Gene Name | BnaC09G0175700ZY |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaC09g51750D [Brassica napus] |
Best Hit (SwissProt) | Probable disease resistance protein RXW24L OS=Arabidopsis thaliana GN=RXW24L PE=2 SV=1 |
NT seq | Len:2301 nt
ATGTCTGGGGAACTTGTGTCATTTGCAATAGAAAAGCTATGGGACCTACTGAGCCATGAATACGAACAATTTCAGGGACA
TACAAGTGAAGTGGTGAGAAGCTTTGTGAAAAGGATCAATGAGATTGTTCTTGACGCTGAAGATACAATTGAACGCACTA
TTCTGAAAGATGTACTCGGACGTGGTAGCATCGGAAGACTTGCGTGCATTGCTCCGAAACGCATGAAGATTGCATCAGAA
ATTGGAAGCTTAACTAAGACGATCAAGAAAGCAGTTCGTGATATGAACGATTTTGAGGTACACCAGAGAATTGACGATGT
AAAGGATCCACAACCTTCTCAACAAAGACAAGAATTTCCTAAAATTCACGAAGGAAATCTTGTGGGGATGGAAGCAAATG
TTAAGACATTACTAGGATATTTGGTGGAGGGAGATGATATTCAAGTTGTTTCCATAACCGGGATGGGTGGTCTTGGGAAA
ACCACCCTTGCTAGACAAGTTTTTCATGACAACCTTGTTAAAAAGAAGTTTGATAGACTCGCATGGGTCTGTGTTTCCCA
AGTTTGTGATCATATCAAAGTGTGGCAAGCAATCTTGCAGAATTTCAGATCCAAAGAACAGCAAAATGAAATCCAGAAGA
TGACAAAAGCTGCCCTCCAAGGCGAACTCTTTGAACTGTTAGAAACATCAAACTCGTTAATCGTATTAGATGACATATGG
AATAAAGAAGATTGGGACTTGATCAAGCGAATATTTCCACACAAAGCAGGTTCGAAGGTGCTACTTACTTCTCGAAATGA
ACGAGTCGCAAGACCTGGAGAAACATATATAGACTTTAAACCAGAATGCCTATCTGATCAAGACAGTTGGACACTTTTCA
AAAGTATAGCGATGCCCAGAAAAGATGCATCTGAAATGACTCCAGGTGATGAGGAGGTGGAAAAGATGGAAAAGATGGGA
AAGAAAATGATGGAACATTGTCGAGGATTGCCTTTGGCTATCAGAGTGTTAGGAGGATTGCTGGCTGAGAAATACACAAT
TCACAACTGGGAACGGTTATCTTTGAATGTTGGATCTCATCTCGTTGGTAGAACCAGTGACGACAACAATAATTCGCTTA
ACCATATATTGTCTCTAAGCTTTGAAGAGTTGCCTGTTTATCTGAAGCTTTTCTTCCTCTACCTGGCCCATTTTCCAGAA
GATTATGAGATAAATGTTGAAGATCTGTCTTATTACTGGGCTGCAGAACGAATACTTGAGTATGGAACTAGAGACCGCAT
TCGAGATGTTGGAGATAATTACTTTTGGGAGTTGGTGAGAAGAAATATGGTTATATCCGAAATAGACAAAACCACTGGGA
GATTTGAGACATGCCGTTTGCATGACTTGATGAGAGATATTTGTTTGTTTAAAGCCAAAGAAGAGAATTTCCTACATACT
GTTGGTGTCCGCTCTCCGACTTCACACTATCAGTCACGGAGGTTTGTCTCACATGATCCGACTACATTGAATGTTGAGAA
AGATATTAGTAATCCAAAGGTTCGATCTATAGTGGTTTTCTGGAACCTTTCGGATTTAGGCTTAACAAGGTTGGAACTTT
TGAGAGTACTACATCTTCCTGGAGCCAAATTTGAGAAAAGGAAGTTATCTGATAGCATTGGAGAGCTCATACACTTAAGA
TATCTGAACTTAGAAGGTGCGTGGGTATCTCATCTTCCCTCTTCTTCTACAAAATCTAAAGCTGCTGATCTATCTAAATT
TAAATTATACGAAGGGGCTAAGGGGACCAAAGAAGGACGAGTGCCTATGGGGACCAACAAATGGAACACTCTATTGGAAT
TTGATAATCTCAACAAGCTGAAGTTGAGTACAAATATTCAATTGCTCTCTCATGAATTACAGTTCCCTTCTCGCCTAACA
AGCCTGTATCTGTTCGGGAGTGGTTTGAAGGAGGACCCAATGCTGATTCTAGAGAAGCTGGTGCATCTGAAAGAGGTTAA
ATTAGGGAGTGGATCTTTCAGTGGGAGGAGAATGGTTTGCTCGAGGGGTGGGTTTCCTCAGTTGCAGAAGCTATATTTAG
GGGAGCTAGAGGAGCTGAAAGAGTTGATAGTAGAAGAAGGCTCCATGCCCCTTCTTTATACTCTCTCTATAAATAATTGC
CAAAAACTAAAGGAGTTTCCTGATGGGCTGCCATTCATCACTTCCTTAAAGTATTTGAGAGTTGAGAGAGGAATGGAAGA
AAAGATTGTCCGAAGGAGGAGGAGAAGATTATTACAAAGTCCAACACATCCCTTCTGTTGA |
AA seq | Len:767 aa
MSGELVSFAIEKLWDLLSHEYEQFQGHTSEVVRSFVKRINEIVLDAEDTIERTILKDVLGRGSIGRLACIAPKRMKIASE
IGSLTKTIKKAVRDMNDFEVHQRIDDVKDPQPSQQRQEFPKIHEGNLVGMEANVKTLLGYLVEGDDIQVVSITGMGGLGK
TTLARQVFHDNLVKKKFDRLAWVCVSQVCDHIKVWQAILQNFRSKEQQNEIQKMTKAALQGELFELLETSNSLIVLDDIW
NKEDWDLIKRIFPHKAGSKVLLTSRNERVARPGETYIDFKPECLSDQDSWTLFKSIAMPRKDASEMTPGDEEVEKMEKMG
KKMMEHCRGLPLAIRVLGGLLAEKYTIHNWERLSLNVGSHLVGRTSDDNNNSLNHILSLSFEELPVYLKLFFLYLAHFPE
DYEINVEDLSYYWAAERILEYGTRDRIRDVGDNYFWELVRRNMVISEIDKTTGRFETCRLHDLMRDICLFKAKEENFLHT
VGVRSPTSHYQSRRFVSHDPTTLNVEKDISNPKVRSIVVFWNLSDLGLTRLELLRVLHLPGAKFEKRKLSDSIGELIHLR
YLNLEGAWVSHLPSSSTKSKAADLSKFKLYEGAKGTKEGRVPMGTNKWNTLLEFDNLNKLKLSTNIQLLSHELQFPSRLT
SLYLFGSGLKEDPMLILEKLVHLKEVKLGSGSFSGRRMVCSRGGFPQLQKLYLGELEELKELIVEEGSMPLLYTLSINNC
QKLKEFPDGLPFITSLKYLRVERGMEEKIVRRRRRRLLQSPTHPFC* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0006952 |
Pfam | NB-ARC domain |
KEGG | POPTRDRAFT_554585; disease resistance family protein; K13457 disease resistance protein RPM1 (A) |
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