Gene Name | BnaC09G0141500ZY |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
NT seq | Len:2655 nt
ATGGCTTCTCTTACTTCTTCATTGTCGACTCGCAACTGGAGTTACAATGTCTTTGCGAGCTTTCACGGGCCTGATGTCCG
TAAAACACTTCTCAGCCACATGCGTGAACAGTTTAATGTCAATGGGATCACTATGTATAATGATCAAAAGATGGTGAGAA
GCGAAGAGATAGCTCCTTCACTCACAAATGGTATAAGAGAATCTAGGATCGCGATTGTGATTCTCTCCAAGAAATATGCG
TCGTCAAGCTGGTGTTTGGATGAATTGGTGGAGATATTGGAGTGCAAAAAATCTATGGGACAGATAGTGATGACCATCTT
CTATGGAGTGGAGCCATCTGATGTACGGAAACAGACCGGGGAATTCGGGATCGCTTTCGAGGATACTTGTGAACATAAGA
CGAAGGAGGCAAAGCAGAAATGGATCAAAGCTTTGACTAATGTGAGCAACATTGCTGGAGAAGACTTCCTAAGATGGGCA
AATGAAGCGGACATGATCAAGCAAATTGCCAGAGACGTTTCAGATAAACTCAATGCTACACCGTCTAGAGACTTTGATGG
CATGTTGGGACTTGAACCTCACATAAGAGAATTGAAGTCTTTACTAAATTTAGATGATAATGGAGTTATGATGGTTGCAA
TCACTGGTCCTGCGGGCATTGGTAAGACCACCATTGCTAGTAGGGCTTTACAAAATCAAATCTCTAATAGGTTTCAGCTT
ACTTGTTTTGTGGACAACCTTAGGGAAAACAATCATAGTGGTTTTGATGAACATGGTTGGAAGCTGCGTTTACAGGAGCA
ATTTCTTTCAAATCTCTTGAATCTTGGTAGAATTAGGATAGGCCATTCTGGTGTGATAGAAGAAAGGCTATCCAAGCATA
GGGTGCTCATCATTCTTGATGATGTGTACCATATAAAGCAATTAGAAGCGCTAGCAAATAAAACAACATGGTTTGGTTCT
GGAAGCAGGATTATAATTACCACAGAAAACAAAGAGATTTTGCAGCAACATGGTATCAAAAATATGTACCGTGTGGGGCT
TCCATCTGATGAACAAGCGCTCAAGATCTTATGCAGATATGCTTTTGGAAACAACTCTCACAACCAGGGTTTTGAAAAGC
TTGTACCAAGAGTGACAAAGCTTTGTGATAACCTTCCGTTGGGTCTAAGTGTTGTGGGTTCATCTTTGCGTGGGAAGGAG
GCGGATGAATGGGAAGAGGTACTGAGCAGGCTGGAGACTAATCTTGATCGAGATAGCGGAACTATTCTTGATCGAGATAT
TGAGGACGTACTAAGAGTGGGCTATGAGAGCTTAGATGAGAATGAGCAAACGCTATTCCTCCACATTGCAGTCTTTTTCA
ACTATAAAAGTTGGAATCTCGTGAACACCATGTTCGATGACAGTGACTTGGATGTCAAACATGGGTTGAAGATCCTTGTA
AACAGATCTCTCATCATAGAGACCATTGGATATGAGCATAGAATAGTGATGCACAGATTACTAGAACAAATGGGTAAAAA
AGCCATTCAAAAACAAGACCCTTGGAAACGCCGGATCTTGATGAATGCTCGGGAGATTTGTGATGTTCTTCAACATGCCA
AAGGTACATGGAATGTTCTTGGTATATCGTTTGATATATCAAGAATCAACGAACTATCCATCAGCAAGAAAGCTTTTAAA
AGAATGACTGATCTCCGATTCCTCAAAATTTACAAAAGACAATATGACGGGAATGATAGAATGCATATACCGGAGGAGAT
TCAGTTTCCGTGCGGACTAAGGTTACTAGATTGGGAAGCATATCCGAGCAAGTGTCTTCCTCCTACGTTCAATCCTCAAT
ATCTTGTTGAACTCAGTATGAAGAATAGCAAGCTCGCGAAGCTATGGGAAGGGATCAAGCCGCTTGCAAATCTCCAGAAG
GTGGATTTTTCAGGATCTGTTCATTTGAAGGAACTTCCCGATCTTTCAAATGCTACAAATCTTGAGAAGTTGGATCTAAT
AGGCTGCGGGAGCTTGGTAGAGATTCCATCCTCTTGTTCGAATCTTCATAAACTACAGAAGTTGTGGGTGAGTGGATGCA
TAAACCTACAAGTAATTCCAGCTCGCATGAACTTGGCATCCCTTGATGAAGTCTTCATGAGAGGATGCTCAAGGTTGAAA
AACATTCCAGTCATGTCAACGAACATCAGAAAACTGTGTATATCTGAGACAGCGGTTGAAGATGTGCCTGCATCAACTAC
GCTGTGGACTCGTCTTACGTCTCTCAGTATAAACAAAGGTGGAAAGCTAAAGAGATTAACATATCTCCCCAAGAATGTCA
CAGATCTAGACCTAAGCTATTCTGATATTCAAAAGATCTCAGATAGTATCAAAGCCCTTCATCAGCTACGGAACCTTAAT
CTAGCTGGCTGCACAAGACTCGCGTCATTACCAAAGCTCCCTGGCTCGGTCAAAACCATAATAGCGGAAGACTGTGAGTC
ACTGGAGACCGTATCTAGCTCTTTGAACAATCCAAATGCGCGGCTCAATTTCATCAACTGCTTCAAACTTAGTCAACAAG
CAAGAAGAGCAATTTTTAAACAATCTTTCTTTACAGGAGGGGCACTCTTACCAGGAACAGAACGGCTTTGTGGTTTGCGT
CGTGATTTCTCCTAA |
AA seq | Len:885 aa
MASLTSSLSTRNWSYNVFASFHGPDVRKTLLSHMREQFNVNGITMYNDQKMVRSEEIAPSLTNGIRESRIAIVILSKKYA
SSSWCLDELVEILECKKSMGQIVMTIFYGVEPSDVRKQTGEFGIAFEDTCEHKTKEAKQKWIKALTNVSNIAGEDFLRWA
NEADMIKQIARDVSDKLNATPSRDFDGMLGLEPHIRELKSLLNLDDNGVMMVAITGPAGIGKTTIASRALQNQISNRFQL
TCFVDNLRENNHSGFDEHGWKLRLQEQFLSNLLNLGRIRIGHSGVIEERLSKHRVLIILDDVYHIKQLEALANKTTWFGS
GSRIIITTENKEILQQHGIKNMYRVGLPSDEQALKILCRYAFGNNSHNQGFEKLVPRVTKLCDNLPLGLSVVGSSLRGKE
ADEWEEVLSRLETNLDRDSGTILDRDIEDVLRVGYESLDENEQTLFLHIAVFFNYKSWNLVNTMFDDSDLDVKHGLKILV
NRSLIIETIGYEHRIVMHRLLEQMGKKAIQKQDPWKRRILMNAREICDVLQHAKGTWNVLGISFDISRINELSISKKAFK
RMTDLRFLKIYKRQYDGNDRMHIPEEIQFPCGLRLLDWEAYPSKCLPPTFNPQYLVELSMKNSKLAKLWEGIKPLANLQK
VDFSGSVHLKELPDLSNATNLEKLDLIGCGSLVEIPSSCSNLHKLQKLWVSGCINLQVIPARMNLASLDEVFMRGCSRLK
NIPVMSTNIRKLCISETAVEDVPASTTLWTRLTSLSINKGGKLKRLTYLPKNVTDLDLSYSDIQKISDSIKALHQLRNLN
LAGCTRLASLPKLPGSVKTIIAEDCESLETVSSSLNNPNARLNFINCFKLSQQARRAIFKQSFFTGGALLPGTERLCGLR
RDFS* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0005515 |
Pfam | Leucine Rich Repeat |
KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |
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