Names & Information
Knowledge of BnaC09G0182000GG:
| Gene Name | BnaC09G0182000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g17030D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:2607 nt ATGACCGTTTTCTATGAAGTGGATCCAACTGATGTAAAGAAGCAGAGAGGAGAGTTCGGAAGGGCTTTCAAGAAAACGTG TGTTGGAAGGAAACAGGAGGAAATCGCCAGATGGAGACAAGCTTTGGCGGAAGTAGCCACAATTGCCGGAGTGCATTCAA CCAAATGGGATGATGAAGCGGCCATGATTGAAAAAATTGCCGTTGATATTTTTAACAAGTTGAATTATTCCAAGTCATCC AATGATTTTAACAACATAGTTGGGTTGGAAGCTCATTTGGAAAACATGGAATCATTGTTATGCTTACACTCAGATGAGGT GAGGATGATTGGGATTTGGGGTCCGTCTGGGATTGGTAAGACCACAATCGCCAGACATCTTTTCAACCAGGCCTCTAGCC ATTTCCAACATAGTATCTTTGTGGAGAACATCAAAGCATCAATGCATACGAGAAGAACCAGCTCTGATGACTACACTGCG AAGTTGAACTTGCAGCAACAAATAATGTCTCAAATATCCCCGAAGGATGTCAAGATTGGCCATTTAGAAGCTGTGAAAGG TCGATTGTTTGATAAGAAAGTTCTTGTCGTACTTGATGACGTGGATGAGTCAATGCTACTAGAAGCTATGGCGAATGAAA CTTCATGGTTTGGTCGTGGAAGCAGGATTATCATCACCACTCAAGATCAAAATGTCCTGAGGGCACATGATGTCCAAGAT GTTTATAGAGTGGATTCCCCACCAACTCATACTGCTCTTAAAATCTTTTGCCGGTATGCTTTCCGTCAAGATTCCCCATA TGCGGGTTTCGAGAAGCTTGCTGGGAAAGTTACAAATCTTGTCGGTGAACTCCCTCTGGGACTAAAGGTTATGGGCTCCT ATTTTCGGGGAATGTCCAGGCAGAAGTGGGAAAAATCACTACTAAGGTTAACAAAGCACCTTGATGGAAGCATTGCGAGG ATTTTGAAGTTTAGTTACGATGCCTTAGACATGGAAGATAAAGTGTTATTTCTTTATATAGCTTGCTTTTTCAACTATGA AAGCATTGCAAAACTGGAGAAGTATCTTGCAAATGAGTTCTCGGATTTGAGATCAGGGTTTGACATCTTAGCTGAGAAAT CTCTCATATCTATGAATAACTCAGGTTATTTAGAGATGCAAAAGTTGCTAGAGCAATTGGGTAGAGATATTGTTCATCAA GAGTACATTCGTGAGCCTGGACGACCTCAGTTTTTAGTTGATACAAGAAATATTCGTGAAGTACTTACTAACAATACTGT TAGCACAAATGTTCGAGGCATTAAATTTGACTTGTCTGAACTCTCGAAAGACTTAAATATAAGTGAGAGAGCCTTCGAAG GACTATCCAATCTTCAGTTCCTAAGATTCCACTATAGAATTGGTAACCGGAGAAACCAACTGCACTTACCACGAGGTCTG AACAACATACCCACAGGACTTAGGATACTACATTGGGATCAATTTCCGGGGACAAGTTTACCTTCAGATATGAATCCGCA GTCCCTCGTTGAACTAGTAATGCATGGCAGCAAGCTTGAGAAGTTATGGGAAGAGACTAAAGAAATGGATTTGAATCAAT GCACAAGTTTGGTGGAGCTTCCCTCCTCTATTGGTAAAGCCAGTAATCTCAAGAAACTGGATCTCGTACACTGCTCAAGT CTGGTACAGCTTCCCCCGTCGATTGGAGATAACACTAATCTGCAAAACCTGGATCTCAGTAATTGCTCAAGTCTGGTGGA GCTTCCTTCATCAATGGATAATCTCATTAACCTTGAGAAACTTAATGTCAGCCACTGTTCAATTATCGAACAGTCCATCG GAAGTGCCAGTAATCTAGAAAAACTGGATCTCAGTAATTGCTCAAATCTTGTGGAGCTTCCTTCCTCCATCGGAAATGCC ATAAATCTGCTGTACTTGAGTCTTATAGGATGCTCGAGGTTGGTTAAGCTCCCCAGCTCTATGGGGAATCTCACTAGTCT CAAGATATTGTATCTCAATAACTGCTCAAACCTGGTGGAGCTACACTACACTATCGGCAATGCCATTAGTCTTGAGAAAC TAGATCTGAGTAATTGCTCAAGCCTGGTGAAGCTCCCGCACTCCATCGGGAAGGCCACTAATCTTCAGAAACTGAAGCTC GTTAATTGCTCAAGCTTGGTGGAACTCCCATCCTCCATAGGAAACCTCTTTAAATTGCAGTTGCTGTGTTTGAAGGGGTG CTCTAAGCTGGAGGTTCTTCCGATCAACATTGACATGCAATCTCTGAACGAGCTTGATCTCACTGATTGCTCTTTGCTGA AGTCATTTCCCCAGATTTCGACATACATTGGAGTGCTTAGGCTAAAAGGAACAGCAATAAAAGAAGTTCCTTCATCTACG AGGTTATGGTGCCGTCTTGCTACACTGCAGATGTCATACACTGAAAGCCTCAACTCATGGAGGCCCCTCGTGTTCATGAA CACGATGTATCCTCAGACAGCGACATCGGAGGCAACCACTAAACTGAAGATTATGGCAAGCAGCTGGAGACCAAAACAAG TAAACATTCTTCTGTCTGGTGCTTGTAAAGATGATGATGACAGGTAA |
| AA seq | Len:869 aa MTVFYEVDPTDVKKQRGEFGRAFKKTCVGRKQEEIARWRQALAEVATIAGVHSTKWDDEAAMIEKIAVDIFNKLNYSKSS NDFNNIVGLEAHLENMESLLCLHSDEVRMIGIWGPSGIGKTTIARHLFNQASSHFQHSIFVENIKASMHTRRTSSDDYTA KLNLQQQIMSQISPKDVKIGHLEAVKGRLFDKKVLVVLDDVDESMLLEAMANETSWFGRGSRIIITTQDQNVLRAHDVQD VYRVDSPPTHTALKIFCRYAFRQDSPYAGFEKLAGKVTNLVGELPLGLKVMGSYFRGMSRQKWEKSLLRLTKHLDGSIAR ILKFSYDALDMEDKVLFLYIACFFNYESIAKLEKYLANEFSDLRSGFDILAEKSLISMNNSGYLEMQKLLEQLGRDIVHQ EYIREPGRPQFLVDTRNIREVLTNNTVSTNVRGIKFDLSELSKDLNISERAFEGLSNLQFLRFHYRIGNRRNQLHLPRGL NNIPTGLRILHWDQFPGTSLPSDMNPQSLVELVMHGSKLEKLWEETKEMDLNQCTSLVELPSSIGKASNLKKLDLVHCSS LVQLPPSIGDNTNLQNLDLSNCSSLVELPSSMDNLINLEKLNVSHCSIIEQSIGSASNLEKLDLSNCSNLVELPSSIGNA INLLYLSLIGCSRLVKLPSSMGNLTSLKILYLNNCSNLVELHYTIGNAISLEKLDLSNCSSLVKLPHSIGKATNLQKLKL VNCSSLVELPSSIGNLFKLQLLCLKGCSKLEVLPINIDMQSLNELDLTDCSLLKSFPQISTYIGVLRLKGTAIKEVPSST RLWCRLATLQMSYTESLNSWRPLVFMNTMYPQTATSEATTKLKIMASSWRPKQVNILLSGACKDDDDR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |