Gene Name | BnaC09G0158000ZY |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaC09g51410D [Brassica napus] |
Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
NT seq | Len:1587 nt
ATGTTGAACCAAAATGATATGAGGATAAGCCATCTGGGTGCTTTAAAAGAAAGGCTCTGCGACCACAGAGTGCTCATCAT
TCTTGATGATGTGAACAGTATAAAGCAATTAGAGGCGTTGGCTAATGAAACTACATGGTTTGGCCCTGGAAGTAGGATTG
TAGTTACCACAGAAAATAATGAGCTTATGCAGCAACATGGTATCAACTATACGTACCATGTGGTGTTTCCATCTGATGAA
CAAGCTCTCAAAATCTTGTGTAGATATGCTTTTAGGCAAAGCTATCCACATATTTGTTTCAAAGAGCTTGCGTTGAGAGT
AACAAAGCTTTGTGGTAATCTTCCATTGGGTCTCCGTGTGGTGGGTTCATCTTTACGTGGGAAGAATGAGGAGGAGTGGG
AAGAGGTAATACTCAAGCTAGATACTATTCTTGATCATCAAGACATCGAGGAAGTACTAAAAGTCGGTTATGAGAGTTTA
CATGAGAATGAACTATCTCTATTTCTCCATATTGCTGTCTTCTTCAACTATAATGATGTTGATTTTGTGAAATCCATGTT
CGCTGACAATAATTTGGATATCAAACACGGGTTGAAAATCCTGGTCAGCAGATCTCTCATACATGTATCTACTGATGGAG
AAATAGTGATGCACAAGTTACTACAACAAGTGGGTAGAAAAGCTGTTCGTAGAGAAGAACCATGGAAATGCAGGATCTTA
ATAGAGACTCCAGATATCTGTGATGTTCTCGAACGTGCCAAAGGTTCTAGAGCTGTATCTGGCATATTATTTGACATATC
TGATATCGATGAGGTATCTATCAGCAGTAGAGCTTTTAAAAGAATGCCTAATCTTCGATTCCTCAAGATTTACAAAAGTA
AAGAAGGTGGAAATGATATAGAGAATATACCTGAGGACATAGAGTTTCCACCTCGTTTAAGGTTACTACATTGGGAGGCA
TACCCAAACAAATGTCTCCCTCCTACATTTCATCCTGAATATCTTGTTCAACTCAATTTAAGAGATAACGAGCTAGAGAA
GCTCTGGGAAGGAACCCAGAGACTTCAAAATCTGCAGAAGTTGGATTTGTTTGGATCCTTGAATTTCAAGGAACTCCCGG
ATCTTTCAAATGCATCAAATCTTGACAGTTTGGATCTGAGTGGTTGCGAGAGTTTGGTAGAGATCCCTTCCTCTTTTAGA
AATCTTCATAAACTAAAGCAGTTGACGATGTTGTTGTGCATAAAGTTACAAGTTGTTCCAGATCACTTCAACTTGGCATC
TCTTACATCAGTAGTCATGGTGGGATGCTGGAAACTGAGAAAACTCCCTGGTATTTCCAGGAATATCACGTCACTCTCAA
TCGCAGACACAATGCTAGAAGAATTGCCTGAATCAGTAAGGCTTTGGTCTCGCCTTGAGACGCTCTCAATATATGGCAGT
CTCAACATATCACCAATTTGGTTAGACCGGTGGCAAGAGCGAAAAGGCGCAGATATTGTAACAATTCCAGACTGGATCAA
AGATCTTCATGGGTTAACATGGCTTCATGGGTTGTCCAAAACTTGCGTTACTGCCAGAGCTTCCTAG |
AA seq | Len:529 aa
MLNQNDMRISHLGALKERLCDHRVLIILDDVNSIKQLEALANETTWFGPGSRIVVTTENNELMQQHGINYTYHVVFPSDE
QALKILCRYAFRQSYPHICFKELALRVTKLCGNLPLGLRVVGSSLRGKNEEEWEEVILKLDTILDHQDIEEVLKVGYESL
HENELSLFLHIAVFFNYNDVDFVKSMFADNNLDIKHGLKILVSRSLIHVSTDGEIVMHKLLQQVGRKAVRREEPWKCRIL
IETPDICDVLERAKGSRAVSGILFDISDIDEVSISSRAFKRMPNLRFLKIYKSKEGGNDIENIPEDIEFPPRLRLLHWEA
YPNKCLPPTFHPEYLVQLNLRDNELEKLWEGTQRLQNLQKLDLFGSLNFKELPDLSNASNLDSLDLSGCESLVEIPSSFR
NLHKLKQLTMLLCIKLQVVPDHFNLASLTSVVMVGCWKLRKLPGISRNITSLSIADTMLEELPESVRLWSRLETLSIYGS
LNISPIWLDRWQERKGADIVTIPDWIKDLHGLTWLHGLSKTCVTARAS* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0005515 |
Pfam | Leucine Rich Repeat |
KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |
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