Names & Information
Knowledge of BnaC09G0189700ZS:
| Gene Name | BnaC09G0189700ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g14870D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:3018 nt ATGGCGTCTTCTTCTCGGAGCTGGAGATACAACGTCTTCCCGAGCTTCCACGGACCAGATGTTCGTGTAACATTTATGAG TCATTTAAAAAAGCAGTTTCAACACAACGGGATCATAGCGTTCAACGATGAAGGGATTGAGAGAAGCAAACTGATCGGTA CTGAACTCATACGGTCGATAAGAGAGTCAAGAATCTCAATCGTGGTGCTCTCGGAGAACTATGGTTCTTCAAGTTGGTGT TTGAATGAGCTATTGGAGATTTTGAAGTGTCAAGAATCTGCGGGACAAATAGTGATGACGGTTTTCTACAAAGTGGATCC ATGTGATGTGAGGAAACAGATGGGAGAGTTTGGTAAGACTTTCAAGGAAACTTGCGAAGGGAAAACAGAGACCCAGGTGC ATAAATGGATTCACGCTTTGACCCATGTCGCCAATATAGCCGGAGAACATTCTGTGAACTGGAACAATGAAGCAAAAATG ATTGAGAAGATTGCCTTAAATGTTTCAGACAATCTAAATGCTACACCATCTAGGGATTTTGATGGGATGGTAGGACTTGA GGGTCATTTGGGGAAGATTCAATGTTTGTTAATTTTAGAAAATGATGAACCTATGACCTTAGGAATCTCTGGTCCTGCGG GTATTGGTAAAACTACCATTGCAAGAGCTTTATACAACCAACTCTCTCCTGATTTTCCGCTTAGATATTTCATGGAAAAT GTTGGAGGAAGTTATAGGAATATTGGTTGTGGTGACCATGGTTCAAAGCTGCGTTTACAAGAAGAGCTTCTTTTGCACAT TTTGAACCAAACCAATATAAATGTATGTCACTTAGATGTGATAAGTGAAAGGTTATGCAACCAAAAGGTTCTTATCGTTC TTGATGATGTAGATAGTCTTGATCAGCTAGATGCTCTGGCTAAAGATATATATCATTTTGGTTCCGGAAGTAGGATTATT GTGACTACGAAAGATCAAGAGCTTTTGGAAAGATATGGCATTACCAATACATACCATGTGGGTTTTCCATCTAATGGAGA AGCTCTTGAGATCTTCTGTAGATATGCTTTTAGAAGAAACTCTCCAAAATATGGTTTTGAAAAGCTGGCAATAAGAGTAG CGGAGCTTTGCGGTAATCTTCCGTTAGGTCTACGTGTTGTGGGCTCATCTTTAGGTGGGAAAAGTGGGGATGAATGGGAA GTTATTATCCATAGGCTAGAAACTAGTCTTGATGAAGATCTTGAGAGAGTATTAAGAGTCGGATATGAGACTTTACATGA GAAAGATCAAGCTCTGTTTCTTCACATTGCTATATTTTTCAACAACAAAGACCAAGATTACGTAAAATCCATGCTCCATG ACTGTAATTTGAATGTTGAACATGGGTTGAGAAACCTAGTCAATAGATCTCTCATAGACATATCTACCAATGGAGAAATA GTGATGCACAGCTTACTACAACAAATGGCTAGACAAGTCATTCAAAGACAAGAACCTTGGAAACGCCACATTTTAATTGA TCCTCGTGAGATTTGTGATGTTCTTGAATATGAGACAGGGACTAGAACAGTGTGTGGCATATATTTCGATACATCAGAAA CAGGCGAAGTGTTTGTAAGCAAGGGAGCTTTAAAAAGAATGCGTAACCTTCAGTTCCTGACTGTCCACAAAAGAAAACAC TGTGAAAAAGACATAGTGTGCATACCTCAGGACTTGGAGTTTCCACCTCGTCTTAAGTTACTACATTGGGAGGTGTACCC AAGAAAGAGTCTCCCTATGAGATTTCATCTCGAAAATCTGGTCGAACTCAATATGCGCGATAGCCAGCTCGAGAAGCTCT GGGAAGGATCTCAGCCCCTCACAAATCTCAAGAAGATGGATTTGGCAATGTCCTGTCATTTAAAAGAACTCCCAGATCTT TCAAATGCAACAAATCTCGAGAGACTAAATCTGAATGACTGCGAGAGTCTGGTAGAGATTCCATCCTCTTTTTCAAATCT TCACAAGCTAAAAGCGTTGAGCATGTTTGCCTGCACAAAGCTAGAAGTCATTCCAGCTTACATGAACTTGGCATCTCTTG AATCGGTTGATATGACTGCATGCCAAAGATTGAGAAACTTTCCAGACATCTCTAGGAACGTCTCAAAGTTCTCTATCTCA GTCGAGGAACTAGACCAAGTGCCTGAGTCTATCAGGCTTTGGTCTCGTCTTCGTGTTCTCACCATAACCAGCAAAGGAAA ACTAAAGTCCTTAACACATCTTCCCCAAAGTGTAAAGCATCTACACCTAAGCTGCATTGGTGAGCAGAGGATTCCATATT TCAAGAAAAGTCTCCAGCGGGTAGAACTTTATCTAAACAGCTGCAGAAGTTCACTACTCAGGGAAGATTGTGAACCCAAG GAGGGACTTACTTGTCCTTATGACACTCCATACACGCAACTCGATTACACGAACTGCTTCAAACTGGACCGAGAAGCACG GACAGCAATTTTAACAGAACATTTTGCTCAAGGCTGGGCTTGTTTACCTGGAGGAGAAGTGCCTGTAGAGTTCGATCACC AAGCCAAAGGAAATAGTGTGACCATACATCCCGTGAGTAACATGTCTCTCACCATTTTCAAGGTTTGTGTGTTGATTTCT CCTAACCAGCAAACCAGAGAATCGGAACAACTAGCGTGTTGTCGTATAAGCAAAGGGATTGAGGAGATCAGTGTTTATGC TATTCCTAGGATTCAAAGAAAACATTTATTTCTATTTCCCTCATACTTATTGCAAGAATCTACTAGCAGAGAGGTTGTGT TTACATTCAGCAGCGAACTCGAGATTGTTGAATGCGGTGTCCAAATCTGGAAGGATGAATCAGAAAGAAACCAAAGTGCA TATAGTAAACCAGGAAATGGTGAGGAAGAAGATGTCAGCAATAACCAGCAGGACACATATAACATCAGCAGAGCTTGGGA CGAAGAAGAAGCTGAGGAGTATGTGAATCTGAATCCAGCAAAGCGTACAAAGAGATGA |
| AA seq | Len:1006 aa MASSSRSWRYNVFPSFHGPDVRVTFMSHLKKQFQHNGIIAFNDEGIERSKLIGTELIRSIRESRISIVVLSENYGSSSWC LNELLEILKCQESAGQIVMTVFYKVDPCDVRKQMGEFGKTFKETCEGKTETQVHKWIHALTHVANIAGEHSVNWNNEAKM IEKIALNVSDNLNATPSRDFDGMVGLEGHLGKIQCLLILENDEPMTLGISGPAGIGKTTIARALYNQLSPDFPLRYFMEN VGGSYRNIGCGDHGSKLRLQEELLLHILNQTNINVCHLDVISERLCNQKVLIVLDDVDSLDQLDALAKDIYHFGSGSRII VTTKDQELLERYGITNTYHVGFPSNGEALEIFCRYAFRRNSPKYGFEKLAIRVAELCGNLPLGLRVVGSSLGGKSGDEWE VIIHRLETSLDEDLERVLRVGYETLHEKDQALFLHIAIFFNNKDQDYVKSMLHDCNLNVEHGLRNLVNRSLIDISTNGEI VMHSLLQQMARQVIQRQEPWKRHILIDPREICDVLEYETGTRTVCGIYFDTSETGEVFVSKGALKRMRNLQFLTVHKRKH CEKDIVCIPQDLEFPPRLKLLHWEVYPRKSLPMRFHLENLVELNMRDSQLEKLWEGSQPLTNLKKMDLAMSCHLKELPDL SNATNLERLNLNDCESLVEIPSSFSNLHKLKALSMFACTKLEVIPAYMNLASLESVDMTACQRLRNFPDISRNVSKFSIS VEELDQVPESIRLWSRLRVLTITSKGKLKSLTHLPQSVKHLHLSCIGEQRIPYFKKSLQRVELYLNSCRSSLLREDCEPK EGLTCPYDTPYTQLDYTNCFKLDREARTAILTEHFAQGWACLPGGEVPVEFDHQAKGNSVTIHPVSNMSLTIFKVCVLIS PNQQTRESEQLACCRISKGIEEISVYAIPRIQRKHLFLFPSYLLQESTSREVVFTFSSELEIVECGVQIWKDESERNQSA YSKPGNGEEEDVSNNQQDTYNISRAWDEEEAEEYVNLNPAKRTKR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |