Gene Name | BnaC09G0141700ZY |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaA09g11730D [Brassica napus] |
Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
NT seq | Len:1977 nt
ATGGCTCTTTCATCTTCGCGTAGCTGGAGATATAACGTATTCTTAAGCTTCCACGGGCCTGACGTCCGCAGTTCATATCT
CAGTCACTTACGCAAACAGTTTGAACGCAATGGAATCATAACGTTCAATGATCAAGAGATCGAGAGAAGTCAGACCATTA
AACCCGAGCTCACTCGGGCAATACAAGAATCAAGAATCTCGATTGTGGTGCTCTCCCAGAACTATGCTTCTTCGAGTTGG
TGCTTGAACGAGCTGGAGGAGATTTTGGATTGCAAGGAAACCGGACAGATAGTGATGACAGTTTTCTACAAAGTGAACCC
ATCTGATGTGAGGAAGCAAATCGGAGGATTTGGGAAGGTTTTCAAGAAAACTTGCCAAAGGAAAACGGAGACGGAGATAC
AGAGTTTGACTAAAGCCCTGACGCATGTCGCCAACATAGAAGGAGAACACTCCTTGAACTGGGTAAACGAAGCGGATATG
ATTGAGAAAATTGCCACCGATGTTTCGAACAAACTAAATGCGTCATTGTCAAGGGATTTTGATGGCATGGTGGGACTTGA
AGATCATTTGGAAAAAATGAAGTCTTTGTTACATTTAGAAAACAATGAAGCGATGATTGTTGGAATCTCTGGTCCGGCAG
GCATTGGTAAGACTACCATTGCGAGAGCTTTATTCAATCAACTCTCTTTTTCTTTTCCGCTTAGATATTTTATGGGAAAT
GTTAAGGGGAGTTATAGGAGAACTGATTGTGATGAGCATGGCTTGAAGCTGCGTTTACAAGAACAACTACTTAAGAAAAT
TTTGAACCAAAAAAGAATGAAGATAAGTCACTTAAATGTAATATACGAAAGGCTAGGCAACCAAAAGGTTCTCATCATTC
TTGATGACGTGGATCATCTTGAGCAGATTATTGTGACAACGGAAGATCGAGAGCTTTTGCAGCAACATGGTATCAACAAT
GTATACAATGTGGCTTTTCCATCTAGTGAAGAAGCTCTTGGGATCTTTTGTCTATCTGCTTTCAAACAAATTTCTCCACC
TAATGGTTTTGGGAGGCTTGCGGAACGAGCAGCAGAGCTTTGCAGTAATCTTCCCTTGGGTCTCTGCGTTGTGGGTTCAT
CTTTGCTTGATAAATCTCTCATATGTATATCTACCAATGGGGATATACAGATGCACAAGTTACTACAACAAGTGGGTACA
CAAGAAATTAAAAGACAAGAGCCTTGGAAACGACACATCTTAATTGACCCTTATGAGATTTGTGATGTCCTTCAATCTAG
CACAGGTACTGGTACTGTGATGGGTATATCTTTTGATATAACTGAAATCAGCAAAGTGTCTATAAGCAAGAAAACCTTTA
GAAGAATGTGTAATCTCCGATTCCTCAGAGTTTACAAAAGCAGAATTGATAGAGATGTTGAAGTGCACATACCAGAGGAG
ATGGAGTTTCCACATGGACTGAGGTTTCTACATTGGAAGCCATACCCAAGCAAGTGTCTCCCTTCTACGTTTCACCCTGA
ATATCTTGTGGAACTCGATATGCAGCATAGCCAGCTCGAAAAGCTTTGGGAAGGAACCCAGCCGCTTGCAAATCTCAAGA
AGATGAATTTGTCAGGGTCATGGGATTTGAAAGAGGTTCCAGATCTTTCAAATGCCACGAACCTCGAGTTATTGGATCTG
AGCGGCTGCATGAGTTTGGTAGAGATTCCATCCTCTATTTCAAATCTTCATAAACTACAGGAACTGATGATGATGTTCTG
CATAAACCTAGAAGTAATTCCAGAGGGGTTGAACTTGATGTCTATTGAAACAGTCAATATGGTGGGGTGCTTACGATTAA
GAACCTTTACCCAAAGTTTCATGCCTTTCAACCTAAGACATATTTTTCTTACCAGCTGCGAGAAACTCCAATCATTGCCA
GACACTGTTTCTACTGAACTCATAACCCTAATTGCGAACAATTGCCAGTCACTCTAA |
AA seq | Len:659 aa
MALSSSRSWRYNVFLSFHGPDVRSSYLSHLRKQFERNGIITFNDQEIERSQTIKPELTRAIQESRISIVVLSQNYASSSW
CLNELEEILDCKETGQIVMTVFYKVNPSDVRKQIGGFGKVFKKTCQRKTETEIQSLTKALTHVANIEGEHSLNWVNEADM
IEKIATDVSNKLNASLSRDFDGMVGLEDHLEKMKSLLHLENNEAMIVGISGPAGIGKTTIARALFNQLSFSFPLRYFMGN
VKGSYRRTDCDEHGLKLRLQEQLLKKILNQKRMKISHLNVIYERLGNQKVLIILDDVDHLEQIIVTTEDRELLQQHGINN
VYNVAFPSSEEALGIFCLSAFKQISPPNGFGRLAERAAELCSNLPLGLCVVGSSLLDKSLICISTNGDIQMHKLLQQVGT
QEIKRQEPWKRHILIDPYEICDVLQSSTGTGTVMGISFDITEISKVSISKKTFRRMCNLRFLRVYKSRIDRDVEVHIPEE
MEFPHGLRFLHWKPYPSKCLPSTFHPEYLVELDMQHSQLEKLWEGTQPLANLKKMNLSGSWDLKEVPDLSNATNLELLDL
SGCMSLVEIPSSISNLHKLQELMMMFCINLEVIPEGLNLMSIETVNMVGCLRLRTFTQSFMPFNLRHIFLTSCEKLQSLP
DTVSTELITLIANNCQSL* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0000166 |
Pfam | Leucine Rich Repeat |
KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |
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