Names & Information
Knowledge of BnaC09G0142500ZY:
| Gene Name | BnaC09G0142500ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g11650D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:3159 nt ATGTCCTCTCTCATGTCTTTTTCTTCCTCTTCTTCTCCCTCTCGGCCACGCACATGGAGATACAGTGTCTTCACGAGCTT CCACGGACCAGACGTCCGTAAAACCTTTCTCAGTCATCTACGCAAACAGTTCAACACCAACGGGATCTCGATGTTCGATG ATCAAGGGATTGAGAGAGGCCAAACCATTGCCCCTGAACTCATACGAGCCACTAGGGAGTCGAGGATCTCGATCGTGGTG CTCTCGAAGAACTATGCATCTTCCAGCTGGTGTTTAGATGAACTGGTGGAGATTTTCAAGTGCAAGGAAGATAAGAACCA AATAGTGATGACGGTTTTTTACGGTGGAGTAGATCCATCCGATGTGCGGAAACAAACAGGAGATTTTGGGAAAGTTTTCA AGAAAACTTGTACACGTAAAACCGAAGAGGAGAGGCGTAAATGGAGTCAAGCTTTGACCGATGCTGGCAACATAGCCGGT GAACACTTTCTTAACTGGGACAATGAATCGGAGATGATTGAAAAGATTGCTAGAGATGTTTCCAACAAATTAAATGCTAC AATTGTCTCTAACGATTTTGAAGACATGGTGGGTATTGAAGCGCATCTGGAGAAGATGCAGTCTTTGTTACATTTAGATG ATGAGGATGGAGTGATGCTTGTTGGAATCTGTGGCCCTGCTGGAATTGGCAAGACTACAATTGCCAGAGCTTTATATAGC CGACTTTCTAGCACTTTCCAGCTTTCCTGTTTTATGGAGAATCTTAGAGAAAGCTGTAACAGTGGTGGTCTTGACGAGTA TGGATGGAAGCTGCGTTTACAAGAGCTACTTCTTTCAAAGATTCTAAACCAAAATGGTATAAAGATAAACCATTTAGGTA TGATGATGCAAAGGCTCTGTGACCAAAAAGTTTTTATCATTCTTGATGATGTGGATGATCTGCAGCAACTTGAAGCCTTG GCTAATGACACTAACTGGTTTGGTCATGGAAGCAGAATTATCGTAACCACGGAAGATCAAGAGCTTTTGGAGCAACATGG TATCAACAATACATACCATGTGGACTTTCCACCTAAAGAAAATGCTCGTAAGATCCTTTGCAGATATGCTTTTAAACAAA GCTGGGCACCATATGGTTTCGAAAATCTTGCCGAAAGAGCAACGGAGCTTTGTAGTAACCTTCCATTGGGTCTCAGAGTC ATGGGTTCAATGTTACGCGGAAAGAAAGAAGATGACTGGGAAAGTATGTTGCAAAGGCTAGAAAAAAGCAGTATATCAAA GATCGATGCATTACTGAGAGTTGGATTTGACAGTTTACATGAGAGCGATCAAACTATATTTCTCCTCATTGCAGTCTTCT TCAATTACGAAGATGATGGTCATGTGAAAACAATGCTCGCTGACAGTGGCTTGGATGTCAGACTTGGGTTGAAAACTCTC GCCTATAAATCTCTCATACATTTATCGACCAAAGGAGAAATAGTGATGCACAAGTTACTAAAACAAGTGGGTATACAGGC GATTCAAAGACAGGAGCCTAGGAAACGCCAAATCCTAATTGATACTGATAATATTCTCGATGCTCTTGAAAACGATTTTG GTAATAGAAGTTTGATGGGGATATCTTTTGATATATCTACAATCAAAGACAGCATGGATATAAGCCCAAGAGCTTTGAAA AGAATGCGCAATCTTCGATTTCTCTGGATCTACAACTCAAGATGGGATACAAATGTTAGAGTGCATGTACCCGAGGACAT GGATTTTCCACCTCGTCTGAAGTTATTACATTGGGAGGAATATCCAGGAAAGTGTCTTCCTCATACACTTAGGCCGGAAA ATCTAGTGAAACTCTATTTAGAAGAGATCAAGCTCAAGCATTTGTGGAAAGGAACCCAGCCTCTTGGGAATCTCAAGAAG CTGAATTTGAATTCGTCTTATAATTTGGAGGAACTCCCAGATCTTGGGAATGCTACAAATCTGGAGATTTTGGATGTGTG TAAATGCCAGAGTTTGGTAGAGATTCATTCCTCAGTTGGAAATCTTCATAAACTAGAGAAGTTGAAGATGAATTACTGTG GAAAGCTACAGGTTGTTCCGAGTCTCTTCAACTTGGCATCTCTTCAGTCAGTCTCGATAGCAGGATGCTATCAATTGAGG AAATTTCCAGATATTTCGGCGACCATCACAGAACTCAAAATCGTAGACACAATGTTAGAAGAATTAACTGCATCAATTAG GCTCGGGTCTCGTCTTGAGGATCTCTATATAGTTGGCAGTGTCATTCCAAATGAATATTTTTTGACACATCCACATGTGG CAAGATTGATGCTAGAGAGAAGTGGCGCAGATATTGAGAGACTTCCAGATTGCATCAAAGATCTTCATTGTTTAGAAGAT CTTTTTATAATCGGATGTCCAAAGCTTGTATCACTGCCAGAGCTTCCTAGGTCGCTCACGAGACTAGTAGTATGGAATTG TGAATCACTGGAGACGCTTGTACCTTTCCCTTCCGACTCTCAGATTTTCATTCTCTTTTTCCCCAACTGCTTCAAATTGG GTCCAGAAGCAAGGAGAGTAATTATCCAGCAGCGATCATGTCATCAATTCTTACCTGGAAGAGATATACCTGCAGAGTTC ACTCACCGGGCTATAGGAAAATCCTTGACCATCACTTCAAATGCCTGCGGCGGATTTAAGATGTGTGTCATCTTTTCCCC TAAATCAGAGATGGGAGATGCTATTGATATAGACTTAATGTGTCGCATAAGCATAAATGGTTGCCCTAAGGAAAATTGCA TAGTTTCTCTTCTCGGTGGAGTTCGATCAGAACATCTAGCTATATTTTACTCAGAAATTCTTAGGGAATACGACGAAGTT GAACAGTACAGCGAGATGTTGTTCGAATTCAGCAGCTCAACCCAGGAAATCGAAATTATTGAATGTGGTGTCCAGATCCT GGTAGAAGAAACCAGTTCAGAACAAGTGTTGGACAACGACAATGGAAGTCTCGCTGATGAGAGCTTTGAGTTGGATGCAT CACGAGTAAAGATCATTGATGATTTGCATGGGAGCCTTGAATTTGATGCATCAAGAGTAGATACTGATGATGCTTTGCTA GGTTTATTTGCTCCCACTTTTTTTTCCTTCGGATTCTGA |
| AA seq | Len:1053 aa MSSLMSFSSSSSPSRPRTWRYSVFTSFHGPDVRKTFLSHLRKQFNTNGISMFDDQGIERGQTIAPELIRATRESRISIVV LSKNYASSSWCLDELVEIFKCKEDKNQIVMTVFYGGVDPSDVRKQTGDFGKVFKKTCTRKTEEERRKWSQALTDAGNIAG EHFLNWDNESEMIEKIARDVSNKLNATIVSNDFEDMVGIEAHLEKMQSLLHLDDEDGVMLVGICGPAGIGKTTIARALYS RLSSTFQLSCFMENLRESCNSGGLDEYGWKLRLQELLLSKILNQNGIKINHLGMMMQRLCDQKVFIILDDVDDLQQLEAL ANDTNWFGHGSRIIVTTEDQELLEQHGINNTYHVDFPPKENARKILCRYAFKQSWAPYGFENLAERATELCSNLPLGLRV MGSMLRGKKEDDWESMLQRLEKSSISKIDALLRVGFDSLHESDQTIFLLIAVFFNYEDDGHVKTMLADSGLDVRLGLKTL AYKSLIHLSTKGEIVMHKLLKQVGIQAIQRQEPRKRQILIDTDNILDALENDFGNRSLMGISFDISTIKDSMDISPRALK RMRNLRFLWIYNSRWDTNVRVHVPEDMDFPPRLKLLHWEEYPGKCLPHTLRPENLVKLYLEEIKLKHLWKGTQPLGNLKK LNLNSSYNLEELPDLGNATNLEILDVCKCQSLVEIHSSVGNLHKLEKLKMNYCGKLQVVPSLFNLASLQSVSIAGCYQLR KFPDISATITELKIVDTMLEELTASIRLGSRLEDLYIVGSVIPNEYFLTHPHVARLMLERSGADIERLPDCIKDLHCLED LFIIGCPKLVSLPELPRSLTRLVVWNCESLETLVPFPSDSQIFILFFPNCFKLGPEARRVIIQQRSCHQFLPGRDIPAEF THRAIGKSLTITSNACGGFKMCVIFSPKSEMGDAIDIDLMCRISINGCPKENCIVSLLGGVRSEHLAIFYSEILREYDEV EQYSEMLFEFSSSTQEIEIIECGVQILVEETSSEQVLDNDNGSLADESFELDASRVKIIDDLHGSLEFDASRVDTDDALL GLFAPTFFSFGF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |