Names & Information
Knowledge of BnaC09G0127700ZY:
| Gene Name | BnaC09G0127700ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g11670D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:2610 nt ATGATCGAAAAGATTGCAAGAGATGTTTCAGATAAACTGAATGCCACACCGTCTAGGGATTTTGATGGCATGGTGGGACT TGAAGCTCATTTGAGAGAAATGAGGTCTTTGCTAGATTTAGATAATGACGAAGTTAAGATGGTTGCAGTCTCTGGTCCTG CTGGTATTGGTAAGAGTACCCTTGCTAGAGCTCTGCAAATTCAACTCGCTGATAGGTTTCAGCTTACTTGTTTTGTTGAC AACCTTAGAGTAAGTTATCATAGTGGTCTTGGTGAGTATGGTTTGAAGTTGCGCTTACAAGAAGAATTCCTTTCAAAGGT TTTGAACCAAAATGGTATTAGGATAATCCATTTAGGTGCAATAAAAGAAAGGCTCCGCGACCATACAGTGCTCATCATTC TTGATGATGTGGATGATATAAAGCAGTTAGAGGCTTTGGCTGGTGGAACTACATGGTTTGGTCCTAGAAGTAGGATTGTA ATTATCACAGAAAACAAGGAGATTTTGCAGCAACATGGCATCAACAATACATACCATGTGGAATATCCATCTGATGAAGA CGCTGTTAAGATCTTATGTAGATATGCTTTTAGACAAAACTATCCACTTAATGGTTTTGAAAAGCTTGCCGAAATAGTAA CAGAGCTTTGTGGTAGCCTTCCACTGGGTCTCTGTGTGGTGGGTTCCTCTTTACGTGGGAAAAATGAGGAGGAATGGGAA GAAGTAATACGCAGGCTAGAAACTATTATTGATCATCAAGACATCGAAGAAGTACTAAGAGTCGGCTATGAGAGTTTACA TGAGAACGAGAAATCTCTATTTCTTCACATTGCAGTCTTCTCCAACTTTAAAGACGGTCATCTTGTGGAAGCCATGTTCG CTGACAATAACTTGGATACCAAATACGGGTTGAAAATCCTAGCAAACAAATCACTCATACATGTATTTAACAATGGGGAT ATAGTGATGCACAAGTTACTACGACAAATGGGTAGACAAGCCATTCAGAGACAGGAGCCTTGGAAACGTCAGATCTTAAT TGATCCTCAAGAGATATGTGATGTTCTTGAACGTGCCAACGGTACAAGAATTGTGTCCGGCATATCATTTGATATATCTG ATATTGAAGAAGTGTATATAAGCCCTAGAGCTTTTAAAAGAATGCCTAATCTTCGATTCCTGAGAGTTTACAAAAGTAAA GATATTGATGGGAATGATATAGTGCATATACCTGAGGAGACGGAGTTTCCGCGTGGTCTAAGGTTACTACATTGGAAGGC ATACCCGAGCAAGACTCTTCCTCGTACATTTCATCCTGAATATCTTGTCGAATTCGATATGCAGTTTAGCAAGCTCGAGA AGCTCTGGGAAGGAACTCAGCCACTTAAAAATCTCAGGAAGATGGATTTGTCATGGTCTTCCGAATTAAAGGAGCTCCCT GATCTTTCAAAAGCTGCAGATCTCGAGTTTTTGTTTTTGTATGGTTGCTCCAGTTTGACAGAGATCCCTTCCTCAATCGG AAATCTTGATAAATTAAATTGGTTGGATATGAGTTTCTGTAGAAATCTTCAAGTTGTTCCGACCCGCTTCAACTTGGCAC CTGATGCATTTCTCAATATGAAAGGATGCCCACAATTGAGAAACTTTCCAGAGTTTTCCACCAACATCAGTGCACTAGTC ATTGCAGACACAATGTTAAAAAAGTTGCCTGAAACAGTTACCCTCTGGTCTCCCCACGTGGGTCTTAGTATATACGGCGA TGACGCAGGTATCGAGGAACTTCCAGGCTGGATCAAGGATCTTCATGGGTTAAAATCGCTTAACGTACAAGACTGTTCGA AACTTGCATCACTGCCAGAGCTCCCTGACTCACTCGAAAGACTAATAGCAAACAACTGTGAATCACTGGTGGCCGTAACT CTGGATTTTGACTCTCTAGTATATTGCAATTTCGTCAACTGCTTCAAATTAGGCCGAGAAGCAAGGAGAGTAATCCAGCT GTCAATGAATGCATGTTTACCCGGAAGAAACATACCTGCGGAGTTTGATCACCGAGCTATAGGGAATTCATTGACCATCC GATCACTGAGTTCAGATTCCAGAGTGTTTAGGTTTTGCGTAGTGGTTTCCCCTAAACCACATGTTGAAGTATATGCTGGC AAATTGTTGTGTCGCATGCGCGTAAACCAGGGTTGCTTTATTGACAAGAACATCTCTATGCATTTTCTGGAGACTATCCA AGCGGGACATCTATGCATATGTTACACTGAGTTGGTTCACGAACATGGATGGCTTGAACATGAGGATGAGATAATGTTCG AATTCATCAGCACCTACCCTGAGCTCGACATTGTTGAATGTGGTGTCCATGCGTTGACGGAGGAAAGCGAGATAAGAAGA AGGAAAGAGTTTGATCAAGCCAACAAAGCGTCTCAAGTCTCTTCTCTCAACACTGAAATTACTGATGGACTAATCCGCGA CTCGAAAGAAGACAACAATGGCGAAGCCGAGAATCGTACAGATTGTTGGAACTGTCTCTTCCTCTGCTTTGGTCTCTCCG ACTTTGTGAGAAGAACTGCAAGCTTGTTTTGGGGAAGAAGACAGATATAG |
| AA seq | Len:870 aa MIEKIARDVSDKLNATPSRDFDGMVGLEAHLREMRSLLDLDNDEVKMVAVSGPAGIGKSTLARALQIQLADRFQLTCFVD NLRVSYHSGLGEYGLKLRLQEEFLSKVLNQNGIRIIHLGAIKERLRDHTVLIILDDVDDIKQLEALAGGTTWFGPRSRIV IITENKEILQQHGINNTYHVEYPSDEDAVKILCRYAFRQNYPLNGFEKLAEIVTELCGSLPLGLCVVGSSLRGKNEEEWE EVIRRLETIIDHQDIEEVLRVGYESLHENEKSLFLHIAVFSNFKDGHLVEAMFADNNLDTKYGLKILANKSLIHVFNNGD IVMHKLLRQMGRQAIQRQEPWKRQILIDPQEICDVLERANGTRIVSGISFDISDIEEVYISPRAFKRMPNLRFLRVYKSK DIDGNDIVHIPEETEFPRGLRLLHWKAYPSKTLPRTFHPEYLVEFDMQFSKLEKLWEGTQPLKNLRKMDLSWSSELKELP DLSKAADLEFLFLYGCSSLTEIPSSIGNLDKLNWLDMSFCRNLQVVPTRFNLAPDAFLNMKGCPQLRNFPEFSTNISALV IADTMLKKLPETVTLWSPHVGLSIYGDDAGIEELPGWIKDLHGLKSLNVQDCSKLASLPELPDSLERLIANNCESLVAVT LDFDSLVYCNFVNCFKLGREARRVIQLSMNACLPGRNIPAEFDHRAIGNSLTIRSLSSDSRVFRFCVVVSPKPHVEVYAG KLLCRMRVNQGCFIDKNISMHFLETIQAGHLCICYTELVHEHGWLEHEDEIMFEFISTYPELDIVECGVHALTEESEIRR RKEFDQANKASQVSSLNTEITDGLIRDSKEDNNGEAENRTDCWNCLFLCFGLSDFVRRTASLFWGRRQI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |