Names & Information
Knowledge of BnaC09G0160400ZS:
| Gene Name | BnaC09G0160400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3138 nt ATGGCTTCTCTTACTTCTTCATTGTCGACTCGCAACTGGAGTTACAATGTCTTTGCGAGCTTTCACGGGCCTGATGTCCG TAAAACACTTCTCAGCCACATGCGTGAACAGTTTAATGTCAATGGGATCACTATGTATAATGATCAAAAGATGGTGAGAA GCGAAGAGATAGCTCCTTCACTCACAAATGGTATAAGAGAATCTAGGATCGCGATTGTGATTCTCTCCAAGAAATATGCG TCGTCAAGCTGGTGTTTGGATGAATTGGTGGAGATATTGGAGTGCAAAAAATCTATGGGACAGATAGTGATGACCATCTT CTATGGAGTGGAGCCATCTGATGTACGGAAACAGACCGGGGAATTCGGGATCGCTTTCGAGGATACTTGTGAACATAAGA CGAAGGAGGCAAAGCAGAAATGGATCAAAGCTTTGACTAATGTGAGCAACATTGCTGGAGAAGACTTCCTAAGATGGGCA AATGAAGCGGACATGATCAAGCAAATTGCCAGAGACGTTTCAGATAAACTCAATGCTACACCGTCTAGAGACTTTGATGG CATGTTGGGACTTGAACCTCACATAAGAGAATTGAAGTCTTTACTAAATTTAGATGATAATGGAGTTATGATGGTTGCAA TCACTGGTCCTGCGGGCATTGGTAAGACCACCATTGCTAGTAGGGCTTTACAAAATCAAATCTCTAATAGGTTTCAGCTT ACTTGTTTTGTGGACAACCTTAGGGAAAACAATCATAGTGGTTTTGATGAACATGGTTGGAAGCTGCGTTTACAGGAGCA ATTTCTTTCAAATCTCTTGAATCTTGGTAGAATTAGGATAGGCCATTCTGGTGTGATAGAAGAAAGGCTATCCAAGCATA GGGTGCTCATCATTCTTGATGATGTGTACCATATAAAGCAATTAGAAGCGCTAGCAAATAAAACAACATGGTTTGGTTCT GGAAGCAGGATTATAATTACCACAGAAAACAAAGAGATTTTGCAGCAACATGGTATCAAAAATATGTACCGTGTGGGGCT TCCATCTGATGAACAAGCGCTCAAGATCTTATGCAGATATGCTTTTGGAAACAACTCTCACAACCAGGGTTTTGAAAAGC TTGTACCAAGAGTGACAAAGCTTTGTGATAACCTTCCGTTGGGTCTAAGTGTTGTGGGTTCATCTTTGCGTGGGAAGGAG GCGGATGAATGGGAAGAGGTACTGAGCAGGCTGGAGACTAATCTTGATCGAGATAGCGGAACTATTCTTGATCGAGATAT TGAGGACGTACTAAGAGTGGGCTATGAGAGCTTAGATGAGAATGAGCAAACGCTATTCCTCCACATTGCAGTCTTTTTCA ACTATAAAAGTTGGAATCTCGTGAACACCATGTTCGATGACAGTGACTTGGATGTCAAACATGGGTTGAAGATCCTTGTA AACAGATCTCTCATCATAGAGACCATTGGATATGAGCATAGAATAGTGATGCACAGATTACTAGAACAAATGGGTAAAAA AGCCATTCAAAAACAAGACCCTTGGAAACGCCGGATCTTGATGAATGCTCGGGAGATTTGTGATGTTCTTCAACATGCCA AAGGTACATGGAATGTTCTTGGTATATCGTTTGATATATCAAGAATCAACGAACTATCCATCAGCAAGAAAGCTTTTAAA AGAATGACTGATCTCCGATTCCTCAAAATTTACAAAAGACAATATGACGGGAATGATAGAATGCATATACCGGAGGAGAT TCAGTTTCCGTGCGGACTAAGGTTACTAGATTGGGAAGCATATCCGAGCAAGTGTCTTCCTCCTACGTTCAATCCTCAAT ATCTTGTTGAACTCAGTATGAAGAATAGCAAGCTCGCGAAGCTATGGGAAGGGATCAAGCCGCTTGCAAATCTCCAGAAG GTGGATTTTTCAGGATCTGTTCATTTGAAGGAACTTCCCGATCTTTCAAATGCTACAAATCTTGAGAAGTTGGATCTAAT AGGCTGCGGGAGCTTGGTAGAGATTCCATCCTCTTGTTCGAATCTTCATAAACTACAGAAGTTGTGGGTGAGTGGATGCA TAAACCTACAAGTAATTCCAGCTCGCATGAACTTGGCATCCCTTGATGAAGTCTTCATGAGAGGATGCTCAAGGTTGAAA AACATTCCAGTCATGTCAACGAACATCAGAAAACTGTGTATATCTGAGACAGCGGTTGAAGATGTGCCTGCATCAACTAC GCTGTGGACTCGTCTTACGTCTCTCAGTATAAACAAAGGTGGAAAGCTAAAGAGATTAACATATCTCCCCAAGAATGTCA CAGATCTAGACCTAAGCTATTCTGATATTCAAAAGATCTCAGATAGTATCAAAGCCCTTCATCAGCTACGGAACCTTAAT CTAGCTGGCTGCACAAGACTCGCGTCATTACCAAAGCTCCCTGGCTCGGTCAAAACCATAATAGCGGAAGACTGTGAGTC ACTGGAGACCGTATCTAGCTCTTTGAACAATCCAAATGCGCGGCTCAATTTCATCAACTGCTTCAAACTTAGTCAACAAG CAAGAAGAGCAATTTTTAAACAATCTTTCTTTACAGGAGGGGCACTCTTACCAGGAACAGAAGTGCCTGAAGAGTTCGAT CACCGAGGAAGAGGAACCTCATTGACTATTCGTCCAGACGGTAACCCTTACAGCGGCTTTGTGGTTTGCGTCGTGATTTC TCCTAAGCAGCAAGAGTTTAGTTTTTCCCAGCTAAAGTGTCGTCGCATAGGCGTAGCTCAAGACGACTTCTATCCAGTTG AAATGTTGGTCTACGTAGGCGAAGTCCACAAGTTTCGAAGGGAGCATCTATTTGTTTTCGACTCTCGGTTTCTAGAGTTC TACCCATCTGATATGAGCAGAGAGATAGTACTCGAGCTGAGCAGCAACTCCAACGATTTCAATATTATTGACTGTGGTGC CAGGATCTTGACCGACGAGAATGGGAGCGATGAATGTGGCTTAGACGACCAAGTGTTAGAAGACGAAACTGAGCTTGGAC CTGCCGAAGCATTTGAATATGGCCTCGAACATACAAATGAAGCAGTCTGTTACTCGGAAGAAGTGGACGGTGGAAAACGT ACTGATTGTTGGAGTTAG |
| AA seq | Len:1046 aa MASLTSSLSTRNWSYNVFASFHGPDVRKTLLSHMREQFNVNGITMYNDQKMVRSEEIAPSLTNGIRESRIAIVILSKKYA SSSWCLDELVEILECKKSMGQIVMTIFYGVEPSDVRKQTGEFGIAFEDTCEHKTKEAKQKWIKALTNVSNIAGEDFLRWA NEADMIKQIARDVSDKLNATPSRDFDGMLGLEPHIRELKSLLNLDDNGVMMVAITGPAGIGKTTIASRALQNQISNRFQL TCFVDNLRENNHSGFDEHGWKLRLQEQFLSNLLNLGRIRIGHSGVIEERLSKHRVLIILDDVYHIKQLEALANKTTWFGS GSRIIITTENKEILQQHGIKNMYRVGLPSDEQALKILCRYAFGNNSHNQGFEKLVPRVTKLCDNLPLGLSVVGSSLRGKE ADEWEEVLSRLETNLDRDSGTILDRDIEDVLRVGYESLDENEQTLFLHIAVFFNYKSWNLVNTMFDDSDLDVKHGLKILV NRSLIIETIGYEHRIVMHRLLEQMGKKAIQKQDPWKRRILMNAREICDVLQHAKGTWNVLGISFDISRINELSISKKAFK RMTDLRFLKIYKRQYDGNDRMHIPEEIQFPCGLRLLDWEAYPSKCLPPTFNPQYLVELSMKNSKLAKLWEGIKPLANLQK VDFSGSVHLKELPDLSNATNLEKLDLIGCGSLVEIPSSCSNLHKLQKLWVSGCINLQVIPARMNLASLDEVFMRGCSRLK NIPVMSTNIRKLCISETAVEDVPASTTLWTRLTSLSINKGGKLKRLTYLPKNVTDLDLSYSDIQKISDSIKALHQLRNLN LAGCTRLASLPKLPGSVKTIIAEDCESLETVSSSLNNPNARLNFINCFKLSQQARRAIFKQSFFTGGALLPGTEVPEEFD HRGRGTSLTIRPDGNPYSGFVVCVVISPKQQEFSFSQLKCRRIGVAQDDFYPVEMLVYVGEVHKFRREHLFVFDSRFLEF YPSDMSREIVLELSSNSNDFNIIDCGARILTDENGSDECGLDDQVLEDETELGPAEAFEYGLEHTNEAVCYSEEVDGGKR TDCWS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |