Names & Information
Knowledge of BnaC09G0193600WE:
| Gene Name | BnaC09G0193600WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g14870D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:2697 nt ATGAGGGGTTTGAAGTTAAACAGAGGATACACATTTCAAAACTATAATGACAATCATCAAATGCTGGTTTTTAAGTTTCT CCGTCTCCTTGACGGAACCCATAAAAGGATCAATGTGGAAATCGGATGGTCACAATTGAGGAACAATGAAGCAAAAATGA TTGAGAAGATTGCCTTAAATGTTTCAGACAATCTAAATGCTACACCATCTAGGGATTTTGATGGGATGGTAGGACTTGAG GGTCATTTGGGGAAGATTCAATGTTTGTTAATTTTAGAAAATGATGAACCTATGACCTTAGGAATCTCTGGTCCTGCGGG TATTGGTAAAACTACCATTGCAAGAGCTTTATACAACCAACTCTCTCCTGATTTTCCGCTTAGATATTTCATGGAAAATG TTGGAGGAAGTTATAGGAATATTGGTTGTGGTGACCATGGTTCAAAGCTGCGTTTACAAGAAGAGCTTCTTTTGCACATT TTGAACCAAACCAATATAAATGTATGTCACTTAGATGTGATAAGTGAAAGGTTATGCAACCAAAAGGTTCTTATCGTTCT TGATGATGTAGATAGTCTTGATCAGCTAGATGCTCTGGCTAAAGATATATATCATTTTGGTTCCGGAAGTAGGATTATTG TGACTACGAAAGATCAAGAGCTTTTGGAAAGATATGGCATTACCAATACATACCATGTGGGTTTTCCATCTAATGGAGAA GCTCTTGAGATCTTCTGTAGATATGCTTTTAGAAGAAACTCTCCAAAATATGGTTTTGAAAAGCTGGCAATAAGAGTAGC GGAGCTTTGCGGTAATCTTCCGTTAGGTCTACGTGTTGTGGGCTCATCTTTAGGTGGGAAAAGTGGGGATGAATGGGAAG TTATTATCCATAGGCTAGAAACTAGTCTTGATGAAGATCTTGAGAGAGTATTAAGAGTCGGATATGAGACTTTACATGAG AAAGATCAAGCTCTGTTTCTTCACATTGCTATATTTTTCAACAACAAAGACCAAGATTACGTAAAATCCATGCTCCATGA CTGTAATTTGAATGTTGAACATGGGTTGAGAAACCTAGTCAATAGATCTCTCATAGACATATCTACCAATGGAGAAATAG TGATGCACAGCTTACTACAACAAATGGCTAGACAAGTCATTCAAAGACAAGAACCTTGGAAACGCCACATTTTAATTGAT CCTCGTGAGATTTGTGATGTTCTTGAATATGAGACAGGGACTAGAACAGTGTGTGGCATATATTTCGATACATCAGAAAC AGGCGAAGTGTTTGTAAGCAAGGGAGCTTTAAAAAGAATGCGTAACCTTCAGTTCCTGACTGTCCACAAAAGAAAACACT GTGAAAAAGACATAGTGTGCATACCTCAGGACTTGGAGTTTCCACCTCGTCTTAAGTTACTACATTGGGAGGTGTACCCA AGAAAGAGTCTCCCTATGAGATTTCATCTCGAAAATCTGGTCGAACTCAATATGCGCGATAGCCAGCTCGAGAAGCTCTG GGAAGGATCTCAGCCCCTCACAAATCTCAAGAAGATGGATTTGGCAATGTCCTGTCATTTAAAAGAACTCCCAGATCTTT CAAATGCAACAAATCTCGAGAGACTAAATCTGAATGACTGCGAGAGTCTGGTAGAGATTCCATCCTCTTTTTCAAATCTT CACAAGCTAAAAGCGTTGAGCATGTTTGCCTGCACAAAGCTAGAAGTCATTCCAGCTTACATGAACTTGGCATCTCTTGA ATCGGTTGATATGACTGCATGCCAAAGATTGAGAAACTTTCCAGACATCTCTAGGAACGTCTCAAAGTTCTCTATCTCAG TCGAGGAACTAGACCAAGTGCCTGAGTCTATCAGGCTTTGGTCTCGTCTTCGTGTTCTCACCATAACCAGCAAAGGAAAA CTAAAGTCCTTAACACATCTTCCCCAAAGTGTAAAGCATCTACACCTAAGCTGCATTGGTGAGCAGAGGATTCCATATTT CAAGAAAAGTCTCCAGCGGGTAGAACTTTATCTAAACAGCTGCAGAAGTTCACTACTCAGGGAAGATTGTGAACCCAAGG AGGGACTTACTTGTCCTTATGACACTCCATACACGCAACTCGATTACACGAACTGCTTCAAACTGGACCGAGAAGCACGG ACAGCAATTTTAACAGAACATTTTGCTCAAGGCTGGGCTTGTTTACCTGGAGGAGAAGTGCCTGTAGAGTTCGATCACCA AGCCAAAGGAAATAGTGTGACCATACATCCCGTGAGTAACATGTCTCTCACCATTTTCAAGGTTTGTGTGTTGATTTCTC CTAACCAGCAAACCAGAGAATCGGAACAACTAGCGTGTTGTCGTATAAGCAAAGGGATTGAGGAGATCAGTGTTTATGCT ATTCCTAGGATTCAAAGAAAACATTTATTTCTATTTCCCTCATACTTATTGCAAGAATCTACTAGCAGAGAGGTTGTGTT TACATTCAGCAGCGAACTCGAGATTGTTGAATGCGGTGTCCAAATCTGGAAGGATGAATCAGAAAGAAACCAAAGTGCAT ATAGTAAACCAGGAAATGGTGAGGAAGAAGATGTCAGCAATAACCAGCAGGACACATATAACATCAGCAGAGCTTGGGAC GAAGAAGAAGCTGAGGAGTATGTGAATCTGAATCCAGCAAAGCGTACAAAGAGATGA |
| AA seq | Len:899 aa MRGLKLNRGYTFQNYNDNHQMLVFKFLRLLDGTHKRINVEIGWSQLRNNEAKMIEKIALNVSDNLNATPSRDFDGMVGLE GHLGKIQCLLILENDEPMTLGISGPAGIGKTTIARALYNQLSPDFPLRYFMENVGGSYRNIGCGDHGSKLRLQEELLLHI LNQTNINVCHLDVISERLCNQKVLIVLDDVDSLDQLDALAKDIYHFGSGSRIIVTTKDQELLERYGITNTYHVGFPSNGE ALEIFCRYAFRRNSPKYGFEKLAIRVAELCGNLPLGLRVVGSSLGGKSGDEWEVIIHRLETSLDEDLERVLRVGYETLHE KDQALFLHIAIFFNNKDQDYVKSMLHDCNLNVEHGLRNLVNRSLIDISTNGEIVMHSLLQQMARQVIQRQEPWKRHILID PREICDVLEYETGTRTVCGIYFDTSETGEVFVSKGALKRMRNLQFLTVHKRKHCEKDIVCIPQDLEFPPRLKLLHWEVYP RKSLPMRFHLENLVELNMRDSQLEKLWEGSQPLTNLKKMDLAMSCHLKELPDLSNATNLERLNLNDCESLVEIPSSFSNL HKLKALSMFACTKLEVIPAYMNLASLESVDMTACQRLRNFPDISRNVSKFSISVEELDQVPESIRLWSRLRVLTITSKGK LKSLTHLPQSVKHLHLSCIGEQRIPYFKKSLQRVELYLNSCRSSLLREDCEPKEGLTCPYDTPYTQLDYTNCFKLDREAR TAILTEHFAQGWACLPGGEVPVEFDHQAKGNSVTIHPVSNMSLTIFKVCVLISPNQQTRESEQLACCRISKGIEEISVYA IPRIQRKHLFLFPSYLLQESTSREVVFTFSSELEIVECGVQIWKDESERNQSAYSKPGNGEEEDVSNNQQDTYNISRAWD EEEAEEYVNLNPAKRTKR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |