Names & Information
Knowledge of BnaC09G0126300ZY:
| Gene Name | BnaC09G0126300ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g11490D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3258 nt ATGGCTTCTTCTTCTTCTTCCTCGCTTCGCATATGGAGATACCGCGTCTTCACTAGCTTCCACGGACCCGACGTCCGCAA AACCTTTCTCAGTCATTTACGCAAACAGTTTGGCTGCAATGGGATTTCGATGTTCGATGATCAAGAGATCGAGAGAAGCC ACACCATCGCCCCTGCTCTCAGACAAGCGATTAGAGAATCGAGGATCTCTATCGTGGTGTTAACGAAGAACTATGTTTCT TCCAGCTGGTGTTTGGATGAGCTTTTGGAGATTCTGAAATGCAAGGAAGAGATCGGACAGATAGTGATGGCGATCTTCTA CGGGATAGATCCTTCTCATGTTCGGAAACAGACCGGAGATTTCGGGAAGGTTTTCAAGGAAACATGTCGTGGCAAAACAG AGGAGGAGAAGCAAAGATGGAGTCAAGCTTTGACTGATGTGGGAAACATAGCCGGTGAACACTTCCTTAACTGGTTTGTT TGCTTTTCTTTCCTTCAATTGGATTTAGGATTGTTTCTTTCTTTAATTTACCAAATCAATCTTGTCTCGGTTGTTAGGGT CAACGAATCGGAGATGATTGAAAAGATTGCTAGAGATGTCTCAAACAAACTAAACATTACGATCTCTAGGGATTTTGAAG GCATGGTTGGTATTGAAAAACACTTGGATAAGATGCAATCTTTGTTACATTCAGATGAGGATGGAGCTATGATTGTTGGA ATCTGTGGTCCTGCAGGAATTGGTAAGACTACCATTGCCAGGGCTTTACATAGTAGGCTGTCTAGCACTTTCCAGCTTAC TTGTTTTCTAGAGAATATTCGGGGAAGCTGTAATAGTGGTCTCGACGAGTATGGATTGAAGCTGCGTTTACAAGAGCTAC TTCTTTCCAAGATTTTTAACCAAAACGGTATGAGGATATACCATTTAGGTGCAATACCAGAAAGGCTGTGTGACCAAAAA GTTCTTATCATTCTTGATGACGTCGACGATCTGCAGCAGCTTGAGGCTTTGGCTGATGAAACTAACTGGTTTGGTGATGG AAGCAGGATTATCGTAACCACGGAAGATCAAGAGCTTTTGGAGCTACATGGTATCAGCAATATATACCATGTTGATCTTC CAACTGAAAAAGAGGCTCGTAAGATCTTTTGCAGATATGCCTTTAGACAGAGCTTACCACCATATGGTTATGAAAATCTT GCAGAAAGAGCAACAGAGCTGTGCGGCAATCTTCCTTTTGGTCTCCGTGTCATGGGTTCAATGTTACGCGGAAAGAAAGA AGATGACTGGGAAAGTATATTGTGCAGGCTAGAAAATAGCAATATACCAAAGATCGACGCAGTACTTAGAGTTGGATACG ACAATATACATGAGAGGGATCAAATTCTGTTTCACCTCATTGCAGTATTCTTCAACTACGAAAACGATGGCCATGTGAAA ACAATGCTAGCTGACAGTGGCTTGGATGTTAGACTCGGGTTGAAAACCCTCGCCTACAAATCTCTCATAAAAATATCTAC GGAAGGAGAAATAGTGATGCACAAGTTACTACAACAAGTGGGCAGACAAGCGATTCAAAGACAGGAGCCTTGGAAACGCC AAATTCTAATTGATACTGATGACATTCGCGATGTCCTTGAAAATGATTCTGGTAGTAGAAGCTTGATGGGGATATCTTTA GATATATCTACAATCAAAGACGACATGGATATTAGCGCAAGAGTTTTTAAAAGTATGCGTACTCTTCGATTCCTCAGGGT CTACAACACGAGAAGTGATACAAATGTTAGAGTGCATTTACCCGAGGACATGGAGTTTCCACCTCGTCTGAAGTTATTAC ACTGGGAAGTATATCCGAGGAAGTTTCTTCCTCGTACGTTTTGTCCCGAACATCTTGTGGAACTACATTTGACAGATACC CAGCTTGAGAAATTGTGGGAAGGAACCCAGCCCCTCACAAGTCTCAAGAAGATGGTTTTGGTTTCGTGCTTGTGTCTAAA GGAACTCCCGGATCTAGCAAATGCTACAAATCTCGAAATATTGGATGTGAGTGGATGCCAGAGTTTGGTAGAGATTCATT CCTCTGTTGGAAATCTTCATAGACTGCAGAGTTTGGATATGATTTTCTGTAAAAAGCTACAGGTTGTTCCTACTCTCTTC AACTTGACATCTCTTGAATCACTCGTGATAATGGGATCCTACCAAATGAGGGAACTTCCAGATATTTCCACGACCATCAG AGAACTTTCAATCCCAGAAACAATGTTAGAAGAATTTCTTGAATCAACTAGACTCTGGTCTCATCTTCAGTGTCTCGAGA TATTTGGCTGTGCCATTACAGATCAGTTTATGGCACATCCATCTCAGAGAAATTTGATGCTAGTGCGAAGTGTCACGGGT ATCGAGAGAATTCCAGCCTGTATCAAAAGTCTTCATGGGTTAAAAGAGCTAAGTATATATGGCTGTCCAAAACTTGCATC ACTGCCAGAGATTCCTCGGTCGCTCACAACACTAACAGTATACAAATGTCCATCACTGGAGACACTAGAACCTTTCCCTT TTGGCTCCCGGATTGAGGATCTCTTTTTCCTCGATTGCTTTAGATTGGGTCGAAAAGCAAGGAGACTAATTACCCAACAA TCATCACGGGTATGCCTACCTGGAAGAAATGTACCTGCAGAGTTCCATCACCGGGCTATAGGAAATTTCTTGGCCATATG CTCAAATGCCTACCGATTTAAGATTTGTGCCGTGATTTCCCCTAAACAGGTGATGGTGGAAGATCAAGTTATAGAATTAC TGTGTCACATACTCATAAATGGTTGCCCCATGAAGATCCCCTTGAAAAACATATTTGATCTTGAGATTACAATCCAATTA GAACATCTCATTATATTCCCCTCCACATTGCTTACGGTAGACCGACGGCCTGAGCAGTACAGCGAGATATTGTTTGAATT CAGCACCACATCCCAGGACATCGAAGTTATTGAATGTGGTGTTCAGATCTTGAGGGACAAAACCGACATAAGAAGCAGCT ACGGAAGCTGTGAATCTAATTCAGAACAACTATTGGAATTGGAAGACGACCTTGACTATGATGCACCAAGAGTAGATACC ATTAAGGATTTTGCTAAGTTTCTTTCTTCGCTTCTTATTTTCCTTTTGAGTTTGATTCCAAGTGTTCTTTTTTATAGCTT ACTAAAGCAACGTAAAGACTTTATACGTGATTATTTCACATCTTTCTTTTCCTTCTGA |
| AA seq | Len:1086 aa MASSSSSSLRIWRYRVFTSFHGPDVRKTFLSHLRKQFGCNGISMFDDQEIERSHTIAPALRQAIRESRISIVVLTKNYVS SSWCLDELLEILKCKEEIGQIVMAIFYGIDPSHVRKQTGDFGKVFKETCRGKTEEEKQRWSQALTDVGNIAGEHFLNWFV CFSFLQLDLGLFLSLIYQINLVSVVRVNESEMIEKIARDVSNKLNITISRDFEGMVGIEKHLDKMQSLLHSDEDGAMIVG ICGPAGIGKTTIARALHSRLSSTFQLTCFLENIRGSCNSGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQK VLIILDDVDDLQQLEALADETNWFGDGSRIIVTTEDQELLELHGISNIYHVDLPTEKEARKIFCRYAFRQSLPPYGYENL AERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIDAVLRVGYDNIHERDQILFHLIAVFFNYENDGHVK TMLADSGLDVRLGLKTLAYKSLIKISTEGEIVMHKLLQQVGRQAIQRQEPWKRQILIDTDDIRDVLENDSGSRSLMGISL DISTIKDDMDISARVFKSMRTLRFLRVYNTRSDTNVRVHLPEDMEFPPRLKLLHWEVYPRKFLPRTFCPEHLVELHLTDT QLEKLWEGTQPLTSLKKMVLVSCLCLKELPDLANATNLEILDVSGCQSLVEIHSSVGNLHRLQSLDMIFCKKLQVVPTLF NLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQCLEIFGCAITDQFMAHPSQRNLMLVRSVTG IERIPACIKSLHGLKELSIYGCPKLASLPEIPRSLTTLTVYKCPSLETLEPFPFGSRIEDLFFLDCFRLGRKARRLITQQ SSRVCLPGRNVPAEFHHRAIGNFLAICSNAYRFKICAVISPKQVMVEDQVIELLCHILINGCPMKIPLKNIFDLEITIQL EHLIIFPSTLLTVDRRPEQYSEILFEFSTTSQDIEVIECGVQILRDKTDIRSSYGSCESNSEQLLELEDDLDYDAPRVDT IKDFAKFLSSLLIFLLSLIPSVLFYSLLKQRKDFIRDYFTSFFSF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |