Names & Information
Knowledge of BnaC09G0102800WE:
| Gene Name | BnaC09G0102800WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: putative disease resistance RPP13-like protein 3 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=3 SV=1 |
| NT seq | Len:3078 nt ATGAACCTCTGTCGCCTCTGTCGAAAGGGAAAGAGAAATTTTTTTTTTGTTTTCGGGTTCAAGAAGTACAAGGTTTCCGA CATTGTCTTCTTCGAGATCCGGCCAGGTGGAGTCTACACCAAAGCTCAATTGCAGAAGGAGCTCGAAACCCTAGCTACTT GCGGAATGTTCGAGAAAGTCGACTTGGAGGGGGAGACCAAGCCCGACGGAACCCACCCTAGGAGTCACCATCTCCTTCGC GGAGAGCACGTGGCATCAAAGCCAATCGAGATGGATGCAGACATGACGGATAAAGAGAAGCTTGAGTATTGCTCAGTGCG AGGTTGTTGCAGAAGATTAGGGACCGTGAATCCACGCCAAGATGAGAAAAAAAACGAAGGGGGCATTATTGTTGAGATCA AACTGAAATGGAGTCTAGTTCCTGGACCTGGAGGACCTCCCACTCTGAATAACAACACCAAGTTTGTCAACGGGGCTGTT GTTGGAGAGAGGAACGTGTTCCAGGTGGATCAAAGATTGGGTATTGGAAGCAAATTCCCTTTCTTCAACCGTCGTCACCA ATTGACATTGACAAGATTCATTCAACTGCAGCAGGTGGAAGAAGGCGCTGGGAAGCCACCGCCACCGGTTCTAGTCCTTC ATGGACATTATGGTGGTTGTGTTGGCGATCTTCCAAGCGACGAAGCCTTTTGTTCTTGGAGGTCCATACTCTGTCCGTGG CTACAACATGGGGGAGCTCGGTGCGGCCAGAAACATCCTCGAGAACACGCATGTGTGTATGCATTTGCTGAGCATTGGAA CGATTTGGGAAGCTCCAAGGACGTGAAAGGGAACCCAACCGCAGTGTATAGGAGAATGGGACAAGGTTCATCATACGGTG TAGGAGTGAAGTTAGGTTTGGTAAGAGCTGAGTATGCTTTAGATCACAACAATGGAACTGGTGCTCTGTTTTTCCGGGTT TGGAGAGAGGTATTAAGGTTAGTGAGAAGGATGTCGAAGCACGAGAAAGAGAAGATGAGGTCTCAAAAGAGTGGAGTTTT AGATATAGCTTATGATGTAGAAGATGTTTTGGACACTTATTTTCTAAAATTCAAAGAAAGATCACAGAGGAAAGGTTTGA TGAGACTGGCCAACAAAATAGGCGAGAAAAAGGATATAGGTGACGATATCAGATCCCTCAAGAGAAGACTTGTCGATATC ACTCGCAAGCGTCAGACTTACGGCATAGGAAGATTCAAAGAGGTAACAAGTTCGAGGAGAAGATTTGAGTATCGCGCCTG GACCTATGTTTCTCAAGATTATAATACACGAGATATGCTTTTAAGAATCATAAGATCTCTAGGAGTTGCTTCTGGTGAAG AGCTTGAAAGGATCAAGATGTTTACAGAGGAGGAGGAGCTAGAAGCTTACCTTCATGATCTTCTAGACGGAAGAAGGTAC TTGGTGGTGGTAGATGATATATGGAAGCAGGACGCGTGGGAGAGCCTAAAGCGAGCCTTACCGTGCAATCATGGAGAAAG TAGAGTCATCATCACTACACGCATCAAAGCTGTGGCTGAAGGCGTGGATGGGAGAGTCTATGTTCATAAGTTAAGGTTTT TGACGTTTGAAGAAAGCTGGAAACTGTTTGACCAGAAAGCATTCATGAATTTTCAATGGGTTGTCGATGAGGATCTGCAT AGAATTGGCAAAGTAATGGTTCAAAAATGCGATGGTTTACCTCTTGCTATAGTCGTTCTTGCTGGGCTATTGTCTAAGAA GAGGCCAAATGAGTGGCATGAGGTGTGTGCCAGTGTCTGGCGATTCCTAAAGGATAACTCTATTCATATATCCACTGTAT TCGATTTAAGTTTCAACGAGCTGCATTATGAGTTGAAACTCTGCTTTCTTTATCTTAGCGTCTTCCCTGAGGACTATGAG ATTGATGTGGAGAAATTAATACACTTACTTGTAGCAGAAGGGTTTATACAAGAGGATGGAGAAATGATGATGGAAGATGT GGCTCGGCATTACATAGAAGAGCTGATAGACATAAGCTTAGTGGAAGCAGTGAGGAGAGAAAGAGGGAAAGTGGTGTTTT GTAGAATCCATGATCTTCTTAGAGACGTGGCTATCAAGAAAGCAAAAGAGATCAACTTTGTAAGTCTTGTTTATAACGAG CATCATTCTTCAACTACTTGCAGAAGAGAAGTGGTACACCATCTTATGGACAACAACTACTTGTGTGACAGACGTGTGAA CAAACGGATGCGGTCCTTCTTGTTCTTCGGAGAGCAGAAGGGAATGCTGGGAAGATACATCCCCTTTATGAGTTTACCAG ATGTGATATGCGAGTCAATACACTTGAGGTATCTTGGTGTAGCTGATACTGGTCTTAGACATTTACCATCTCCCATCTCC AACTTAGAGTTTCTACAAACACTAGATGCATCAGGCAACCGGTTTGAGGGAATGACTGATCTACGTAAGCTCACATCACT AAGGCACCTCATGGGAAGATTCATTGGAGAATTACTAATAGGAGATGCGGTTAACCTTCAGACTTTAAGGTCTATCTCCT CCTATAGCTGGAGTAAGATACAATGTAAGTCACTCAAAAACCTTCGAGACTTGGAGATATATGATTCCGGGTATGTAGAG CTGACAAGAGTTCGTTTAAACTTGAGTTCCTTCTCTAATCTAACAAATCTCCGTGCCTTAACTCTGAGAGTACCGACCTT CAGAATATCATCAGAGGCAGTTGTGTTCCACATGGATGTGTTCTTTCCCAGTCTTGAGTCTTTGACATTTTCCGGAACAA ATCTCGAGGAAGACCCAATGCCTGCTTTGCAGAAACTGCCCAGACTGGAAGATCTAGTCCTGGAAGATTGTGATTGCTCG GAAGTAAAGATGAGCTTCAGTGCACAAGGTTTTGCTCGGCTGAGGAAGCTTGCATTGTTCAGGGTAAGATTAGATTCATT GTGGATAGAAGAAGAAGCCATGCCTAGTTTGATGCATCTGAATCTGGTCAACAGATTAGGACCAAGAACGAAGATGATGA TTCCAGATCGATTCTTGGCACTTGTTAGAGGGTACTAG |
| AA seq | Len:1026 aa MNLCRLCRKGKRNFFFVFGFKKYKVSDIVFFEIRPGGVYTKAQLQKELETLATCGMFEKVDLEGETKPDGTHPRSHHLLR GEHVASKPIEMDADMTDKEKLEYCSVRGCCRRLGTVNPRQDEKKNEGGIIVEIKLKWSLVPGPGGPPTLNNNTKFVNGAV VGERNVFQVDQRLGIGSKFPFFNRRHQLTLTRFIQLQQVEEGAGKPPPPVLVLHGHYGGCVGDLPSDEAFCSWRSILCPW LQHGGARCGQKHPREHACVYAFAEHWNDLGSSKDVKGNPTAVYRRMGQGSSYGVGVKLGLVRAEYALDHNNGTGALFFRV WREVLRLVRRMSKHEKEKMRSQKSGVLDIAYDVEDVLDTYFLKFKERSQRKGLMRLANKIGEKKDIGDDIRSLKRRLVDI TRKRQTYGIGRFKEVTSSRRRFEYRAWTYVSQDYNTRDMLLRIIRSLGVASGEELERIKMFTEEEELEAYLHDLLDGRRY LVVVDDIWKQDAWESLKRALPCNHGESRVIITTRIKAVAEGVDGRVYVHKLRFLTFEESWKLFDQKAFMNFQWVVDEDLH RIGKVMVQKCDGLPLAIVVLAGLLSKKRPNEWHEVCASVWRFLKDNSIHISTVFDLSFNELHYELKLCFLYLSVFPEDYE IDVEKLIHLLVAEGFIQEDGEMMMEDVARHYIEELIDISLVEAVRRERGKVVFCRIHDLLRDVAIKKAKEINFVSLVYNE HHSSTTCRREVVHHLMDNNYLCDRRVNKRMRSFLFFGEQKGMLGRYIPFMSLPDVICESIHLRYLGVADTGLRHLPSPIS NLEFLQTLDASGNRFEGMTDLRKLTSLRHLMGRFIGELLIGDAVNLQTLRSISSYSWSKIQCKSLKNLRDLEIYDSGYVE LTRVRLNLSSFSNLTNLRALTLRVPTFRISSEAVVFHMDVFFPSLESLTFSGTNLEEDPMPALQKLPRLEDLVLEDCDCS EVKMSFSAQGFARLRKLALFRVRLDSLWIEEEAMPSLMHLNLVNRLGPRTKMMIPDRFLALVRGY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein RPP13-like; K13457 disease resistance protein RPM1 (A) |