Names & Information
Knowledge of BnaC09G0160600ZS:
| Gene Name | BnaC09G0160600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g11730D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:1977 nt ATGGCTCTTTCATCTTCGCGTAGCTGGAGATATAACGTATTCTTAAGCTTCCACGGGCCTGACGTCCGCAGTTCATATCT CAGTCACTTACGCAAACAGTTTGAACGCAATGGAATCATAACGTTCAATGATCAAGAGATCGAGAGAAGTCAGACCATTA AACCCGAGCTCACTCGGGCAATACAAGAATCAAGAATCTCGATTGTGGTGCTCTCCCAGAACTATGCTTCTTCGAGTTGG TGCTTGAACGAGCTGGAGGAGATTTTGGATTGCAAGGAAACCGGACAGATAGTGATGACAGTTTTCTACAAAGTGAACCC ATCTGATGTGAGGAAGCAAATCGGAGGATTTGGGAAGGTTTTCAAGAAAACTTGCCAAAGGAAAACGGAGACGGAGATAC AGAGTTTGACTAAAGCCCTGACGCATGTCGCCAACATAGAAGGAGAACACTCCTTGAACTGGGTAAACGAAGCGGATATG ATTGAGAAAATTGCCACCGATGTTTCGAACAAACTAAATGCGTCATTGTCAAGGGATTTTGATGGCATGGTGGGACTTGA AGATCATTTGGAAAAAATGAAGTCTTTGTTACATTTAGAAAACAATGAAGCGATGATTGTTGGAATCTCTGGTCCGGCAG GCATTGGTAAGACTACCATTGCGAGAGCTTTATTCAATCAACTCTCTTTTTCTTTTCCGCTTAGATATTTTATGGGAAAT GTTAAGGGGAGTTATAGGAGAACTGATTGTGATGAGCATGGCTTGAAGCTGCGTTTACAAGAACAACTACTTAAGAAAAT TTTGAACCAAAAAAGAATGAAGATAAGTCACTTAAATGTAATATACGAAAGGCTAGGCAACCAAAAGGTTCTCATCATTC TTGATGACGTGGATCATCTTGAGCAGATTATTGTGACAACGGAAGATCGAGAGCTTTTGCAGCAACATGGTATCAACAAT GTATACAATGTGGCTTTTCCATCTAGTGAAGAAGCTCTTGGGATCTTTTGTCTATCTGCTTTCAAACAAATTTCTCCACC TAATGGTTTTGGGAGGCTTGCGGAACGAGCAGCAGAGCTTTGCAGTAATCTTCCCTTGGGTCTCTGCGTTGTGGGTTCAT CTTTGCTTGATAAATCTCTCATATGTATATCTACCAATGGGGATATACAGATGCACAAGTTACTACAACAAGTGGGTACA CAAGAAATTAAAAGACAAGAGCCTTGGAAACGACACATCTTAATTGACCCTTATGAGATTTGTGATGTCCTTCAATCTAG CACAGGTACTGGTACTGTGATGGGTATATCTTTTGATATAACTGAAATCAGCAAAGTGTCTATAAGCAAGAAAACCTTTA GAAGAATGTGTAATCTCCGATTCCTCAGAGTTTACAAAAGCAGAATTGATAGAGATGTTGAAGTGCACATACCAGAGGAG ATGGAGTTTCCACATGGACTGAGGTTTCTACATTGGAAGCCATACCCAAGCAAGTGTCTCCCTTCTACGTTTCACCCTGA ATATCTTGTGGAACTCGATATGCAGCATAGCCAGCTCGAAAAGCTTTGGGAAGGAACCCAGCCGCTTGCAAATCTCAAGA AGATGAATTTGTCAGGGTCATGGGATTTGAAAGAGGTTCCAGATCTTTCAAATGCCACGAACCTCGAGTTATTGGATCTG AGCGGCTGCATGAGTTTGGTAGAGATTCCATCCTCTATTTCAAATCTTCATAAACTACAGGAACTGATGATGATGTTCTG CATAAACCTAGAAGTAATTCCAGAGGGGTTGAACTTGATGTCTATTGAAACAGTCAATATGGTGGGGTGCTTACGATTAA GAACCTTTACCCAAAGTTTCATGCCTTTCAACCTAAGACATATTTTTCTTACCAGCTGCGAGAAACTCCAATCATTGCCA GACACTGTTTCTACTGAACTCATAACCCTAATTGCGAACAATTGCCAGTCACTCTAA |
| AA seq | Len:659 aa MALSSSRSWRYNVFLSFHGPDVRSSYLSHLRKQFERNGIITFNDQEIERSQTIKPELTRAIQESRISIVVLSQNYASSSW CLNELEEILDCKETGQIVMTVFYKVNPSDVRKQIGGFGKVFKKTCQRKTETEIQSLTKALTHVANIEGEHSLNWVNEADM IEKIATDVSNKLNASLSRDFDGMVGLEDHLEKMKSLLHLENNEAMIVGISGPAGIGKTTIARALFNQLSFSFPLRYFMGN VKGSYRRTDCDEHGLKLRLQEQLLKKILNQKRMKISHLNVIYERLGNQKVLIILDDVDHLEQIIVTTEDRELLQQHGINN VYNVAFPSSEEALGIFCLSAFKQISPPNGFGRLAERAAELCSNLPLGLCVVGSSLLDKSLICISTNGDIQMHKLLQQVGT QEIKRQEPWKRHILIDPYEICDVLQSSTGTGTVMGISFDITEISKVSISKKTFRRMCNLRFLRVYKSRIDRDVEVHIPEE MEFPHGLRFLHWKPYPSKCLPSTFHPEYLVELDMQHSQLEKLWEGTQPLANLKKMNLSGSWDLKEVPDLSNATNLELLDL SGCMSLVEIPSSISNLHKLQELMMMFCINLEVIPEGLNLMSIETVNMVGCLRLRTFTQSFMPFNLRHIFLTSCEKLQSLP DTVSTELITLIANNCQSL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |