Names & Information
Knowledge of BnaC09G0135200ZS:
| Gene Name | BnaC09G0135200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g10760D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=3 SV=1 |
| NT seq | Len:2661 nt ATGGGAAGTTGTATCTCTCTCTCGCTATCATGTGATCAGTGTACGAATCAAGTCTTTCAGTGGTTATGCATCAGAAGGGG TTATATTCACAATCTCGAGGAGAATCTCAAGGCTTTGGAGACAACCATGGAGGAGCTTCAGGCAAATCGGGATGATTTGT CAAAAAGGGCGGAGAGAGAGGAGGGTAAAGGACTAAAAAGGCTTTCCCAAATCCAGGTATGGCTTACGAGAGTCGACACA ATCAAAACACAAGTGAATGCTATATTTAGTGCAATACCTGTTGGAAGTCAAAGGTTGTCTCTCTGTGGGTTTTGCTCTAT GAATTTAAAATCTAGATATCGTTACGGGAAAAGGGTTTTTCTGATGTTGAAGGAGGTTGAGAATCTAAACTCTGGTGGAG ACTTTGAAGTCGTTGCCGAGCAAGCTCAAGCATCGGAGGTAGAGGAGCGGTCTATCCAACCGGGAATTGTTGGTCGGGAC ACGATGCTCAAAAAGGCATGGGACTATCTCATTGAAGATTGTGTTTGTATAATGGGTTTGCATGGCATGGGCGGAGTAGG CAAAACTACATTCCTCACGCAAATCAACAACAAATTTCGACATGATGGATATGTCCGTTTTGATATTGTGATTTGGATTG TGGTCTCTAAAGATTCACATACCCAAAAGATTCAGGATGAAATTGCAAACAAACTAGGCATGGTTGGAGCTGAATGGAAC AAAAAAGATAAAAATCAAAAGGCCTGTGATATACACAATGTCCTTAAGAGGAAAACATTTGTGTTGTTATTGGATGACAT ATGGGAAAAAGTAAATCTATCTGAGATTGGAATCCCATTCCCAAATACAGAAAATGGATGTAAAGTTATTTTCACCACTC GGTCTCAAGAAGTGTGCAGACGCATGGGTGTTAATGTTGAGATGGAAGTCCAATGTCTGGCGCCAAACGATGCATTGGAT TTGTTCCTGAAAAAAGTTGGAGAGGTCACATTACAGAGTCATCCGGACATACCCTATCTTGCAAACATGATTGCTAGAAA GTGTTATGGACTACCTCTAGCGCTTAATGTCATTGGCGAGACTATGTCATGCAAAAGAACGATTCAAGAATGGCAGCATG CAGTTAATGTTTTAACCTCATATGCTGCTGAGTTTTCTGGCATGGAAGATGAGATTCTTCCGATTTTGAAGTATAGTTAC GACAATTTAAAGGACGAGAAGGTCAAGTTGTGTTTACAATATTGCTCTCTGTTTCCGGAAGATGAGAGAATTTACAAAGA TGAACTGGTGAACTATTTGATATTTGAAGGGGTGATAGACGGAGATCAAGGTATAGAAAAAGCTGAGAACCAAGGTTATG AGATCATCGGTACACTTATCCGTGCATCTCTGTTAATTGAAGATGAAAGGAGAGCGTTATATCAAGTGTATATGCATGAT GTTGTACGTGAGATGGCTTTGTGGATTGCTTCTGATTTTGGGAAACAAAAAGACAACTTCATTGTCCGCGGACGTGCAGG TTTATGTGAAACACCCAAGGTTAAAGACTGGAAGGTTGTGAGAAGGAAGTCACTGATGAGTAATAAGATTGCAGATCTCT CTGGCATCCCTGAATGCCTTCATCTTACAACGCTGCTCATGCAGAAAAACGAGGCATTGTCAAATATCTCAAATGGGTTC TTCAGGTTCATGTCAAAGCTAGTTGTATTGGATCTATCATATAACAGAAATCTCTCGGAGTTGCCAGAACAAATATCAGA CTTAGTCTCCTTGCAGTACCTCAACATGTCGAAAACAAATATAGAGTGTCTGCCTCTAGGCTTCCGAGAGTTGAAAAAGT TACGTTACTTGAACTTGGAGTTCACATGGAACCTTTCGAGATTTGTTGGGCTATCAAGCCTGCTGGATTTGAAAGTATTG AGGTTGCGGGGCTCTGGTGTATCATTGGATGTCAGCAAGGTGGAGGAGTTGCAAGTCTTGGAACAATTGGAAATTTTAAC CTTAGGAATTGGTTATGATTCATGTTTGGTTCAGTTTCTAAGCTCTCACAGGCTGATAAGCTGTATTCGAGACTTAGAGA TCAGCGGTCTTCAACTAGAATCATCTGGAATATCGTTTTCAACAACTATGAATAACCTCCAGTATCTCGACTTTCTTGGC TGCACTATCTCCGAGATAAAGATTGATCTGACATATTCTCCTCTGCGGAATCTTATGAGTCCATGCTTCTTGAGTCTCTC TCATGTGTATGTACAAGGTTGTAAAAGCCTAAGGGAGTTGACGTGGCTCATGTTTGCACCAAGTCTTACATATATTGATG TTGAGTTTTCAGAACAGCTAGAATATATAATAAGCAAGGAGAAAGCTAGTGTAGGTGAAGAATCAGGGATTGTTCCTTTT CTAAAGCTGAAATTCTTACGCTTGTCTAATGTACCAGAGCTGAAGAACATATACTGGAGTCCTCTACCATTCCCATGTCT GAAGACAATCATCGCAACCGGATGTCCAAATCTTAAAAGACTTCCTCTCAATTCCAAAAGTGGCTTGGAAGGTGAAAAGG GACTTATCATAAGATACAGAGAAAAAAAATGGATTGAAGGTGTAGAATGGGAGGACGAAGCTACCAAAACTCGCTTCTTA TCTTCATGTGTAAAGGTTTAG |
| AA seq | Len:887 aa MGSCISLSLSCDQCTNQVFQWLCIRRGYIHNLEENLKALETTMEELQANRDDLSKRAEREEGKGLKRLSQIQVWLTRVDT IKTQVNAIFSAIPVGSQRLSLCGFCSMNLKSRYRYGKRVFLMLKEVENLNSGGDFEVVAEQAQASEVEERSIQPGIVGRD TMLKKAWDYLIEDCVCIMGLHGMGGVGKTTFLTQINNKFRHDGYVRFDIVIWIVVSKDSHTQKIQDEIANKLGMVGAEWN KKDKNQKACDIHNVLKRKTFVLLLDDIWEKVNLSEIGIPFPNTENGCKVIFTTRSQEVCRRMGVNVEMEVQCLAPNDALD LFLKKVGEVTLQSHPDIPYLANMIARKCYGLPLALNVIGETMSCKRTIQEWQHAVNVLTSYAAEFSGMEDEILPILKYSY DNLKDEKVKLCLQYCSLFPEDERIYKDELVNYLIFEGVIDGDQGIEKAENQGYEIIGTLIRASLLIEDERRALYQVYMHD VVREMALWIASDFGKQKDNFIVRGRAGLCETPKVKDWKVVRRKSLMSNKIADLSGIPECLHLTTLLMQKNEALSNISNGF FRFMSKLVVLDLSYNRNLSELPEQISDLVSLQYLNMSKTNIECLPLGFRELKKLRYLNLEFTWNLSRFVGLSSLLDLKVL RLRGSGVSLDVSKVEELQVLEQLEILTLGIGYDSCLVQFLSSHRLISCIRDLEISGLQLESSGISFSTTMNNLQYLDFLG CTISEIKIDLTYSPLRNLMSPCFLSLSHVYVQGCKSLRELTWLMFAPSLTYIDVEFSEQLEYIISKEKASVGEESGIVPF LKLKFLRLSNVPELKNIYWSPLPFPCLKTIIATGCPNLKRLPLNSKSGLEGEKGLIIRYREKKWIEGVEWEDEATKTRFL SSCVKV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | putative disease resistance protein At1g63350; K13459 disease resistance protein RPS2 (A) |