Names & Information
Knowledge of BnaC09G0159900ZS:
| Gene Name | BnaC09G0159900ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g12570D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:2937 nt ATGGCGTCTGCTTCTTCCTTTGCGTCTCGCAACTACAAGTTCAACGTCTTCTCGAGCTTCCACGGGCCTGACGTCCGTAA AACACTTCTCAGTCACATGCGCGAGCAATTTAAACGCAGCGGGATCACAATGTTTAATGATCAAGAGATTGTGAGAAGCC AAGAGATAGCTCCTTTGCTCACAAATGGTATAAGAGAATCAAAGATCTCGATCGTGATTCTCTCCAAGAAAAACGCTTCT TCAAGCTGGTGTTTAGATGAATTGGTGGAGATACTGAAGTGCAAGGAAACTATGGGACAGATAGTGATGACCATCTTTTA CGGAGTGGAACCATCCGATGTACGCTTCCAGACCGGCGATTTTGGGATCGCTTTCAATGAAACTTGTGCAGATAAGCCGG ACGAGGAAAGGCAGAAGTGGAGCAAAGCTTTGAAAAACGTAGGAAACATTGCTGGAGAAGACTTCCAAAAATGGGATTTT GATGGCATGGTGGGACTTGAGACTCATTTAAGGGAAATGGAGAATTTGCTAGATTTTGATTATGATGGAGTAAAGATGGT TGGAATCTCAGGTCCTGCAGGGATTGGTAAGACAACCATTGCCAGAGACTTACATAGTCGTTTCTCTCATAAGTTTCAGC TTACTTGTTTTACGGAAAACCTTAGGGGAAGCTATCCTAGTAGTGGTCTTGATGACTATGGTCTGCAGTTTCTTTTACAA GAACAACTTCTGTCAAAGGTTTTGAACCAAGATGGTACAAGGATATGCTATCTAGGTGTGTTACAACAAAGGCTAAGTAA CTTGAGAGTGCTCATCATTCTTGATGATGTAACCAGTCTAAAGCAATTAGAGGCTTTGGCTGGAGATACTTCTTGGTTTG GTTTTGGAAGTAGGATAATGTATACCATATATGCTTTCAAACAATGCTATCCTACAGAGGGTTTTAAAAAGCTTGCTATA AGGATAACAGAACTTTGTTGCAAGCTTCCGTTGGCTCTTCGTGTTGTGGGTTCATCTCTACGTGGGAAGAGGAAGGACGA ATGGACAGATGTAATGGTCAGGCTAGAAAATATTCTTGATCAAGATATCGAGAAAGTGTTAAAAATTGGCTACGAAAGTT TAGAAGACAATGAGCAAACACTATTTCTCTATATTGCAATCTTCTTCAAGTATAAAGATGGTGATCTTGTGAAAACCATG CTGGCTGGAATTGACTTGGATGTTAAAAACGGGTTGAAAATCCTAGTAAAAAAATCTCTCATAGAGATATCTGCACGTGG TGAAATAGTGATGCACAGATTACTACAAGTGGGTAAAAGAGCTATTCGTAGACTAAAGCCTTGGAATCGCCAAATCTTAG TTGATGCTAATGACATATGTGATGTCCTACAAAATGATACTGTGAGTCTATTAATCCTTTGCTTCTTAGTAACTTTTTTA AAAAATATTTGCCTGAGCAACAAAGTGGTTGGCATATCATTTAATACATCAGCAATCAACGAAGTGTTCATAAGCAAGGG AGCTTTCAAAGGAATGCCTAATCTCAGGTTTCTACATTGGAAGGCATACCCAAGCAAGTGTCTTCCTGCTACATTTAATT CGGAATGTCTTGTCGAACTTGATCTTCGAGAAAGCCAATTAGAAAAGCTTTGGGAAGGAATCCAGGAACTCCCAGACCTT TCAAATGCTCCAAATCTTGAGAAACTGAAACTGGGTGGTTGCCAGAGTTTGATAGAGCTTCCCCCCACTACTTCAAATCT TGGTAAACTAAATTACTTGTGTATGATTTCCTGCACAAAGCTAGAAGTTGTTCCAAGTAACTGCACCTTTGCGTCCCCTA ATCCCATTGACATACAAATATCGCGTACGAACATGACAACATTCGGTATGTCAGTCCCAGCGGCAAAAGAAGTGCCTCCA GTGACTACCCTTTCGATTTCTCGTGAGTTCTCTCTTTGTCTAAGCGAAAATCCAAATCTGAAGACACTAACACAACTGCC GGCTACTATAACTACACTAGACCTAAGCTTCTCTGGTATTGAAACAATATGCTGCCTAAAAGGTTTACACATGTTAAGAG AAATTAGACTCTTTGACTGCACAGAACTCAAATCACTGCCAGAGCTCCCTTGTTTTCTCAAGTCTCTAAACACAAATTAT TGTGAATCACTGGAGACCGTTCCTTGCCCTTTGATGACACCATTTGCGAAGCTCAGTTTCACCAACTGCTTCAAACTGGA CCAACAAGCACGAAATGAAATTGCCAACCAACGCTTTCATCTGCTTCAGTTGGGGTGGTCATGGTTACCTGGAACCCAAG TCCCCGCAGAGTTCGAGCACCGAGCCATAGGAAATACCTTGAGCTTCCCTATCTCCGCCCTCTCCATATTTAAGGTGTGC CTCGTTTGTTCGTCTAACAACCTAGCTGATATATATGATAAGTACTACTTGTCTTGTCGCTGGATGCGCAAAGGCTACTC AAACTCCTTCCAAGCTATCGAGATATATGGATTCTTCATCTCATCATATCAACACAAGCATCTCTTAGTTTTTCCCTCCT ACTTACTTCTCAAGTACGGATGCTTTGAAGAGAGTGGAGAGCTAACGTTTGAATTCACCAGCGTCGACTTCGACGTTATT GAATGTGGTGTCCATATATTCAAGGAGGAACTCGACGGAAGCAACAATGGAGGTTCTGGCGACGAAGATGGTGACAGTAA CCACTGGAACACACAGGAATCCGGCCAAGATTCAGATGAAGACGAAGAAGCTGATATTATCAGTGACACAATATCTGAAT CTGGACCCAGCGAAGCCTCTGGTGGAGATGGCGTTGAAGAAGACTACATATCTGTATCCAGGAAACGTGCCATGAACACG ACGATGACAGGTGCTTCTATAAATCTGAAATGGGGAACCAAAAGACGACGTTTTTGA |
| AA seq | Len:979 aa MASASSFASRNYKFNVFSSFHGPDVRKTLLSHMREQFKRSGITMFNDQEIVRSQEIAPLLTNGIRESKISIVILSKKNAS SSWCLDELVEILKCKETMGQIVMTIFYGVEPSDVRFQTGDFGIAFNETCADKPDEERQKWSKALKNVGNIAGEDFQKWDF DGMVGLETHLREMENLLDFDYDGVKMVGISGPAGIGKTTIARDLHSRFSHKFQLTCFTENLRGSYPSSGLDDYGLQFLLQ EQLLSKVLNQDGTRICYLGVLQQRLSNLRVLIILDDVTSLKQLEALAGDTSWFGFGSRIMYTIYAFKQCYPTEGFKKLAI RITELCCKLPLALRVVGSSLRGKRKDEWTDVMVRLENILDQDIEKVLKIGYESLEDNEQTLFLYIAIFFKYKDGDLVKTM LAGIDLDVKNGLKILVKKSLIEISARGEIVMHRLLQVGKRAIRRLKPWNRQILVDANDICDVLQNDTVSLLILCFLVTFL KNICLSNKVVGISFNTSAINEVFISKGAFKGMPNLRFLHWKAYPSKCLPATFNSECLVELDLRESQLEKLWEGIQELPDL SNAPNLEKLKLGGCQSLIELPPTTSNLGKLNYLCMISCTKLEVVPSNCTFASPNPIDIQISRTNMTTFGMSVPAAKEVPP VTTLSISREFSLCLSENPNLKTLTQLPATITTLDLSFSGIETICCLKGLHMLREIRLFDCTELKSLPELPCFLKSLNTNY CESLETVPCPLMTPFAKLSFTNCFKLDQQARNEIANQRFHLLQLGWSWLPGTQVPAEFEHRAIGNTLSFPISALSIFKVC LVCSSNNLADIYDKYYLSCRWMRKGYSNSFQAIEIYGFFISSYQHKHLLVFPSYLLLKYGCFEESGELTFEFTSVDFDVI ECGVHIFKEELDGSNNGGSGDEDGDSNHWNTQESGQDSDEDEEADIISDTISESGPSEASGGDGVEEDYISVSRKRAMNT TMTGASINLKWGTKRRRF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |