Names & Information

Knowledge of BnaC09G0170300ZY:

Gene Name
BnaC09G0170300ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g14870D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1
NT seq
Len:3018 nt

ATGGCGTCTTCTTCTCGGAGCTGGAGATACAACGTCTTCCCGAGCTTCCACGGACCAGATGTTCGTGTAACATTTATGAG
TCATTTAAAAAAGCAGTTTCAACACAACGGGATCATAGCGTTCAACGATGAAGGGATTGAGAGAAGCAAACTGATCGGTA
CTGAACTCATACGGTCGATAAGAGAGTCAAGAATCTCAATCGTGGTGCTCTCGGAGAACTATGGTTCTTCAAGTTGGTGT
TTGAATGAGCTATTGGAGATTTTGAAGTGTCAAGAATCTGCGGGACAAATAGTGATGACGGTTTTCTACAAAGTGGATCC
ATGTGATGTGAGGAAACAGATGGGAGAGTTTGGTAAGACTTTCAAGGAAACTTGCGAAGGGAAAACAGAGACCCAGGTGC
ATAAATGGATTCACGCTTTGACCCATGTCGCCAATATAGCCGGAGAACATTCTGTGAACTGGAACAATGAAGCAAAAATG
ATTGAGAAGATTGCCTTAAATGTTTCAGACAATCTAAATGCTACACCATCTAGGGATTTTGATGGGATGGTAGGACTTGA
GGGTCATTTGGGGAAGATTCAATGTTTGTTAATTTTAGAAAATGATGAACCTATGACCTTAGGAATCTCTGGTCCTGCGG
GTATTGGTAAAACTACCATTGCAAGAGCTTTATACAACCAACTCTCTCCTGATTTTCCGCTTAGATATTTCATGGAAAAT
GTTGGAGGAAGTTATAGGAATATTGGTTGTGGTGACCATGGTTCAAAGCTGCGTTTACAAGAAGAGCTTCTTTTGCACAT
TTTGAACCAAACCAATATAAATGTATGTCACTTAGATGTGATAAGTGAAAGGTTATGCAACCAAAAGGTTCTTATCGTTC
TTGATGATGTAGATAGTCTTGATCAGCTAGATGCTCTGGCTAAAGATATATATCATTTTGGTTCCGGAAGTAGGATTATT
GTGACTACGAAAGATCAAGAGCTTTTGGAAAGATATGGCATTACCAATACATACCATGTGGGTTTTCCATCTAATGGAGA
AGCTCTTGAGATCTTCTGTAGATATGCTTTTAGAAGAAACTCTCCAAAATATGGTTTTGAAAAGCTGGCAATAAGAGTAG
CGGAGCTTTGCGGTAATCTTCCGTTAGGTCTACGTGTTGTGGGCTCATCTTTAGGTGGGAAAAGTGGGGATGAATGGGAA
GTTATTATCCATAGGCTAGAAACTAGTCTTGATGAAGATCTTGAGAGAGTATTAAGAGTCGGATATGAGACTTTACATGA
GAAAGATCAAGCTCTGTTTCTTCACATTGCTATATTTTTCAACAACAAAGACCAAGATTACGTAAAATCCATGCTCCATG
ACTGTAATTTGAATGTTGAACATGGGTTGAGAAACCTAGTCAATAGATCTCTCATAGACATATCTACCAATGGAGAAATA
GTGATGCACAGCTTACTACAACAAATGGCTAGACAAGTCATTCAAAGACAAGAACCTTGGAAACGCCACATTTTAATTGA
TCCTCGTGAGATTTGTGATGTTCTTGAATATGAGACAGGGACTAGAACAGTGTGTGGCATATATTTCGATACATCAGAAA
CAGGCGAAGTGTTTGTAAGCAAGGGAGCTTTAAAAAGAATGCGTAACCTTCAGTTCCTGACTGTCCACAAAAGAAAACAC
TGTGAAAAAGACATAGTGTGCATACCTCAGGACTTGGAGTTTCCACCTCGTCTTAAGTTACTACATTGGGAGGTGTACCC
AAGAAAGAGTCTCCCTATGAGATTTCATCTCGAAAATCTGGTCGAACTCAATATGCGCGATAGCCAGCTCGAGAAGCTCT
GGGAAGGATCTCAGCCCCTCACAAATCTCAAGAAGATGGATTTGGCAATGTCCTGTCATTTAAAAGAACTCCCAGATCTT
TCAAATGCAACAAATCTCGAGAGACTAAATCTGAATGACTGCGAGAGTCTGGTAGAGATTCCATCCTCTTTTTCAAATCT
TCACAAGCTAAAAGCGTTGAGCATGTTTGCCTGCACAAAGCTAGAAGTCATTCCAGCTTACATGAACTTGGCATCTCTTG
AATCGGTTGATATGACTGCATGCCAAAGATTGAGAAACTTTCCAGACATCTCTAGGAACGTCTCAAAGTTCTCTATCTCA
GTCGAGGAACTAGACCAAGTGCCTGAGTCTATCAGGCTTTGGTCTCGTCTTCGTGTTCTCACCATAACCAGCAAAGGAAA
ACTAAAGTCCTTAACACATCTTCCCCAAAGTGTAAAGCATCTACACCTAAGCTGCATTGGTGAGCAGAGGATTCCATATT
TCAAGAAAAGTCTCCAGCGGGTAGAACTTTATCTAAACAGCTGCAGAAGTTCACTACTCAGGGAAGATTGTGAACCCAAG
GAGGGACTTACTTGTCCTTATGACACTCCATACACGCAACTCGATTACACGAACTGCTTCAAACTGGACCGAGAAGCACG
GACAGCAATTTTAACAGAACATTTTGCTCAAGGCTGGGCTTGTTTACCTGGAGGAGAAGTGCCTGTAGAGTTCGATCACC
AAGCCAAAGGAAATAGTGTGACCATACATCCCGTGAGTAACATGTCTCTCACCATTTTCAAGGTTTGTGTGTTGATTTCT
CCTAACCAGCAAACCAGAGAATCGGAACAACTAGCGTGTTGTCGTATAAGCAAAGGGATTGAGGAGATCAGTGTTTATGC
TATTCCTAGGATTCAAAGAAAACATTTATTTCTATTTCCCTCATACTTATTGCAAGAATCTACTAGCAGAGAGGTTGTGT
TTACATTCAGCAGCGAACTCGAGATTGTTGAATGCGGTGTCCAAATCTGGAAGGATGAATCAGAAAGAAACCAAAGTGCA
TATAGTAAACCAGGAAATGGTGAGGAAGAAGATGTCAGCAATAACCAGCAGGACACATATAACATCAGCAGAGCTTGGGA
CGAAGAAGAAGCTGAGGAGTATGTGAATCTGAATCCAGCAAAGCGTACAAAGAGATGA
AA seq
Len:1006 aa

MASSSRSWRYNVFPSFHGPDVRVTFMSHLKKQFQHNGIIAFNDEGIERSKLIGTELIRSIRESRISIVVLSENYGSSSWC
LNELLEILKCQESAGQIVMTVFYKVDPCDVRKQMGEFGKTFKETCEGKTETQVHKWIHALTHVANIAGEHSVNWNNEAKM
IEKIALNVSDNLNATPSRDFDGMVGLEGHLGKIQCLLILENDEPMTLGISGPAGIGKTTIARALYNQLSPDFPLRYFMEN
VGGSYRNIGCGDHGSKLRLQEELLLHILNQTNINVCHLDVISERLCNQKVLIVLDDVDSLDQLDALAKDIYHFGSGSRII
VTTKDQELLERYGITNTYHVGFPSNGEALEIFCRYAFRRNSPKYGFEKLAIRVAELCGNLPLGLRVVGSSLGGKSGDEWE
VIIHRLETSLDEDLERVLRVGYETLHEKDQALFLHIAIFFNNKDQDYVKSMLHDCNLNVEHGLRNLVNRSLIDISTNGEI
VMHSLLQQMARQVIQRQEPWKRHILIDPREICDVLEYETGTRTVCGIYFDTSETGEVFVSKGALKRMRNLQFLTVHKRKH
CEKDIVCIPQDLEFPPRLKLLHWEVYPRKSLPMRFHLENLVELNMRDSQLEKLWEGSQPLTNLKKMDLAMSCHLKELPDL
SNATNLERLNLNDCESLVEIPSSFSNLHKLKALSMFACTKLEVIPAYMNLASLESVDMTACQRLRNFPDISRNVSKFSIS
VEELDQVPESIRLWSRLRVLTITSKGKLKSLTHLPQSVKHLHLSCIGEQRIPYFKKSLQRVELYLNSCRSSLLREDCEPK
EGLTCPYDTPYTQLDYTNCFKLDREARTAILTEHFAQGWACLPGGEVPVEFDHQAKGNSVTIHPVSNMSLTIFKVCVLIS
PNQQTRESEQLACCRISKGIEEISVYAIPRIQRKHLFLFPSYLLQESTSREVVFTFSSELEIVECGVQIWKDESERNQSA
YSKPGNGEEEDVSNNQQDTYNISRAWDEEEAEEYVNLNPAKRTKR*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0000166
Pfam
Leucine Rich Repeat
KEGG
disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A)