Names & Information
Knowledge of BnaC09G0183700ZS:
| Gene Name | BnaC09G0183700ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g51450D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2937 nt ATGACACATCCTTCTTCATATTACTCAACCTCTTGGAGATACGACGTCTTCCCTAGCTTCAGAGGAGAAGACGTCCGTAA AAACTTTCTCAGTCACTTGCACAAAGAATTTGAAAACAAGGGAATATTGACTTTCAGAGATGACCAGATCGAAAGAAGCC ATAGCATCGGTCCTGAGCTGCTGGTTGAGATCTTGAAGTGCAAGGAAGAACAAGGACTCAAAGTGATGCCGATCTTTTAT AAAGTGGATCCATCTGAAGTAAGAAAACAAACCGGAAAGTTCGGAATGGGTTTCTTGAAAACCTGTCACGGAAAGACGGA GGAGCAAAAACATAGTTGGAGCCAGGCGTTGACCGATGTTGCCAGTATTGTTGGCGGCCATCCTCAAGATTGGGACAATG AAGCAGACATGATCACAACAATTGCCAAGGATGTATTAGATAAATTAAATGCGACACCATCAAGAGATTTCGATGATTTA GTTGGAATTGAATCTCACATTGCTAGAATGAAGACTTTGCTATGCCTTGATTCTCAAGAAGTGAGGTTAGTAGGGATATG GGGTCCTGCAGGCATTGGTAAAACCACTATAGCTAGAGCTTTATATAGCCAATTTCATGAAAACTTCAAACTTTCTATCT TTATGGAGAACGTGAGTGAAAGTTATGGTGGAACTAACCTTGATAGCTATGGTCTAAAGCTGGGCTTACAACAAAGGTTT CTGTCAAAACTTCTTGATCAACACGGCTTGAGAATAAGCCATTTAGGCGCAATAAAAGAAAGGCTAAAGAACCACAAAGT TCTAGCCATTCTTGATGATGTGGACAACATTGAGCAACTCCAAGCTTTAGCAAAGGAAACTCAATGGTTTGGTAAGAAGA GCAGAATCATAGTGACTACGCGAAACAAACAACTTTTGATTTCACACAATATCAGCCATGTTTACAAGGTGCCTTTTCCA TCAAGAGAAGAAGCTCTTGCTATATTCTGCCAACACGCCTTCAGAGAATGCTCTCCCTCGGATGATTTTAAGGATATTTC AAGTGAATTTGCAGCTCTTGCTGGTCATCTTCCGCTAGGTCTACGCGTTCTTGGTTCATTTATGAGAGGAAAAAGTAAGG ATGAGTGGGAAGTTTCTCTGCCTACTCTAAAAACTAGACTCAATGGAGAGATCGAGAAACTATTAAAAGTCGGGTACGAA GGCTTACACAAAGATGACAAAGCTCTATTTCTTCACATTGCATGTCTTTTTAACGGTCATTATGAAACCTATGTGAAGCA GATGGTGGTAGCCAATAGTGACTTGGATGTTAGCTTTGGACTTAAAGTCTTGGCGGATCGGTCTCTCATACAAATATATG TGGATGGTAGAGTGGTGATGCACTCCTTGCTACGTCAGTTGGGCACAGAAGTTGTTCGCGAGCAATCTGTGAACGAGCCA GGAAAACGTCAATTCTTGATGAGTGCTAGAGAAATTTGTGGCGTTCTTTCGAATAATACTGGTACGAATTCTGTATTAGG TTTGTCGGTAGATATGTGTGACCTCAACGAAGAATTTTATATAAGTGAGAATGCATTTGAAAATATGAGGAATCTTTTAT ATATAAGAATCTACAGGAGTAATGATCCAAATACAAATAAAATGAAGTTACCAGAAGAAGGTCTAAGTTATCTGCCACAA CTAAGGCTATTGCAATGGGAGGCGTATCCGCACATGTTCTTGCCTTCTCGTTTCCGAACGGAATGGCTCGTGGAACTCAA CATGTCTCATAGCAAGCTTAAGACGTTATGGGGAGACAATGCTCAGCCGCTTAGAAACCTCAAGATTATGAATTTGAGCA ACTCTCCGAATCTTGAAAGCTTTCCAAATCTTTTGGAAGCAACAAAGCTGGAGAGATTGGATTTGAGTTGGTGTGAGTCT TTGGTGGAGCTTCCTTCTTCTATACAGAACCTTCATAAGCTCAGCTTGTTAGAGATGTCTTGTTGCACAAGTCTAGAGAT CATACCAACCAACATAAACTTAGCTACTCTATCTCGCCTCCACTTTAGAAATTGCCCTCGACTGAAAACATTTCCAGAGA TTTCAACAAATATAAATTATCTGAAAATAAGAGGCACCGCGATCACTGAAGTTCCTCCATCAGTCAAGTCCTGGCGTAGA ATTAAAGAAATTTGCATGGAAAGTGCTGAGGTGAGGATATTAATTAATCTTCCTTATATTTTGGAGACTCTATGTTTGAG GGGTAATACTAAACTGGTGGCTATCACAAACTACCTCATAAGGCTACGTCGCCTGCGCATGATCGACATCTCTTTTTGCG TCAGTCTCGTGTATCTACCGAAGCTTCCGTACTCAGTACGCTATTTAACAGCTTTAAACTGTGAGTCCCTTCGAAGGTTG CATGGCCCTTTTCGTAACCCAAGCATCCGCCTCAAGTTCACTAATTGCTTGAAACTAGATCATAACGCACAAGAAATGAT CCACCAATCTGTTTTTGGTGTTGTTATCTTACCTGGCGGACAAATGCCCGCATACTTCACTCACCGATATAATGGTAACT GTGGTTTTTATCATTTCACGTTCGATGGATCTGTCAGCTTCTATAGCTTTAAGGTATGTCTACTGCTAGCAGCGGGTACA AGATTCGAAAGTTGTCAGACATCTTTCTACACAAGCTTTCGTGGCAATCCGATAAAGAAGTATTACACATATATATTGAA TCAGCCCCAGCTTAAAGTGGATCATATATGCATGTTTGAGTGTGTTTTGCCACCTGACTACGATGGTCCGCCGTATTTGG GAACTCGTCCTAGTACGACCAAATTGTTCAAGTTTGACTTCAATTGTAATTATGGCTGCAAAGTTCTGGAGTGTGGTCTA CTATTCTTGGAGGCTCGTAAATCTTTGATCGCTGCAAAAAGAGCCGATCGAGTCTAG |
| AA seq | Len:979 aa MTHPSSYYSTSWRYDVFPSFRGEDVRKNFLSHLHKEFENKGILTFRDDQIERSHSIGPELLVEILKCKEEQGLKVMPIFY KVDPSEVRKQTGKFGMGFLKTCHGKTEEQKHSWSQALTDVASIVGGHPQDWDNEADMITTIAKDVLDKLNATPSRDFDDL VGIESHIARMKTLLCLDSQEVRLVGIWGPAGIGKTTIARALYSQFHENFKLSIFMENVSESYGGTNLDSYGLKLGLQQRF LSKLLDQHGLRISHLGAIKERLKNHKVLAILDDVDNIEQLQALAKETQWFGKKSRIIVTTRNKQLLISHNISHVYKVPFP SREEALAIFCQHAFRECSPSDDFKDISSEFAALAGHLPLGLRVLGSFMRGKSKDEWEVSLPTLKTRLNGEIEKLLKVGYE GLHKDDKALFLHIACLFNGHYETYVKQMVVANSDLDVSFGLKVLADRSLIQIYVDGRVVMHSLLRQLGTEVVREQSVNEP GKRQFLMSAREICGVLSNNTGTNSVLGLSVDMCDLNEEFYISENAFENMRNLLYIRIYRSNDPNTNKMKLPEEGLSYLPQ LRLLQWEAYPHMFLPSRFRTEWLVELNMSHSKLKTLWGDNAQPLRNLKIMNLSNSPNLESFPNLLEATKLERLDLSWCES LVELPSSIQNLHKLSLLEMSCCTSLEIIPTNINLATLSRLHFRNCPRLKTFPEISTNINYLKIRGTAITEVPPSVKSWRR IKEICMESAEVRILINLPYILETLCLRGNTKLVAITNYLIRLRRLRMIDISFCVSLVYLPKLPYSVRYLTALNCESLRRL HGPFRNPSIRLKFTNCLKLDHNAQEMIHQSVFGVVILPGGQMPAYFTHRYNGNCGFYHFTFDGSVSFYSFKVCLLLAAGT RFESCQTSFYTSFRGNPIKKYYTYILNQPQLKVDHICMFECVLPPDYDGPPYLGTRPSTTKLFKFDFNCNYGCKVLECGL LFLEARKSLIAAKRADRV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |