Names & Information
Knowledge of BnaC09G0126600ZY:
| Gene Name | BnaC09G0126600ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g11530D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:2718 nt ATGTTCGACGATCAAGCGATCGAGAGAAGCCAAATCATTGCTCCCGCTCTCACGCAAGCCATTAGAGAATCTAGGATCTC GATCGTGGTGCTGTCGAAGAACTATGCCTCTTCTAGCTGGTGTTTGGATGAACTGTTGGAGATTTTGAAGTGCAAGGAAG ATATGGGACAAATAGTGATGACCATCTTCTACGGTGTAGATCCATCCCATGTGCGGAGACAGACTGGAGAATTCGGGATT GCTTTCAAGGAAACGTGTGCTCATAAAACAGAGGAGGAGAAGCAAAGATGGAGTCAAGCTTTGACTGATGTGGGAAACAT AGCCGGAGAACACTTTCTAAAATGGGACAATGAATCAAACATGATAGAAAAGATTGCTAGAGATGTTTCAAACAAACTAA ATGTTACAATCTCTAGGGGTTTTGAAGACATGGTAGGTATTGAAGCACACTTGGAGAAGATGCAGTCTTTGTTACATTTA GATGATGATGATGATAAGGATGGAGCTATGTTTGTTGCAATATGTGGCCCTGCTGGCATTGGTAAGACTACCATTGCCAG GGCTTTACATAGCAGGCTTTCTAGCAATTTCAAGCTTACTTGTTTTATGGAGAATCTTAGAGGAAGCTGTAACAGTGGTC TTGACGAGTATGGATTGAAGCTGTGCCTACAAGAAAAACTTCTTTTAAAGATTTTTAACCAAAACAGTATGAGGATTTGC CATATAGGAACAATACAAGAAAGGCTATGTGACCAAAAAGTTCTTATTATCCTTGATGATGCTGACGATCTGCAGCAACT TGAGGCTTTGGCTGATGAAACGAACTGGTTTGGTTCTGGAAGTAGGATTATCATAACCACGGAAGATCAAGAGCTTTTGG AGCAACATGGTATCAACAATACATACCATGTGGGCTTTCCAACTGAAATAGATGCTCGTCAGATCTTATGTAGGTCTGCA TTCAAACAGAGCTCTGCGCCACATGGTTTTGAAAATCTTGTCGTTAGAGTAACAAAGCTATGCAGCAACCTTCCACTGGG ACTCCGTGTTGTGGGTTCATCATTACGCGGAAAGAAAGAAGATGACTGGGAAAGTATATCGCATAGGCTAGATAATAACC TTGATCGGAAGATCGATGGAGTACTTAGAGTGGGATACGATAGTTTACTTGAGAACGAGCAATCGCTATTTCTCCACATT GCATTCTTTTTCAACTACCAAGACGATGATCATATCAAAGCCATGCTTGGTGACAGTAATTTGGATGTCACATACGGGTT AAAAACACTGTCCTATAAATCTCTCATTCAAAAATCCACCAAAGGCAAAGTAGTGATGCACAAGTTGCTGCAACAAGTGG CTAGACATGCAGTTCAAAGACAGAAGCCTTGGAAGCGCCAAATCTTAACCGATGCTAGTGAGATCTGTGATGTCCTCGAA ACTAATTATGTTGTTCCGAATCTTTTCTACTTGGCATCTCTTCAAAGGGTGAGGATGTTGGGATGCAGGAAACTGAGAAA AATTCCGCACATGTCCAGGAACATCACAAGACTTACAATCGCAGACACCATGTTAGAAGAAGAGTTTCCTGGATCAATTA GCGCTTGGTCTCGCCTTCGGTGTCTCAATATAAATGGCAGTGTCAATCCATATCCACTTTCGTCAGAACCATTTCCTCCA ATTATGACAGAACCATTTCCAGAGGAAAGTCTAGAAGACGTAGAGAATTTTCCAGACTGTATCAAAGATCTTCATGGATT AATATGGCTGTGTGTAGGTGGCTGTCCAAAAATTACATCACTGCCAGAGCTCCCTCCCTCGCTCAGAACATTGAAGGTGG AAGATTGTGAATCTTTGGAGACACTAATATCTTTTCCTTATGGCTCTCAAATTGAGGAACTCTATTTCCCCAACTGCTTT AAATTGAGTGAAGAAGCGCGGAAAGTAATTGCACAGCAACCATTTCTCGAGATAGCATGTTTACCCGGATGGGAAATACC TGCAGAGTTCGATCACCGAGCTCAAGGAAACTCCTTGACCATCACTTCATCTTTCTGCAGGTTAAGAGTTTGCCTTGTGG TTACCCCTAAACCGCATACCAAAGTAGGTATTGTTGATTTATTGTGTAGCATGAGCTTAAACGGTTGCCCAATTGCCGAA AGCATTGTTACGAGGCTCCCCTATATCCGAGCAGAACATCTATTTATATTTCCCTATGAATTGCTTGACAAAGAAGGATG GCTTGAACAGAACAACGAGATATTGTTCCAATTCAGCACCTCATCCCGTAATATTGATGTTATTGAATGTGGTGTCCAGA TCTTGACGAACAAAACCGGTAGAAAAAGAAGCACCTGTGAAACCTGTGAATCTGTGTCAGAACAAGTGTGTAAAGGCGAC GATGATGAAAGTCTCTCTGATGGGAGATATGAGCAAGGACCGATCTACTGTTCACAGAATGGGGGCTCCTTGCGGAGTCA GTTCTGGCATATGGTTTCTTCAACATCGACTGGCCGGCTTTTTGGCTCTGACGGTGGTCGTTCTTCTCTGGCTCCGGTGA CTCGACCTTCCTTCGGTACTGTCACTGGCTCTGACTATGGCGAACCATCTTCTTCTTTGTTGGTGTCGTCGGGATCTTCT CCGGGTCTTCCCCAGATCTTGCTTGCTCTTCGTTTCCACACTTCTCTTTGTTACAATCATTCCAGATCTCTTAATTGA |
| AA seq | Len:906 aa MFDDQAIERSQIIAPALTQAIRESRISIVVLSKNYASSSWCLDELLEILKCKEDMGQIVMTIFYGVDPSHVRRQTGEFGI AFKETCAHKTEEEKQRWSQALTDVGNIAGEHFLKWDNESNMIEKIARDVSNKLNVTISRGFEDMVGIEAHLEKMQSLLHL DDDDDKDGAMFVAICGPAGIGKTTIARALHSRLSSNFKLTCFMENLRGSCNSGLDEYGLKLCLQEKLLLKIFNQNSMRIC HIGTIQERLCDQKVLIILDDADDLQQLEALADETNWFGSGSRIIITTEDQELLEQHGINNTYHVGFPTEIDARQILCRSA FKQSSAPHGFENLVVRVTKLCSNLPLGLRVVGSSLRGKKEDDWESISHRLDNNLDRKIDGVLRVGYDSLLENEQSLFLHI AFFFNYQDDDHIKAMLGDSNLDVTYGLKTLSYKSLIQKSTKGKVVMHKLLQQVARHAVQRQKPWKRQILTDASEICDVLE TNYVVPNLFYLASLQRVRMLGCRKLRKIPHMSRNITRLTIADTMLEEEFPGSISAWSRLRCLNINGSVNPYPLSSEPFPP IMTEPFPEESLEDVENFPDCIKDLHGLIWLCVGGCPKITSLPELPPSLRTLKVEDCESLETLISFPYGSQIEELYFPNCF KLSEEARKVIAQQPFLEIACLPGWEIPAEFDHRAQGNSLTITSSFCRLRVCLVVTPKPHTKVGIVDLLCSMSLNGCPIAE SIVTRLPYIRAEHLFIFPYELLDKEGWLEQNNEILFQFSTSSRNIDVIECGVQILTNKTGRKRSTCETCESVSEQVCKGD DDESLSDGRYEQGPIYCSQNGGSLRSQFWHMVSSTSTGRLFGSDGGRSSLAPVTRPSFGTVTGSDYGEPSSSLLVSSGSS PGLPQILLALRFHTSLCYNHSRSLN* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |