Names & Information
Knowledge of BnaC09G0159800ZS:
| Gene Name | BnaC09G0159800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g12560D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:2802 nt ATGGCTTCTTCATCGCGTCGCACCTGGAGATACCGCGTTTTCACGAGCTTCCATGGACCAGACGTCCGTAAAACGTTTCT CAGTCACTTGCGCAAACAGTTTAGCTGCAATGGAATTACGATGTTCGATGATCAAGGGATCGAGAGAAGTCATATTATTG CTCCTGCACTCACGCAAGCGATCAGAGAATCGAGGATCTCCATTATCGTGCTCTCGAAGAACTATGCTTCTTCCGGATGG TGTTTGGATGAGCTGTTGGAGATTTTGAAGTGCAAGGAAGATATTGGACAAATCGTGATGACTGTCTTCTACGGAGTAGA TCCAGCTGATGTACGGAAACAGACCGGACATTTTGGGAGGGCTTTCAAGGAAACATGTGATCGTCGTAAAACAAAGGAGA AGGAGGAAAGATGGAGTCAAGCTTTGGAGTACGTGGGCAACATAGCCGGAGAACACCTCATAAACTGGGTCAATGAAGCG GCTATGGTTGACAAAATTGCTACCGATGTTTCCAACAAACTAAATGCAACACCATCTAAGGATTTTGATGGCATAGTGGG ATTGGAAGCTCATTTGAGAGAAATTGAGTCTTTGCTCGATTTAGATAATGATGAAGTTAAGATGGTAGCAATCACGGGAC CTGCAGGGATTGGTAAGAGTACCATTGCCAGAGCGTTGCATAGTCTATTGTCGAATAGGTTTCAGCTTACTTGTTTTGTA GACAACCTTAGGGTAACCTATCCTACAGGTTTTGATGAGTATGGTTTGAAGTATCGTTTACAAGAAGAGCTGCTTTCGAA TATTTTTAAACAAGATGGTATTAGGATATGCCATTTAGGTGTTATAGAAGAAAGGCTACACGACCAAAGAGTGCTCATCA TTCTTGATGATGTGAACAATATAAGACAACTGGAGGCGTTGGCTGGAGATATTACTTGGTTTGGTCCTGGAAGTAGGGTT GTAGTTACCACAGAAAACAAAGAGCTTCTGCAGCGGCATGGTATCAACAATACATACCATGTGGAGTTTCCATCTAGAGG AGAAGCTCTTGAGATTTTTTGTAGATATGCTTTTAGACAAAGCTATCCACATGATCGTTTTAAAGTGCTTGCATTCAAAG TGACGAAGCTGTGTGGCAATCTTCCATTGGGTCTGCGAGTGGTGGGTTCATCTTTACGCGGGAAGAAAGTGGATGAATGG GAAGACGTGATGAACAGGCTAGAAACTATTCTTGATCATCAAGATATCGAGCAAGTACTAAGAGTCGATTATGAGAGTTT ACATGAGACAGAGCAATCTCTATTTCTCCACATTGCAGTCTTCTTCAACCGTAATGATGCTGATCTTGTGAAAGCCATGT TCACTGACAATAGCTCGGATATCAAACACGGGTTAAAAATCCTGGTCAATAGATCTCTCATAGATGTATCTACCAAAGGA GAAATAGTGATGCACAAGTTACTACAACAAGTGGGTAGACAGGTCGTTCACAAAGAAGCGCCTTGGAAACGCCGGATCTT AACAGACGCTCAAGTGATTTGTGATGTTCTTGAACGAGCCAAAATGTGTCCAAGAGCTTTTAAAAGGATGCCTAATCTGC GATTCCTCAAAGTTTACAAAAGTAAAGATGATGGAAATGATTTATTGCATATACCTGAGGAGACGGAGTTTCCGCGTCGT CTAAGGTTACTACATTGGAAGGCATACCCGAGAAAGAGTCTCCCTCTTCGATTTTACCTGGAAAATCTTGTGGAGCTCAA AATGCGACACAGCCACCTCCAAAAGCTCTGGGAAGGAACTCAGGCACTTACAAATCTGAAGAAAATGGATTTGTCCTGGT CTTTTAATTTAAAGGAACTCCCGGATTTTTCAAATACTACAATGCTCGAGAGTTTGGTACTGCGTGGTTGCAAGAATTTG GTAGAGATTCACTCCTCTATTGGGAATCTTCGCAAAATTGAGTTCCTGCAAATGAGTTTTTGCGTAAAGCTACAAGTTGT TCCGGCTCTCTTCAATTTGGCACCTCTTGCTTTTGTTGGAATGGAAGGATGCTCACAACTGAGAAACTTCTCAGATATTT CCACGAACATCAGAACACTCTCAATCGCCGACACAATGTTAGAAAAAATTTCTAAATCAACCGTATCTCTTGCTTTTGAC TCTGAATCAAGCTGCAGCATCACCAACTGCTTCAAATTGGGTCGAGAAGCAAGGAGAGTAATCCAGCTATCATTGCGGGC ATGCCTACCTGGAAGAAAAATACCTGCCAAGTTTGATCACAGAACTATAGGAAACGCCTTGACCATCCGGTCAGATTTCA GAGAATTTAGGTTTTGCATTGTGGTTTCCCGTAAACAGTATATTGGCGAACTCAAACCCGAGTTTTTCTGTCGCATTCGC GTAAACAAGGGTTGCCCCACTGACCATCACATTCATTTCCATCTCCGCAATATCCGGGCGGAACATCTATGTTTTTCTTT GGTTGACGTGCATGGATGGCTTGAACAGGGGAATGAGATTATGTTTGAATTCATCACATGCCAGGAGCTCGAGATTATTG CATGTGGTGTCCAGATCATGACGGAGGAAAGCAAGAGAAGAAGAATGATTGAGTTTGATGAAGCCAGCAAAGCCTCTCAA GACTCTAGAGACAGTGAGCTTAGGGATCGACTAATCTGTGATTCGAAAGAAAATGGCAAAGCCGAGACATCTACAGGTTG CTGGAGCTGGATCCTCCTCTCCTTGGACCTCTCCCATCCTATGAGAAGCATTGCAAGCTTATTTTGGGGAAGAAGACCAT AG |
| AA seq | Len:934 aa MASSSRRTWRYRVFTSFHGPDVRKTFLSHLRKQFSCNGITMFDDQGIERSHIIAPALTQAIRESRISIIVLSKNYASSGW CLDELLEILKCKEDIGQIVMTVFYGVDPADVRKQTGHFGRAFKETCDRRKTKEKEERWSQALEYVGNIAGEHLINWVNEA AMVDKIATDVSNKLNATPSKDFDGIVGLEAHLREIESLLDLDNDEVKMVAITGPAGIGKSTIARALHSLLSNRFQLTCFV DNLRVTYPTGFDEYGLKYRLQEELLSNIFKQDGIRICHLGVIEERLHDQRVLIILDDVNNIRQLEALAGDITWFGPGSRV VVTTENKELLQRHGINNTYHVEFPSRGEALEIFCRYAFRQSYPHDRFKVLAFKVTKLCGNLPLGLRVVGSSLRGKKVDEW EDVMNRLETILDHQDIEQVLRVDYESLHETEQSLFLHIAVFFNRNDADLVKAMFTDNSSDIKHGLKILVNRSLIDVSTKG EIVMHKLLQQVGRQVVHKEAPWKRRILTDAQVICDVLERAKMCPRAFKRMPNLRFLKVYKSKDDGNDLLHIPEETEFPRR LRLLHWKAYPRKSLPLRFYLENLVELKMRHSHLQKLWEGTQALTNLKKMDLSWSFNLKELPDFSNTTMLESLVLRGCKNL VEIHSSIGNLRKIEFLQMSFCVKLQVVPALFNLAPLAFVGMEGCSQLRNFSDISTNIRTLSIADTMLEKISKSTVSLAFD SESSCSITNCFKLGREARRVIQLSLRACLPGRKIPAKFDHRTIGNALTIRSDFREFRFCIVVSRKQYIGELKPEFFCRIR VNKGCPTDHHIHFHLRNIRAEHLCFSLVDVHGWLEQGNEIMFEFITCQELEIIACGVQIMTEESKRRRMIEFDEASKASQ DSRDSELRDRLICDSKENGKAETSTGCWSWILLSLDLSHPMRSIASLFWGRRP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |