Names & Information
Knowledge of BnaC09G0145100ZS:
| Gene Name | BnaC09G0145100ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g11670D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:2310 nt ATGATCGAAAAGATTGCAAGAGATGTTTCAGATAAACTGAATGCCACACCGTCTAGGGATTTTGATGGCATGGTGGGACT TGAAGCTCATTTGAGAGAAATGAGGTCTTTGCTAGATTTAGATAATGACGAAGTTAAGATGGTTGCAGTCTCTGGTCCTG CTGGTATTGGTAAGAGTACCCTTGCTAGAGCTCTGCAAATTCAACTCGCTGATAGGTTTCAGCTTACTTGTTTTGTTGAC AACCTTAGAGTAAGTTATCATAGTGGTCTTGGTGAGTATGGTTTGAAGTTGCGCTTACAAGAAGAATTCCTTTCAAAGGT TTTGAACCAAAATGGTATTAGGATAATCCATTTAGGTGCAATAAAAGAAAGGCTCCGCGACCATACAGTGCTCATCATTC TTGATGATGTGGATGATATAAAGCAGTTAGAGGCTTTGGCTGGTGGAACTACATGGTTTGGTCCTAGAAGTAGGATTGTA ATTATCACAGAAAACAAGGAGATTTTGCAGCAACATGGCATCAACAATACATACCATGTGGAATATCCATCTGATGAAGA CGCTGTTAAGATCTTATGTAGATATGCTTTTAGACAAAACTATCCACTTAATGGTTTTGAAAAGCTTGCCGAAATAGTAA CAGAGCTTTGTGGTAGCCTTCCACTGGGTCTCTGTGTGGTGGGTTCCTCTTTACGTGGGAAAAATGAGGAGGAATGGGAA GAAGTAATACGCAGGCTAGAAACTATTATTGATCATCAAGACATCGAAGAAGTACTAAGAGTCGGCTATGAGAGTTTACA TGAGAACGAGAAATCTCTATTTCTTCACATTGCAGTCTTCTCCAACTTTAAAGACGGTCATCTTGTGGAAGCCATGTTCG CTGACAATAACTTGGATACCAAATACGGGTTGAAAATCCTAGCAAACAAATCACTCATACATGTATTTAACAATGGGGAT ATAGTGATGCACAAGTTACTACGACAAATGGGTAGACAAGCCATTCAGAGACAGGAGCCTTGGAAACGTCAGATCTTAAT TGATCCTCAAGAGATATGTGATGTTCTTGAACGTGCCAACCCACTTAAAAATCTCAGGAAGATGGATTTGTCATGGTCTT CCGAATTAAAGGAGCTCCCTGATCTTTCAAAAGCTGCAGATCTCGAGTTTTTGTTTTTGTATGGTTGCTCCAGTTTGACA GAGATCCCTTCCTCAATCGGAAATCTTGATAAATTAAATTGGTTGGATATGAGTTTCTGTAGAAATCTTCAAGTTGTTCC GACCCGCTTCAACTTGGCACCTGATGCATTTCTCAATATGAAAGGATGCCCACAATTGAGAAACTTTCCAGAGTTTTCCA CCAACATCAGTGCACTAGTCATTGCAGACACAATGTTAAAAAAGTTGCCTGAAACAGTTACCCTCTGGTCTCCCCACGTG GGTCTTAGTATATACGGCGATGACGCAGGTATCGAGGAACTTCCAGGCTGGATCAAGGATCTTCATGGGTTAAAATCGCT TAACGTACAAGACTGTTCGAAACTTGCATCACTGCCAGAGCTCCCTGACTCACTCGAAAGACTAATAGCAAACAACTGTG AATCACTGGTGGCCGTAACTCTGGATTTTGACTCTCTAGTATATTGCAATTTCGTCAACTGCTTCAAATTAGGCCGAGAA GCAAGGAGAGTAATCCAGCTGTCAATGAATGCATGTTTACCCGGAAGAAACATACCTGCGGAGTTTGATCACCGAGCTAT AGGGAATTCATTGACCATCCGATCACTGAGTTCAGATTCCAGAGTGTTTAGGTTTTGCGTAGTGGTTTCCCCTAAACCAC ATGTTGAAGTATATGCTGGCAAATTGTTGTGTCGCATGCGCGTAAACCAGGGTTGCTTTATTGACAAGAACATCTCTATG CATTTTCTGGAGACTATCCAAGCGGGACATCTATGCATATGTTACACTGAGTTGGTTCACGAACATGGATGGCTTGAACA TGAGGATGAGATAATGTTCGAATTCATCAGCACCTACCCTGAGCTCGACATTGTTGAATGTGGTGTCCATGCGTTGACGG AGGAAAGCGAGATAAGAAGAAGGAAAGAGTTTGATCAAGCCAACAAAGCGTCTCAAGTCTCTTCTCTCAACACTGAAATT ACTGATGGACTAATCCGCGACTCGAAAGAAGACAACAATGGCGAAGCCGAGAATCGTACAGATTGTTGGAACTGTCTCTT CCTCTGCTTTGGTCTCTCCGACTTTGTGAGAAGAACTGCAAGCTTGTTTTGGGGAAGAAGACAGATATAG |
| AA seq | Len:770 aa MIEKIARDVSDKLNATPSRDFDGMVGLEAHLREMRSLLDLDNDEVKMVAVSGPAGIGKSTLARALQIQLADRFQLTCFVD NLRVSYHSGLGEYGLKLRLQEEFLSKVLNQNGIRIIHLGAIKERLRDHTVLIILDDVDDIKQLEALAGGTTWFGPRSRIV IITENKEILQQHGINNTYHVEYPSDEDAVKILCRYAFRQNYPLNGFEKLAEIVTELCGSLPLGLCVVGSSLRGKNEEEWE EVIRRLETIIDHQDIEEVLRVGYESLHENEKSLFLHIAVFSNFKDGHLVEAMFADNNLDTKYGLKILANKSLIHVFNNGD IVMHKLLRQMGRQAIQRQEPWKRQILIDPQEICDVLERANPLKNLRKMDLSWSSELKELPDLSKAADLEFLFLYGCSSLT EIPSSIGNLDKLNWLDMSFCRNLQVVPTRFNLAPDAFLNMKGCPQLRNFPEFSTNISALVIADTMLKKLPETVTLWSPHV GLSIYGDDAGIEELPGWIKDLHGLKSLNVQDCSKLASLPELPDSLERLIANNCESLVAVTLDFDSLVYCNFVNCFKLGRE ARRVIQLSMNACLPGRNIPAEFDHRAIGNSLTIRSLSSDSRVFRFCVVVSPKPHVEVYAGKLLCRMRVNQGCFIDKNISM HFLETIQAGHLCICYTELVHEHGWLEHEDEIMFEFISTYPELDIVECGVHALTEESEIRRRKEFDQANKASQVSSLNTEI TDGLIRDSKEDNNGEAENRTDCWNCLFLCFGLSDFVRRTASLFWGRRQI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |