Names & Information
Knowledge of BnaC09G0125900NO:
| Gene Name | BnaC09G0125900NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3159 nt ATGGCTTCTCTTACTTCTTCATTGTCGACTCGCAACTGGAGTTACAATGTCTTTGCGAGCTTTCACGGGCCTGATGTCCG TAAAACACTTCTCAGCCACATGCGTGAACAGTTTAATGTCAATGGGATCACTATGTATAATGATCAAAAGATGGTGAGAA GCGAAGAGATAGCTCCTTCACTCACAAATGGTATAAGAGAATCTAGGATCGCGATTGTGATTCTCTCCAAGAAATATGCG TTGTCAAGCTGGTGTTTGGATGAATTGGTGGAGATATTGGAGTGCAAAAAATCTATGGGACAGATAGTGATGACCATCTT CTATGGAGTGGAGCCATCTGATGTACGGAAACAGACCGGGGAATTCGGGATCGCTTTCGAGGATACTTGTGAACATAAGA CGAAGGAGGCAAAGCAGAAATGGATCAAAGCTTTGACTAATGTGAGCAACATTGCTGGAGAAGACTTCCTAAGATGGGCA AATGAAGCGGACATGATCAAGCAAATTGCCAGAGACGTTTCAGATAAACTCAATGCTACACCGTCTAGAGACTTTGATGG CATGTTGGGACTTGAACCTCACATAAGAGAATTGAAGTCTTTACTAAATTTAGATGATAATGGAGTTATGATGGTTGCAA TCACTGGTCCTGCGGGCATTGGTAAGACCACCATTGCTAGGGCTTTACAAAATCAAATCTCTAATAGGTTTCAGCTTACT TGTTTTGTGGACAACCTTAGGGAAAACAATCATAGTGGTTTTGATGAACATGGTTGGAAGCTGCGTTTACAGGAGCAATT TCTTTCAAATCTCTTGAATCTTGGTAGAATTAGGATAGGCCATTCTGGTGTGATAGAAGAAAGGCTATCCAAGCATAGGG TGCTCATCATTCTTGATGATGTGTACCATATAAAGCAATTAGAAGCGCTAGCAAATAAAACAACATGGTTTGGTTCTGGA AGCAGGATTATAATTACCACAGAAAACAAAGAGATTTTGCAGCAACATGGTATCAAAAATATGTACCGTGTGGGGCTTCC ATCTGATGAACAAGCGCTCAAGATCTTATGCAGATATGCTTTTGGAAACAACTCTCACAACCAGGGTTTTGAAAAGCTTG TACCAAGAGTGACAAAGCTTTGTGATAACCTTCCGTTGGGTCTAAGTGTTGTGGGTTCATCTTTGCGTGGGAAGGAGGCG GATGAATGGGAAGAGGTACTGAGCAGGCTGGAGACTAATCTTGATCGAGATAGCGGAACTATTCTTGATCGAGATATTGA GGACGTACTAAGAGTGGGCTATGAGAGCTTAGATGAGAATGAGCAAACGCTATTCCTCCACATTGCAGTCTTTTTCAACT ATAAAAGTTGGAATCTCGTGAACACCATGTTCGATGACAGTGACTTGGATGTCAAACATGGGTTGAAGATCCTTGTAAAC AGATCTCTCATCATACAGACCATTGGATATGAGCATAGAATAGTGATGCACAGATTACTAGAACAAATGGGTAAAAAAGC CATTCAAAAACAAGACCCTTGGAAACGCCGGATCTTGATGAATGCTCGGGAGATTTGTGATGTTCTTCAACATGCCAAAG GTACATGGAATGTTCTTGGTATATCTTTTGATATATCAAGAATCAACGAACTATCCATCAGCAAGAAAGCTTTTAAAAGA ATGACTGATCTCCGATTCCTCAAAATTTACAAAAGACAATATGACGGGAATGATAGAATGCATATACCGGAGGAGATTCA GTTTCCGTGCGGACTAAGGTTACTAGATTGGGAAGCATATCCGAGCAAGAGTCTTCCTCCTACGTTCAATCCTCAATATC TTGTTGAACTCAGTATGAAGAATAGCAAGCTCGAGAAGCTATGGGAAGGGATCAAGCAGCTCGCAAATCTCCAGAAGGTA GATTTTTCAGGATCTGTTCATTTGAAGGAACTTCCCGATCTTTCAAATGCTTCAAGTCTTGAGAAGTTGGATCTGATAGG CTGCGAGAGCTTGGTAGAGATTCCATCCTCTTGTTCGAATCTTCATAAACTACAGAAGTTGTGGGTGAGTGGATGCATAA ACCTACAAGTAATTCCAGCTCGCATGAACTTGGCATCCCTTGATGAAGTCTTCATGAGAGGATGCTCAAGGTTGAAAAAC ATTCCAGTCATGTCAACGAACATCAGAAAACTGTGTATATCTGAGACAGCGGTTGAAGATGTGCCTGCATCAACTAAGCT GTGGACTCGTCTTACGTCTCTCAGTATAAACAAAGGTGGAAAGCTAAAGAGATTAACATATCTCCCCAAGAATGTCACAG ATCTAGACCTAAGCTATTCTGATATTCAAAAGATTTCAGATAGTATCAAAGCCCTTCATCAGCTACGGAACCTTAATCTA GCTGGCTGCACAAGACTCGCGTCATTACCAAAGCTCCCTGGCTCGGTCAAAACCATAATAGCGGAAGACTGTGAGTCACT GGAGACCGTATCTAGCTCTTTGAACAATCCAAATGCGCGGCTCAATTTCATCAACTGCTTCAAACTTAGAGGGGCACTCT TACCAGGAACAGAAGTGCCTGAAGAGTTCGATCACCGAGGAAGAGGAACCTCATTGACTATTCGTCCAGACGGTAACCCT TACAGCGGCTTTGTGGTTTGCGTCGTGATTTCTCCTAAGCAGCAAGAGTTTAGTTTTTCCCAGCTAAAGTGTCGTCGCAT AGGCGTAGCTCAAGACGACTTCTATCCAGTTGAAATGTTGGTCTACGTAGGCGAAGTCCACAAGTTTCGAAGGGAGCATC TATTTGTTTTCGACTCTCGGTTTCTAGAGTTCTACCCATCTGATATGAGCAGAGAGATAGTACTCGAGCTGAGCAGCAAC TCCAACGATTTCAATATTATTGACTGTGGTGCCAGGATCTTGACCGACGAGAATGGGAGCAATGAATGTGGCTTAGACGA CCAAGTGTTAGAAGAAGAAACTGAGCTTGAATCTAGCGAAGCCTTTGAAGATAGCATCGAACATTCAAATGAAGCAGCCT GTTACACGGAAGAAGGGGACAATCTAGACGGTGGAAAATGTACTGATTGTTGGAGTTGGCTCTTGCTCTGCTTCGATCTC TCCCATTTGTTGAGATTTGTTTCAGGAAGAAGACGATAA |
| AA seq | Len:1053 aa MASLTSSLSTRNWSYNVFASFHGPDVRKTLLSHMREQFNVNGITMYNDQKMVRSEEIAPSLTNGIRESRIAIVILSKKYA LSSWCLDELVEILECKKSMGQIVMTIFYGVEPSDVRKQTGEFGIAFEDTCEHKTKEAKQKWIKALTNVSNIAGEDFLRWA NEADMIKQIARDVSDKLNATPSRDFDGMLGLEPHIRELKSLLNLDDNGVMMVAITGPAGIGKTTIARALQNQISNRFQLT CFVDNLRENNHSGFDEHGWKLRLQEQFLSNLLNLGRIRIGHSGVIEERLSKHRVLIILDDVYHIKQLEALANKTTWFGSG SRIIITTENKEILQQHGIKNMYRVGLPSDEQALKILCRYAFGNNSHNQGFEKLVPRVTKLCDNLPLGLSVVGSSLRGKEA DEWEEVLSRLETNLDRDSGTILDRDIEDVLRVGYESLDENEQTLFLHIAVFFNYKSWNLVNTMFDDSDLDVKHGLKILVN RSLIIQTIGYEHRIVMHRLLEQMGKKAIQKQDPWKRRILMNAREICDVLQHAKGTWNVLGISFDISRINELSISKKAFKR MTDLRFLKIYKRQYDGNDRMHIPEEIQFPCGLRLLDWEAYPSKSLPPTFNPQYLVELSMKNSKLEKLWEGIKQLANLQKV DFSGSVHLKELPDLSNASSLEKLDLIGCESLVEIPSSCSNLHKLQKLWVSGCINLQVIPARMNLASLDEVFMRGCSRLKN IPVMSTNIRKLCISETAVEDVPASTKLWTRLTSLSINKGGKLKRLTYLPKNVTDLDLSYSDIQKISDSIKALHQLRNLNL AGCTRLASLPKLPGSVKTIIAEDCESLETVSSSLNNPNARLNFINCFKLRGALLPGTEVPEEFDHRGRGTSLTIRPDGNP YSGFVVCVVISPKQQEFSFSQLKCRRIGVAQDDFYPVEMLVYVGEVHKFRREHLFVFDSRFLEFYPSDMSREIVLELSSN SNDFNIIDCGARILTDENGSNECGLDDQVLEEETELESSEAFEDSIEHSNEAACYTEEGDNLDGGKCTDCWSWLLLCFDL SHLLRFVSGRRR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |