Names & Information
Knowledge of BnaC09G0126000NO:
| Gene Name | BnaC09G0126000NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g12650D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3180 nt ATGGCTTCTTCTTCCTCATTTACGTCTCGTAACTACAGCTACAATGTCCTTGCGAGCTTCCACGGTCCTGACGTCCGTAA AACACTTCTCAGTCACATACGTGAACAGTTCACCCACAGCGGGATCACTATGTTTGATGATCAGGAGATTGTGAGAAGCG CAACCATCGCCCCTTCTCTCACAAAAGCTATAAGAGAATCGAGGATCTCGATTGTCATTCTCTCCAAGAACTATGCTTCG TCAAGCTGGTGTTTAAATGAACTGGTGGAGATATTGGAACGCAAGAAAGCTATGGGGCAGATAGTCATGACCATCTTCTA TGGAGTGGATCCATCCGATGTACGGAAACAAACCGGGGAATTCGGGATCGCTTTCAATGAAACTTGTGCAAGTAAGACGG ACGAGGAAAGGCAGAAATGGAGCAAAGCTTTGAACGATGTGGGCAACATTGCTGGAGAAGACTTCTTAAGATGGTCAAAT GAAGCGAAAATGATCAAGAAAATTGCCAGAAATGTTTCAGATAAACTGAATGCTACACAGTCTAGGGATTTTGATGGCAT GGTTGGACTTGAACCTCATTTGAGAGAAATGGAGTCTTTGTTAGATTTCGATGATGATGGAGTTAAGGTGGTCGCAATCT CTGGTCCTGCAGGCATTGGTAAGACTACCATTGCTAGAGCAGTACATAGCTTGCACTCTTATAGGTTCCAACTTACTTGT TTTGTTGACAACCTTAGGGGAAGCCATCCCATCAGTTTTGATGAGTATGGTTTGAAGTTGCGTTTACAAGAAGAGTTTCT TTCGAATATTTTGAAACAAGATGGTATTAGGATATGCCATTTAGGTGTGATAGAAGAAAGGCTACACGACCAGAGAGTTC TCGTCGTTCTTGATGATGTGAACAATATAAAACAATTAGAGGCGTTGGCTGGAGATATTTCTTGGTTTGGTCCTGGAAGT AGGGTTGTGGTTACCACAGAAAACAAAGATCTTCTGCATCAACATGGTATCAACAATACCTACCATGTGGGGTTTCCATC TACAGGAAAAGCTCTTGAGATCCTGTGTGGATATGCTTTTAGAAATAGCTATCCACATGATGGTTTTCAAGAGCTTGCAT TAAAAGTAACTGACCTTTGTGGTAACCTTCCGCTGGGTCTACGTGTGGTGGGTTCATCTTTACGCGGGAAGAAAGAGAAC GAATGGGAAGATGTAATGAAGAGGTTGGAATCTGTTCTTGATCGAGATATTGAGGAAGTACTAAGAGTGGGCTATGAAAG TTTAGATGAGAATGAGCAAACGCTATTTCTCCACATTGCAGTATTCTTCAACTATGAAAACGGCAATCTAGTGAAAACCA TGTTCGCTGAGAGTGACTTGGATGTCAAATACGGGTTAAAAGTCCTTGAAAACAGATCTCTAATAGAGTTATATAACAAG AAGGAAACAATAAATATGCACAGATTACTACAACAAGTGGGTATAAAAGCCATCCATAAACAAGAGCCTTGGAAACGTCG GATCCTGATAGATGCTGCGGAGATACGTGATGTTCTTGAACTCGCCAAAGGAACTAGATTTGTCTCCGGTATATCATTTG ATATATCTGATATCGATGAGGTATCTATAAGCCAAATATCTTTTAAAAGAATGCCAAAACTTCGATTCCTCAGAGTATAC AAAAGCAAAGAAGGTGGGAATGATGTAATTCATATACCTGAGGAGATGGAGCTTCCGAGTCGTCTAAGATTACTAGAGTG GAAGGCATACCCAAACAAGTGTCTTCCTCCTACCTTTCATCCTGAATATCTTGTGAAACTTGATATGCAAGGTAGCCAGC TAGAGTACCTCTGGCAAGGAACCCAGCCGCTTACAAATCTCAAGGAGATAGATTTGCAGAGGTCTTTTCAGTTGAATGAG CTCCCTGATCTCTCAAATGCTACAAATCTTAAAGGATTGTATCTAAGTTATTGCCAGAGCTTGGTAGAGCTTCCACCCTC TTGTTCAAGTCTCGATAAACTAAAGGATTTGTGGATGGATCACTGCAAAAACCTACAAGTCATTCCAGCTCACATGAAAT TGGCATCTCTTAAACGTGTCAGTATGAAAGGATGCTCAAGACTGAGACATATTCCATTTATGTCAACCAACATTAGGCAG ATGGATATATCAGAGACGGCGGTTGAAGATGTGCCTGCATCAACCAGCATTTGCGCTCGTCCTATGGATTACTCCATGAT CGGCTGCCAAAAGCTTAAGGAAATAACACATCTCCCTCTATATGTAACTGAACTAGACCTAAGAAAATCTTCTGTTGAAA AGATTCCAGATTGCATCAAAGATCTTCGTCTACTACTTAAGCTAAAGATCTCTGGATGCAGAAAACTAACGTCAGTGCCA GAGCTTCCTTCTCAGCTCATGCTCCTATCTGCAAACGATTGTGAGTCACTCGAGGAAGTTGCTTCCCCTTTTCAAAACCC GAATGCGAATATGTCTTTCACCAACTGCTTCAGATTGCGACAACAAGCAATTATCCAACAATGGTTCTGTCTCGGGTCTG CTTTCTTACCAGGAAGACAAGTACCTCCAGAGTTCGATCACCGAGCCAGAGGAAGTTCCTTAACTATTCCTGACTCTTCT TTCACCAGATTTAAGGTTTGCCTCGTGCTCTTACCAAACCAGCAAATCAAGGAAGGTAGATCTTCACAACTGTTATGTCG TCGCGTGGTCAACGGCGACTTGGCAAACTCTGATGACAAGTCGTTCAACTTCAACCTATCCAGATGTCGAGCGGAACATC TTTTTATATTTCCCTCTGGTTTGTTTGAAGAAGATGAAGGCCTTCCTGATGAAGTCCACAGAGAGATAGTGTTCGAGTTC AGCAGCAAATACAACGACTTCGACGTTGTTGAATGTGGTGCCAAGTTCTTGACAGACGAAAACAGCTATGAATCTGAATC AGACCAAGCAGCGACAACGATAGCCTCGTTCATGGGAGCTATGAATGTGGATCCAACGCCAATAATAGCATCATTGATGA GATATGAGTCCATAATGGCCGAACAGAGCAATGAAAGAGCTACGGTCCAACTATTCATAGTGAATGTGGATAACCAACAC ACAACTAGTTGTTGCCGCAATATTTCCTCCCTAATCAATTCTGTATATTCTCGAAACTAA |
| AA seq | Len:1060 aa MASSSSFTSRNYSYNVLASFHGPDVRKTLLSHIREQFTHSGITMFDDQEIVRSATIAPSLTKAIRESRISIVILSKNYAS SSWCLNELVEILERKKAMGQIVMTIFYGVDPSDVRKQTGEFGIAFNETCASKTDEERQKWSKALNDVGNIAGEDFLRWSN EAKMIKKIARNVSDKLNATQSRDFDGMVGLEPHLREMESLLDFDDDGVKVVAISGPAGIGKTTIARAVHSLHSYRFQLTC FVDNLRGSHPISFDEYGLKLRLQEEFLSNILKQDGIRICHLGVIEERLHDQRVLVVLDDVNNIKQLEALAGDISWFGPGS RVVVTTENKDLLHQHGINNTYHVGFPSTGKALEILCGYAFRNSYPHDGFQELALKVTDLCGNLPLGLRVVGSSLRGKKEN EWEDVMKRLESVLDRDIEEVLRVGYESLDENEQTLFLHIAVFFNYENGNLVKTMFAESDLDVKYGLKVLENRSLIELYNK KETINMHRLLQQVGIKAIHKQEPWKRRILIDAAEIRDVLELAKGTRFVSGISFDISDIDEVSISQISFKRMPKLRFLRVY KSKEGGNDVIHIPEEMELPSRLRLLEWKAYPNKCLPPTFHPEYLVKLDMQGSQLEYLWQGTQPLTNLKEIDLQRSFQLNE LPDLSNATNLKGLYLSYCQSLVELPPSCSSLDKLKDLWMDHCKNLQVIPAHMKLASLKRVSMKGCSRLRHIPFMSTNIRQ MDISETAVEDVPASTSICARPMDYSMIGCQKLKEITHLPLYVTELDLRKSSVEKIPDCIKDLRLLLKLKISGCRKLTSVP ELPSQLMLLSANDCESLEEVASPFQNPNANMSFTNCFRLRQQAIIQQWFCLGSAFLPGRQVPPEFDHRARGSSLTIPDSS FTRFKVCLVLLPNQQIKEGRSSQLLCRRVVNGDLANSDDKSFNFNLSRCRAEHLFIFPSGLFEEDEGLPDEVHREIVFEF SSKYNDFDVVECGAKFLTDENSYESESDQAATTIASFMGAMNVDPTPIIASLMRYESIMAEQSNERATVQLFIVNVDNQH TTSCCRNISSLINSVYSRN* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |