Names & Information
Knowledge of BnaC09G0172700ZY:
| Gene Name | BnaC09G0172700ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g15110D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g59620 OS=Arabidopsis thaliana GN=At1g59620 PE=2 SV=3 |
| NT seq | Len:2250 nt ATGGACCCTCCTCCTCTAGTGATTATTGACTCACTACTTTGGTGGTTACGCAGGAGAGTTATGGCTGAGACACTTTTGTC GTTTGGAGTCGAGAAGCTCTGGGACCTCATTGTCCGAGAATCTGATCGGTTTCATGGAGTTAAAGAGCAATTTGATGAAT TAAAAAGTGATCTGAATATGCTAAGGTGTTTTTTGGAAGATGCAGATGCCAAAAAACATGCAAGTGCAATGGTGAGAAAC ACTATGAAAGAGATCAAAGAAATTGTGCATGACGCAGAAGATATCGTCGAAACCTTTCTTCTAGAGGAAGAACTAGGAAA TTCATGTGGCATCAGGAACAGTGCAAGGAAATTTTCATGTGGTGTATTTGAACGTAGGGGACTTGCTTTCAGTATAGAAG CCATAAGTAAGAGGACCTCTAAGGTGATCCGTGATATGCAGAGTCTTGGAGTTCAACAGGTCATTGTCCATGAAGGGTAT ATGCATTCTCTACGAGAAAAACAAAGGGAAATGCGACAAACATTTTCTAGCGACGATGAAAGCGTCCTTGTCGGGTTGGA GGAAAACGTGAAGAATGTTGTCAGCTATTTGATGGAGGAGGATAGTGTTCAGGTGGTTTCTATAACCGGGATGGGTGGTA TTGGTAAAACCACCCTCGCAAGAGAAGTTTTTAATCATGAGATGATAAAATGCCATTTTGTAGGACTTGCGTGGGTATGT GTTTCCCAACAGTTTACAAGGAAGTATGTGTGGCAGACAATCTTGCGAAAGCTTAGGCCAGTATGTAAAGTCTCAGAGAT GACAAACGACGAACTTCAAGAAAAACTCTTTCAAGTCCTTGAAACGCAAAAGGTTTTAATTGTCCTTGATGACATATGGA GAGAAGAAGATTGGGACATAATAAAAGCAATGTTTCCACGCAAAAAAGGTTGGAAGGTTCTACTTACTTCTCGCAACGAG GGTGTCGCAGTGCGAGCAGATCCAAGTTGTTTTACCTTTAAACCAGATTGTCTAAATCTTGAAGAAAGCTGGATACTTTT CCGGAGGATAGCATTTCCTATAGAAAACACTAATGAGTATAAGGTTGATGAAGAAATGGAAAGGATGGGAAAGCAGATGA TAAAACATTGTGGAGGACTACCCTTGGCAGTAAAAGTGTTAGGAGGGCTGTTAGCTTCACAATACACATTGCGTGAGTGG AAAAGGATACATGAGAACATTAGATCTTACATTGTCGGAGGGACTAGTTTCGAAGAGAAGAACGTTAATTCGGTTTACCA TGTTTTGTATTTGAGCTTTGAAGAACTTCCTATTTATTTGAAGCACTGCTTCCTCTACTTAGCCCATTTTCCAGAAGACT ATGCAATAGATGTAGGGAAACTATCTTATTATTGGGCTGCAGAGGGAATACCAAGGCCGAGGTATTACGATGGAGTAACC ATCCAAGAGGTTGCAGATGGATTCATAGCCGAATTGGTGAAGAGAAACATGGTTATTTCTGAAAGAGACTTTCGTACTTC AAGATTTGAAACCTGTCAGTTACATGACATGATGAGAGAAGTTTGTTTGCATAAAGCTAAAGAAGAAAATTTCGTGCACA TTGTTGATCTGGGTACCTCAACTGCATCATCTCAATCGCTTAGTTCCCGCAGGCTCGTCATACAGTCTTCTCACTTTGAA TTTCATGTGGAGGAGTATATAATAAATCCAAAACTTAGATCTTTCTTGTTGACCCATAGTGCGGTCTTGCACTATTGGAT GGCATCAAGTTTATGTTTTACTAGACTACAGTTTATGAGAGTCTTAGATCTCTCTGGAGCCAAGTTTGAAGGAGGGAAGT TACCCCCTGGCATTGGGAAGCTCATTCACTTGAGATATTTAAGTTTACACCGTGCATGGATATGTCATCTACCTTCTTCT ATCCAAAATCTAAAGTTTCTGCTCTATTTGAGTCTTGATGTAGATTGTAGATATCAAGTTTACATGTCAGATTTCTTGAA GGAGTTACGAAAATTGAGGTACCTCAGTTTACCGAGGGAATTACAAGATGGGACAAAGTTGAAATTAGGTAATCTTATCA ACTTAGAGAGACTTGGGAATTTCTCAACAAAGCATTGCAGTGTCAGAGATCTTCACAGTATGACAAGGCTAAGGGGTCTC TCAATCATATTCAATGGTGAGTGTACTCTTGAAGCTCTATCTTCATCTCTAGGTCAACTGAAACACCTGGAAAATTTTAA TCTGAGATAA |
| AA seq | Len:750 aa MDPPPLVIIDSLLWWLRRRVMAETLLSFGVEKLWDLIVRESDRFHGVKEQFDELKSDLNMLRCFLEDADAKKHASAMVRN TMKEIKEIVHDAEDIVETFLLEEELGNSCGIRNSARKFSCGVFERRGLAFSIEAISKRTSKVIRDMQSLGVQQVIVHEGY MHSLREKQREMRQTFSSDDESVLVGLEENVKNVVSYLMEEDSVQVVSITGMGGIGKTTLAREVFNHEMIKCHFVGLAWVC VSQQFTRKYVWQTILRKLRPVCKVSEMTNDELQEKLFQVLETQKVLIVLDDIWREEDWDIIKAMFPRKKGWKVLLTSRNE GVAVRADPSCFTFKPDCLNLEESWILFRRIAFPIENTNEYKVDEEMERMGKQMIKHCGGLPLAVKVLGGLLASQYTLREW KRIHENIRSYIVGGTSFEEKNVNSVYHVLYLSFEELPIYLKHCFLYLAHFPEDYAIDVGKLSYYWAAEGIPRPRYYDGVT IQEVADGFIAELVKRNMVISERDFRTSRFETCQLHDMMREVCLHKAKEENFVHIVDLGTSTASSQSLSSRRLVIQSSHFE FHVEEYIINPKLRSFLLTHSAVLHYWMASSLCFTRLQFMRVLDLSGAKFEGGKLPPGIGKLIHLRYLSLHRAWICHLPSS IQNLKFLLYLSLDVDCRYQVYMSDFLKELRKLRYLSLPRELQDGTKLKLGNLINLERLGNFSTKHCSVRDLHSMTRLRGL SIIFNGECTLEALSSSLGQLKHLENFNLR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | putative disease resistance protein At1g50180; K13457 disease resistance protein RPM1 (A) |