Names & Information

Knowledge of BnaC09G0126500ZY:

Gene Name
BnaC09G0126500ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g11520D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1
NT seq
Len:1476 nt

ATGGTTGGTATTGAAGCACACTTGGATAAGATGCAATCTTTGTTACATTCAGATGAGGATGGAGCTATGTTTGTTGGAAT
CTGTGGCCCTGCAGGCATTGGCAAGACTACCATTGCTAGGGCTTTACATTGCCGATTCGCTAGCGGTTTTCAGCTTACTT
GTTTTATGGAGAATCTTAGAGGAAGCTGTAACAGTGGTATTGACGAGTATGGATTGAAGCTGCGTCTACAAGAGCTACTT
CTTTCCAAGATTTTTAACCAAAACGGTATGAGGATCTACCATTTAGGTGCAATAAAGGAAAGGCTGTGTGACCTTAAAGT
TCTTATTGTTCTTGATGATGTGGACGATCTAAAACAACTTGAGGCTTTGGCTGATGAAACTAACTGGTTTGGTCCTGGAA
GCAGAGTTATCGTAACCACGGAAGACCAAGAGATTTTGGAGCAACATGATATCAGCAATACATACCATGTGGAGTTTCCA
ACTCAAGTTGATGCTCGTCAGATCTTCTGTAGTCTCCTTACAGTGCCACTTTTGGAAACCACGTTGCAAGAATTCTCCGT
CGCTACAGTTGAGAGGATTCCAGATTGGATCAAAGATCTTAATGGGTTGAAGTTTCTTTATATAGCTGGCTGCCCAAAAC
TTGCATCACTGCCAGAGCTCCCTAACTCGCTCAAAAAAGTGACAGTGGACAATTGTGAGTCACTGGAGACGGTATGTTTT
CCTTTTGGCACTCCAACAACCTATTTTCTCTACTTCCCCAACTGCTTCAAGTTGTGCCTAGAAGCGAAGAGAGTAATTAC
ACAGCAATCATTTAGAGCATACTTTCCAGGAAAAGAGATGCCTGCAGAGTTCGATGATCGTCGAGGTGTTGGAAGTTCCT
TGACCATCCGTCCGGCTATCTGCAAGTTTAGGATTTGCCTGGTGCTTTCCCCTAAACCGGATATGGAAGAAGATTATTTC
GAATTAATGTTTCGCATACGCGTAAAAGGTTGTCCCAGTGACGAAGACATGCTTTGCACCTCATCCCATGAAGTCGACGT
TACTGAATGTGGTGTCCAGGTCTTGACAGATGAAACCAACAGAATATATGAATCTTGTTCAGAACAAGTGTCCGAAGACG
GCGATGATATTTTCTCTGATGATAAGAGCAATGGATTTGATGAGCCCAGAGTAAAGATCTCCAAGGCTGCAGCCTTCAGA
AAAGATGGTGACCTGCCATTGTTGAGAAAGGCTCTTGTTGTCCCGGGTTTAGTAGTGATTGAAAATCTAATCCTCTTGGT
AATCTGGAACTTGGAAACTGTGTTAACAAAAGTGTTTGAACCGAGTTCGGTCGGAACTGTACGGTCGTGCCCTAATGGGC
TTGACCTCGATAGGGACGAGCAACTGAGCTTTCGAGCCCAGCTAAAGTGCTTGAGCCGAGCTTGCGCCTTTGATCGGGGA
TCTCTTAGCCAAGCCCAGTGTCCTAGGGCGGCTTAG
AA seq
Len:492 aa

MVGIEAHLDKMQSLLHSDEDGAMFVGICGPAGIGKTTIARALHCRFASGFQLTCFMENLRGSCNSGIDEYGLKLRLQELL
LSKIFNQNGMRIYHLGAIKERLCDLKVLIVLDDVDDLKQLEALADETNWFGPGSRVIVTTEDQEILEQHDISNTYHVEFP
TQVDARQIFCSLLTVPLLETTLQEFSVATVERIPDWIKDLNGLKFLYIAGCPKLASLPELPNSLKKVTVDNCESLETVCF
PFGTPTTYFLYFPNCFKLCLEAKRVITQQSFRAYFPGKEMPAEFDDRRGVGSSLTIRPAICKFRICLVLSPKPDMEEDYF
ELMFRIRVKGCPSDEDMLCTSSHEVDVTECGVQVLTDETNRIYESCSEQVSEDGDDIFSDDKSNGFDEPRVKISKAAAFR
KDGDLPLLRKALVVPGLVVIENLILLVIWNLETVLTKVFEPSSVGTVRSCPNGLDLDRDEQLSFRAQLKCLSRACAFDRG
SLSQAQCPRAA*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0000166
Pfam
NB-ARC domain
KEGG
disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A)