Names & Information
Knowledge of BnaC09G0088300WE:
| Gene Name | BnaC09G0088300WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g06020D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:2334 nt ATGATTGGAATATGGGGTCCTGCTGGAATCGGCAAGTCCACGATTGCTAGAGTTTTATTCTGTCAGCTTTCTACCGATTT TCCACTTGGATGCTTTATGGGGAACCTCAAGGGAGGTTACAAGAGCATCATTGGTGTTGATGATTATGATTTGAAGTTGG GTTTGCAAAACCAACTCCTGTCTAAGATTTTGAATCAAAGGGATATGAGGGTGTATCATCTAGGTTCAATAAAAGAATGG CTACAAGATCAAAGAGTTCTTATCGTTCTTGATGATGTAGATGATCTAGATACACTAGACGTCTTGGCTAAAGAACTTTC CTGGTTTGGTTTGGGAAGTCGGATCATTGTTACCACAGAAGATAAAAAGATTTTGAAAGCACATGGGGTTCCAGATACCT ACCAATACCATGTCGATTTTCCATCCTCAAAAGAAGCCGTGGAGATCTTGTGTCTATCTGCTTTTAACCACAGTTCTCCA CGAGAGGGTTTTGAAGAGGTCGCAAACAAAGTAGCAAAGCTTTGCGGTAATCTTCCGTTAGGCCTTTGTGTTGTGGGCTC ATCTTTGCGTGGGGAGAGCAAGCAAGAGTGGGAACTTCAGTTATCTAGGATCGAAACTAGTCTTGATGCAAAAATCATAG ACGTTTTAAGAGTGGGATATGACAGATTGTCAAAGAAAGATCAATCAATATTCCTTCACGTTGCAAGCATCTTCAACAAT AATGGTTTTCTCTATGTGAAAGCCATGCTCGCTAACAGTAATTTGGATTTCGAAAATGGGTTGAAGACCCTAGATCTTAA ATCTCTTGTGGATATATCTTTTGGGTGGATAGAGATGCACTCTTTACTACAACAATTGGGGAGACAAGTAGTTTATGAAC AGTCTGATGAGCCCGGGAAACGTCAGTTTTTAGTAGAGGCCGACGAGATTTGTACTGTGCTTGCAAATGAAACAGGGACT GGATCTGTCATAGGTATATCACTTGATACGTCGAAGGTCGGCGGGATGATTTCTATAAGTGGGCGAGCCTTTGAAGGAAT GCGTAATCTCCGGTTCTTAAGATTTTACATGGGTTCTTATAATGAAAATGCTAGCTTCCCATGCATACTAGGGGATTTGA CATATCTGCCTCGTCTAAGTATGCTTGATTGGGCGTTTTACCCAGGAAAACGTCTTCCTTCAACATTTCAGCCAGAATGT CTCGTTACGCTCCGTATGACGCACAGCAATCTCGAGAAGCTCTGGGGAGGAATCCAGCCCCTTGCAAATCTCAACGAGAT GGATCTTAGCTTTTCCTATAAGCTGAAAGAAATGCCAAATCTTACGAATGCTACTAATCTTGAGACATTGACACTGACGG GCACAAGCCTGGTGGAGCTTCCCTCTTCTATTAAAAACTCACACAGACTGAAAGAGTTGAAGATGAGCTACTGTACTAAA CTACGAGTCATTCCCACCAACAACATCAACTTAGCATCTCTTGAGAAAGTCGACATGAACGGTTGCTCACGGTTGAGAAC TTTTCCAAATATTTCTAGCAACATTGAATATCTTGATGTAGGAAACACAAAGATAGAAGATGTTCCTGCGTCTGTTGCTG AACGCTGGTCTCGCCTCAAGTATCTTATCATAGGCAACAAAAGCCTCAAGAGATTAACGCATGTCCCTATAAATGTAATT TATCTAGACCTAAGCAACAGTGATATAAAGAGGATTCCAGATTGTGTCATCGGTCTCCGGCATCTGCACGATCTTATCAT CAGAAACTGCAGAAAACTAGTGTCACTGCAGAGTCTTCCCCTTTCGGTTTGGCTTCTCGATGCAACTGATTGTGGATCGC TCAAAAGCGTACCATCTTCCATTTTCCATCCATTCAGAAAGTCCATGTTCCGTAACTGTTTGAAACTTGATGAAGAAGCA AGAAGGCTAATAATACAACGATGGGATAGGTGTTCTTTTTTTGAAAAAAGCAGAGAAATCCCTGCTGAGTTCACTCACAA AGCCACAGGAAACTCCATAACCATCCCTGAGGGTACTTTCTCCACGTCTTCAAGTTTCAAGGCATGCGTCCTGCTTTCAT CAGCCCTAGGGGTACAGTACTTAGATAGTAGTCTCTATTGTCGTCTAAGAAGCAAAGGTGAGCTCATCAACGAACTTAGG TTGTCTGTCGAGACGACGCATGCATTTCTGTCGGAACACCTGTTAGTGCTTTGTGGGACTTGTTTCAAAAAGAGAGATGC CATGACGTGGACGTGTCTAGGAGTGATATTATATTTGAATTCAGCTGCCGAGACAACGATGAAAACATTATTGAGTGTGG TGTGCATATCTTGA |
| AA seq | Len:778 aa MIGIWGPAGIGKSTIARVLFCQLSTDFPLGCFMGNLKGGYKSIIGVDDYDLKLGLQNQLLSKILNQRDMRVYHLGSIKEW LQDQRVLIVLDDVDDLDTLDVLAKELSWFGLGSRIIVTTEDKKILKAHGVPDTYQYHVDFPSSKEAVEILCLSAFNHSSP REGFEEVANKVAKLCGNLPLGLCVVGSSLRGESKQEWELQLSRIETSLDAKIIDVLRVGYDRLSKKDQSIFLHVASIFNN NGFLYVKAMLANSNLDFENGLKTLDLKSLVDISFGWIEMHSLLQQLGRQVVYEQSDEPGKRQFLVEADEICTVLANETGT GSVIGISLDTSKVGGMISISGRAFEGMRNLRFLRFYMGSYNENASFPCILGDLTYLPRLSMLDWAFYPGKRLPSTFQPEC LVTLRMTHSNLEKLWGGIQPLANLNEMDLSFSYKLKEMPNLTNATNLETLTLTGTSLVELPSSIKNSHRLKELKMSYCTK LRVIPTNNINLASLEKVDMNGCSRLRTFPNISSNIEYLDVGNTKIEDVPASVAERWSRLKYLIIGNKSLKRLTHVPINVI YLDLSNSDIKRIPDCVIGLRHLHDLIIRNCRKLVSLQSLPLSVWLLDATDCGSLKSVPSSIFHPFRKSMFRNCLKLDEEA RRLIIQRWDRCSFFEKSREIPAEFTHKATGNSITIPEGTFSTSSSFKACVLLSSALGVQYLDSSLYCRLRSKGELINELR LSVETTHAFLSEHLLVLCGTCFKKRDAMTWTCLGVILYLNSAAETTMKTLLSVVCIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |