Names & Information

Knowledge of BnaC09G0193300ZY:

Gene Name
BnaC09G0193300ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g17030D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1
NT seq
Len:2607 nt

ATGACCGTTTTCTATGAAGTGGATCCAACTGATGTAAAGAAGCAGAGAGGAGAGTTCGGAAGGGCTTTCAAGAAAACGTG
TGTTGGAAGGAAACAGGAGGAAATCGCCAGATGGAGACAAGCTTTGGCGGAAGTAGCCACAATTGCCGGAGTGCATTCAA
CCAAATGGGATGATGAAGCGGCCATGATTGAAAAAATTGCCGTTGATATTTTTAACAAGTTGAATTATTCCAAGTCATCC
AATGATTTTAACAACATAGTTGGGTTGGAAGCTCATTTGGAAAACATGGAATCATTGTTATGCTTACACTCAGATGAGGT
GAGGATGATTGGGATTTGGGGTCCGTCTGGGATTGGTAAGACCACAATCGCCAGACATCTTTTCAACCAGGCCTCTAGCC
ATTTCCAACATAGTATCTTTGTGGAGAACATCAAAGCATCAATGCATACGAGAAGAACCAGCTCTGATGACTACACTGCG
AAGTTGAACTTGCAGCAACAAATAATGTCTCAAATATCCCCGAAGGATGTCAAGATTGGCCATTTAGAAGCTGTGAAAGG
TCGATTGTTTGATAAGAAAGTTCTTGTCGTACTTGATGACGTGGATGAGTCAATGCTACTAGAAGCTATGGCGAATGAAA
CTTCATGGTTTGGTCGTGGAAGCAGGATTATCATCACCACTCAAGATCAAAATGTCCTGAGGGCACATGATGTCCAAGAT
GTTTATAGAGTGGATTCCCCACCAACTCATACTGCTCTTAAAATCTTTTGCCGGTATGCTTTCCGTCAAGATTCCCCATA
TGCGGGTTTCGAGAAGCTTGCTGGGAAAGTTACAAATCTTGTCGGTGAACTCCCTCTGGGACTAAAGGTTATGGGCTCCT
ATTTTCGGGGAATGTCCAGGCAGAAGTGGGAAAAATCACTACTAAGGTTAACAAAGCACCTTGATGGAAGCATTGCGAGG
ATTTTGAAGTTTAGTTACGATGCCTTAGACATGGAAGATAAAGTGTTATTTCTTTATATAGCTTGCTTTTTCAACTATGA
AAGCATTGCAAAACTGGAGAAGTATCTTGCAAATGAGTTCTCGGATTTGAGATCAGGGTTTGACATCTTAGCTGAGAAAT
CTCTCATATCTATGAATAACTCAGGTTATTTAGAGATGCAAAAGTTGCTAGAGCAATTGGGTAGAGATATTGTTCATCAA
GAGTACATTCGTGAGCCTGGACGACCTCAGTTTTTAGTTGATACAAGAAATATTCGTGAAGTACTTACTAACAATACTGT
TAGCACAAATGTTCGAGGCATTAAATTTGACTTGTCTGAACTCTCGAAAGACTTAAATATAAGTGAGAGAGCCTTCGAAG
GACTATCCAATCTTCAGTTCCTAAGATTCCACTATAGAATTGGTAACCGGAGAAACCAACTGCACTTACCACGAGGTCTG
AACAACATACCCACAGGACTTAGGATACTACATTGGGATCAATTTCCGGGGACAAGTTTACCTTCAGATATGAATCCGCA
GTCCCTCGTTGAACTAGTAATGCATGGCAGCAAGCTTGAGAAGTTATGGGAAGAGACTAAAGAAATGGATTTGAATCAAT
GCACAAGTTTGGTGGAGCTTCCCTCCTCTATTGGTAAAGCCAGTAATCTCAAGAAACTGGATCTCGTACACTGCTCAAGT
CTGGTACAGCTTCCCCCGTCGATTGGAGATAACACTAATCTGCAAAACCTGGATCTCAGTAATTGCTCAAGTCTGGTGGA
GCTTCCTTCATCAATGGATAATCTCATTAACCTTGAGAAACTTAATGTCAGCCACTGTTCAATTATCGAACAGTCCATCG
GAAGTGCCAGTAATCTAGAAAAACTGGATCTCAGTAATTGCTCAAATCTTGTGGAGCTTCCTTCCTCCATCGGAAATGCC
ATAAATCTGCTGTACTTGAGTCTTATAGGATGCTCGAGGTTGGTTAAGCTCCCCAGCTCTATGGGGAATCTCACTAGTCT
CAAGATATTGTATCTCAATAACTGCTCAAACCTGGTGGAGCTACACTACACTATCGGCAATGCCATTAGTCTTGAGAAAC
TAGATCTGAGTAATTGCTCAAGCCTGGTGAAGCTCCCGCACTCCATCGGGAAGGCCACTAATCTTCAGAAACTGAAGCTC
GTTAATTGCTCAAGCTTGGTGGAACTCCCATCCTCCATAGGAAACCTCTTTAAATTGCAGTTGCTGTGTTTGAAGGGGTG
CTCTAAGCTGGAGGTTCTTCCGATCAACATTGACATGCAATCTCTGAACGAGCTTGATCTCACTGATTGCTCTTTGCTGA
AGTCATTTCCCCAGATTTCGACATACATTGGAGTGCTTAGGCTAAAAGGAACAGCAATAAAAGAAGTTCCTTCATCTACG
AGGTTATGGTGCCGTCTTGCTACACTGCAGATGTCATACACTGAAAGCCTCAACTCATGGAGGCCCCTCGTGTTCATGAA
CACGATGTATCCTCAGACAGCGACATCGGAGGCAACCACTAAACTGAAGATTATGGCAAGCAGCTGGAGACCAAAACAAG
TAAACATTCTTCTGTCTGGTGCTTGTAAAGATGATGATGACAGGTAA
AA seq
Len:869 aa

MTVFYEVDPTDVKKQRGEFGRAFKKTCVGRKQEEIARWRQALAEVATIAGVHSTKWDDEAAMIEKIAVDIFNKLNYSKSS
NDFNNIVGLEAHLENMESLLCLHSDEVRMIGIWGPSGIGKTTIARHLFNQASSHFQHSIFVENIKASMHTRRTSSDDYTA
KLNLQQQIMSQISPKDVKIGHLEAVKGRLFDKKVLVVLDDVDESMLLEAMANETSWFGRGSRIIITTQDQNVLRAHDVQD
VYRVDSPPTHTALKIFCRYAFRQDSPYAGFEKLAGKVTNLVGELPLGLKVMGSYFRGMSRQKWEKSLLRLTKHLDGSIAR
ILKFSYDALDMEDKVLFLYIACFFNYESIAKLEKYLANEFSDLRSGFDILAEKSLISMNNSGYLEMQKLLEQLGRDIVHQ
EYIREPGRPQFLVDTRNIREVLTNNTVSTNVRGIKFDLSELSKDLNISERAFEGLSNLQFLRFHYRIGNRRNQLHLPRGL
NNIPTGLRILHWDQFPGTSLPSDMNPQSLVELVMHGSKLEKLWEETKEMDLNQCTSLVELPSSIGKASNLKKLDLVHCSS
LVQLPPSIGDNTNLQNLDLSNCSSLVELPSSMDNLINLEKLNVSHCSIIEQSIGSASNLEKLDLSNCSNLVELPSSIGNA
INLLYLSLIGCSRLVKLPSSMGNLTSLKILYLNNCSNLVELHYTIGNAISLEKLDLSNCSSLVKLPHSIGKATNLQKLKL
VNCSSLVELPSSIGNLFKLQLLCLKGCSKLEVLPINIDMQSLNELDLTDCSLLKSFPQISTYIGVLRLKGTAIKEVPSST
RLWCRLATLQMSYTESLNSWRPLVFMNTMYPQTATSEATTKLKIMASSWRPKQVNILLSGACKDDDDR*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0000166
Pfam
Leucine Rich Repeat
KEGG
disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A)