Names & Information

Knowledge of BnaC09G0126600ZY:

Gene Name
BnaC09G0126600ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g11530D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1
NT seq
Len:2718 nt

ATGTTCGACGATCAAGCGATCGAGAGAAGCCAAATCATTGCTCCCGCTCTCACGCAAGCCATTAGAGAATCTAGGATCTC
GATCGTGGTGCTGTCGAAGAACTATGCCTCTTCTAGCTGGTGTTTGGATGAACTGTTGGAGATTTTGAAGTGCAAGGAAG
ATATGGGACAAATAGTGATGACCATCTTCTACGGTGTAGATCCATCCCATGTGCGGAGACAGACTGGAGAATTCGGGATT
GCTTTCAAGGAAACGTGTGCTCATAAAACAGAGGAGGAGAAGCAAAGATGGAGTCAAGCTTTGACTGATGTGGGAAACAT
AGCCGGAGAACACTTTCTAAAATGGGACAATGAATCAAACATGATAGAAAAGATTGCTAGAGATGTTTCAAACAAACTAA
ATGTTACAATCTCTAGGGGTTTTGAAGACATGGTAGGTATTGAAGCACACTTGGAGAAGATGCAGTCTTTGTTACATTTA
GATGATGATGATGATAAGGATGGAGCTATGTTTGTTGCAATATGTGGCCCTGCTGGCATTGGTAAGACTACCATTGCCAG
GGCTTTACATAGCAGGCTTTCTAGCAATTTCAAGCTTACTTGTTTTATGGAGAATCTTAGAGGAAGCTGTAACAGTGGTC
TTGACGAGTATGGATTGAAGCTGTGCCTACAAGAAAAACTTCTTTTAAAGATTTTTAACCAAAACAGTATGAGGATTTGC
CATATAGGAACAATACAAGAAAGGCTATGTGACCAAAAAGTTCTTATTATCCTTGATGATGCTGACGATCTGCAGCAACT
TGAGGCTTTGGCTGATGAAACGAACTGGTTTGGTTCTGGAAGTAGGATTATCATAACCACGGAAGATCAAGAGCTTTTGG
AGCAACATGGTATCAACAATACATACCATGTGGGCTTTCCAACTGAAATAGATGCTCGTCAGATCTTATGTAGGTCTGCA
TTCAAACAGAGCTCTGCGCCACATGGTTTTGAAAATCTTGTCGTTAGAGTAACAAAGCTATGCAGCAACCTTCCACTGGG
ACTCCGTGTTGTGGGTTCATCATTACGCGGAAAGAAAGAAGATGACTGGGAAAGTATATCGCATAGGCTAGATAATAACC
TTGATCGGAAGATCGATGGAGTACTTAGAGTGGGATACGATAGTTTACTTGAGAACGAGCAATCGCTATTTCTCCACATT
GCATTCTTTTTCAACTACCAAGACGATGATCATATCAAAGCCATGCTTGGTGACAGTAATTTGGATGTCACATACGGGTT
AAAAACACTGTCCTATAAATCTCTCATTCAAAAATCCACCAAAGGCAAAGTAGTGATGCACAAGTTGCTGCAACAAGTGG
CTAGACATGCAGTTCAAAGACAGAAGCCTTGGAAGCGCCAAATCTTAACCGATGCTAGTGAGATCTGTGATGTCCTCGAA
ACTAATTATGTTGTTCCGAATCTTTTCTACTTGGCATCTCTTCAAAGGGTGAGGATGTTGGGATGCAGGAAACTGAGAAA
AATTCCGCACATGTCCAGGAACATCACAAGACTTACAATCGCAGACACCATGTTAGAAGAAGAGTTTCCTGGATCAATTA
GCGCTTGGTCTCGCCTTCGGTGTCTCAATATAAATGGCAGTGTCAATCCATATCCACTTTCGTCAGAACCATTTCCTCCA
ATTATGACAGAACCATTTCCAGAGGAAAGTCTAGAAGACGTAGAGAATTTTCCAGACTGTATCAAAGATCTTCATGGATT
AATATGGCTGTGTGTAGGTGGCTGTCCAAAAATTACATCACTGCCAGAGCTCCCTCCCTCGCTCAGAACATTGAAGGTGG
AAGATTGTGAATCTTTGGAGACACTAATATCTTTTCCTTATGGCTCTCAAATTGAGGAACTCTATTTCCCCAACTGCTTT
AAATTGAGTGAAGAAGCGCGGAAAGTAATTGCACAGCAACCATTTCTCGAGATAGCATGTTTACCCGGATGGGAAATACC
TGCAGAGTTCGATCACCGAGCTCAAGGAAACTCCTTGACCATCACTTCATCTTTCTGCAGGTTAAGAGTTTGCCTTGTGG
TTACCCCTAAACCGCATACCAAAGTAGGTATTGTTGATTTATTGTGTAGCATGAGCTTAAACGGTTGCCCAATTGCCGAA
AGCATTGTTACGAGGCTCCCCTATATCCGAGCAGAACATCTATTTATATTTCCCTATGAATTGCTTGACAAAGAAGGATG
GCTTGAACAGAACAACGAGATATTGTTCCAATTCAGCACCTCATCCCGTAATATTGATGTTATTGAATGTGGTGTCCAGA
TCTTGACGAACAAAACCGGTAGAAAAAGAAGCACCTGTGAAACCTGTGAATCTGTGTCAGAACAAGTGTGTAAAGGCGAC
GATGATGAAAGTCTCTCTGATGGGAGATATGAGCAAGGACCGATCTACTGTTCACAGAATGGGGGCTCCTTGCGGAGTCA
GTTCTGGCATATGGTTTCTTCAACATCGACTGGCCGGCTTTTTGGCTCTGACGGTGGTCGTTCTTCTCTGGCTCCGGTGA
CTCGACCTTCCTTCGGTACTGTCACTGGCTCTGACTATGGCGAACCATCTTCTTCTTTGTTGGTGTCGTCGGGATCTTCT
CCGGGTCTTCCCCAGATCTTGCTTGCTCTTCGTTTCCACACTTCTCTTTGTTACAATCATTCCAGATCTCTTAATTGA
AA seq
Len:906 aa

MFDDQAIERSQIIAPALTQAIRESRISIVVLSKNYASSSWCLDELLEILKCKEDMGQIVMTIFYGVDPSHVRRQTGEFGI
AFKETCAHKTEEEKQRWSQALTDVGNIAGEHFLKWDNESNMIEKIARDVSNKLNVTISRGFEDMVGIEAHLEKMQSLLHL
DDDDDKDGAMFVAICGPAGIGKTTIARALHSRLSSNFKLTCFMENLRGSCNSGLDEYGLKLCLQEKLLLKIFNQNSMRIC
HIGTIQERLCDQKVLIILDDADDLQQLEALADETNWFGSGSRIIITTEDQELLEQHGINNTYHVGFPTEIDARQILCRSA
FKQSSAPHGFENLVVRVTKLCSNLPLGLRVVGSSLRGKKEDDWESISHRLDNNLDRKIDGVLRVGYDSLLENEQSLFLHI
AFFFNYQDDDHIKAMLGDSNLDVTYGLKTLSYKSLIQKSTKGKVVMHKLLQQVARHAVQRQKPWKRQILTDASEICDVLE
TNYVVPNLFYLASLQRVRMLGCRKLRKIPHMSRNITRLTIADTMLEEEFPGSISAWSRLRCLNINGSVNPYPLSSEPFPP
IMTEPFPEESLEDVENFPDCIKDLHGLIWLCVGGCPKITSLPELPPSLRTLKVEDCESLETLISFPYGSQIEELYFPNCF
KLSEEARKVIAQQPFLEIACLPGWEIPAEFDHRAQGNSLTITSSFCRLRVCLVVTPKPHTKVGIVDLLCSMSLNGCPIAE
SIVTRLPYIRAEHLFIFPYELLDKEGWLEQNNEILFQFSTSSRNIDVIECGVQILTNKTGRKRSTCETCESVSEQVCKGD
DDESLSDGRYEQGPIYCSQNGGSLRSQFWHMVSSTSTGRLFGSDGGRSSLAPVTRPSFGTVTGSDYGEPSSSLLVSSGSS
PGLPQILLALRFHTSLCYNHSRSLN*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0000166
Pfam
TIR domain
KEGG
disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A)