGGAAAGGGCA GGTGGAAAGCTGGTCTCAAGGGGAAACGGTTCTTGATATTCCTTCTCAGCCTACTGTGTTGGAATGTCTGCAGCCTAGCT TCAATGCGCTGGTACCTAATCTCAAAGAGTGTTTCTTGGACATGGGCTCATTTCTTGAAGACCAAAAGATACGTGCTTCT GTAATCATTGACATTTGGATGGAACTATATGGTAAAAGTAGTAGTATCTTGTGCATGAAGTACCTTGAAGACCTTGCCTC TCAGAATCTACTCAAACTTGTTCCTCTAGGGAATGAGACTGAAGATGGTTTCTACAATGAGTTCTTAGTCACTCAACATG ATATCCTTAGGGAGTTGGCTATACGTCAAAGCGAATTGGAAGCAATCTTGGAAAGGAAAAGACTAAATTTGGAGATAAGA GAGGATACATTTCCAGACTGGTGTTTGAAGGGACCTGTTGTTAATGCCTCTCTATTGTCTATCTCCACAGATGATTTGTT CTCATCAAACTGGGTTGAAATGGATTGTCCCAGTGTGGAGGTTTTAGTTCTTAACCTTTCTTCATCAGACTATGCATTAC CAAGCTTCATTGCTGGAATGAGGAAGCTAAAGGTTCTGACAATAACAAATCACGGTTTCTATCCAGCAAGATTGAGTAAC TTCTCGTGTCTCAGCTTATTACCAAACCTGAAACGGATCAGATTGGAGAAAGTTTCAGTCACGTTGCTCGACATTCCCCA GTTGAAACTCCGCAGTCTCAAGAAGTTGTCTTTGGTCATGTGTAGTTTCGGTGATGTTTTCTACGACTGTGAAGATATAG ATGTCTCTAAAGCCCTTCCTAGTTTACAGGAGATTGACATAGACTATTGCTATGATCTTGATGAGTTACCGTATTGGGTC TGTGAAGTTGTTTCACTGAAGACACTTAGCATCACAAACTGTAACAAGCTCACTGTACTTTCTGAAGCTATAGGCAACTT GAGTAAACTAGAAGTGTTGAGGGTGAGTTCTTGCATTAATCTCTCCGAGCTGCCTGAAACTACTGATAAACTCAGCAACT TGCGGTTTCTGGATATATCTCATTGCTTGGGATTGAGAAAGTTGCCTTTAAAGATTGGAAAGCTGCAGAAGCTGAAGAGG ATCTCGATGAGAAAGTGTTGGAGATGCGAGTTGCCAGATTCAGTGAGGGATCTAGAGGATCTGGAGGTAAAATGTGAGGA AGAAACCAGGTCGATGTTGTGGGAAAGGTTGATGCCAAAAATGAGAAACTTGATAGTTCATGAGGATGAAACAGAGCACA ACCTCAACTTGCTTCAAATGTTTTAA |
| AA seq | Len:702 aa MNDWVSLGLGSIGGALVSEVLKLIIEEAKKYKSFKPLSKDLAETMERLLPLTKEIDSMQNELDLGSGELKKLMETIKKAY VLVLKLKDDDVWFFEKSKYAREIEDINKDMTKFCDITLQVLQYRNQLKLLNLGGNVVNMVYGLDKKIDGLSVPVPVFKDL CSVPKLNKAPVGFAWPLIELKKILLDDAVVNLVVSAPPGCGKTTLATQLCHDADVKGGPIKFPSLHFLLNVHEIARRILK RCNGFPIVIEVVGVSLNGQTLTTWKGQVESWSQGETVLDIPSQPTVLECLQPSFNALVPNLKECFLDMGSFLEDQKIRAS VIIDIWMELYGKSSSILCMKYLEDLASQNLLKLVPLGNETEDGFYNEFLVTQHDILRELAIRQSELEAILERKRLNLEIR EDTFPDWCLKGPVVNASLLSISTDDLFSSNWVEMDCPSVEVLVLNLSSSDYALPSFIAGMRKLKVLTITNHGFYPARLSN FSCLSLLPNLKRIRLEKVSVTLLDIPQLKLRSLKKLSLVMCSFGDVFYDCEDIDVSKALPSLQEIDIDYCYDLDELPYWV CEVVSLKTLSITNCNKLTVLSEAIGNLSKLEVLRVSSCINLSELPETTDKLSNLRFLDISHCLGLRKLPLKIGKLQKLKR ISMRKCWRCELPDSVRDLEDLEVKCEEETRSMLWERLMPKMRNLIVHEDETEHNLNLLQMF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0043531 |
| Pfam | Leucine rich repeat |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |