Names & Information
Knowledge of BnaC09G0197800GG:
| Gene Name | BnaC09G0197800GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g17420D [Brassica napus] |
| Best Hit (SwissProt) | Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1 |
| NT seq | Len:1401 nt ATGACGGTGTCCGGTGAAGAAGTCCCACCGCAGCACCAAGTTTTCATCAACTACAGAGGAGACGAGCTGCGGAAAAGCTT CCTCGGGTTCGTAGTGAAAGCCATGAGAGAAGCAAAGATCAACGTCTTCACAGACGAAGTAGAAGTCAAAGGTAGAGATC TACAGAATCTTTTCAGGAAGATCGAGGAATCCAGAGTCGCTGTTGCGATCTTGTCTGAAAGATACACAGAATCTAGTTGG TGCTTGGATGAACTAGTGAAGATGAAAGAGCAGATGGACCAAGACAAGCTCGTTGTGATTCCAATTTTTTACAGATTGGA CGCTACCAACTGTAAGAGGCTCGTTGGAACTTCCGGTGACAATTTCAGGAATCTGGAGAGAGAGTATCGGAGTGAGCCTG AGAGAATCAAAAATTGGAAAGAAGCTTTGATCTCTATTCCCCAGAAGGTTGGCTTGACTTTGGCAGGACACAGGGATGAG TCTGAGTTGGTCGATTCAATCGTTAAGGAGGTGAAGAAAGTTCTAATCGATGTTTCAAGCAAGAAAAGAGGTCAGTCCAC AAATCACCGAACCCAAACTGACATCATATCATCATTTGAGCCTCTAGTGGCAGAGCTGGACCGACTACCATCACGTCTCC CTCAAGTGTTTGTCAGTTTCTGCAAAGAGGAGCTTGGCGACAACTTTGTCAAACATCTCGTGTGGGCTTTGAGAGAATTA GGGGTCAATGTACTCATGGACAGCTACAACCGTAGAGGAAAAGAAGACGAACAACAACAAGTATTCACGAGTATAGAGAA GTCGAATATCGTGCTAGCCATCTTCTCAAAAAGGTACTCGGAATCAGATAGGTGCTTGAACGAGCTTGTGAAGATGGAAG AGCTTACAAAGGAAGGAAAACTCGTGGTCATCCCCGTATTCTACAATGTGAAAACAAACGAAGTGAGAAGACTCCAAGGA GAGTCTGGAATCCATTTTGCCGATTCATTGAAGAGGTTTTCTATGGAGCCAATGTTGGTCCAGAGCTGGGAGGAAGCTTT GAATTTTATTATCAAAAGGAGTATTAAGAAAATAAAAATAATCAATTCTTGTTTTATAGCAAGACTTTGTGTTTGGTCAT CTGAATCAGTTTCGTTCACTCATGTGTTCAGAAACGAATTTGCTCTTGTTGCTGCTATTGTTAAAGAAGTTACAAGATTG CTACCAAGCTCTCGAAGAATGAGAAGACGAAGGAGATTAGGGATTGGAGAAGTTTTTATCAGGGCTTTAACAGCTACTTT TCTATTTGCTCTCTTCATGTCCCCTATGCGTCGTACCCCTGAAGTGAACTTTCTCAAAATTGGTAACTTGCTAGTTGGGT TTCCGTTTTTGGTTGTTGTCTTGCATAAAATTCTATGTTAA |
| AA seq | Len:467 aa MTVSGEEVPPQHQVFINYRGDELRKSFLGFVVKAMREAKINVFTDEVEVKGRDLQNLFRKIEESRVAVAILSERYTESSW CLDELVKMKEQMDQDKLVVIPIFYRLDATNCKRLVGTSGDNFRNLEREYRSEPERIKNWKEALISIPQKVGLTLAGHRDE SELVDSIVKEVKKVLIDVSSKKRGQSTNHRTQTDIISSFEPLVAELDRLPSRLPQVFVSFCKEELGDNFVKHLVWALREL GVNVLMDSYNRRGKEDEQQQVFTSIEKSNIVLAIFSKRYSESDRCLNELVKMEELTKEGKLVVIPVFYNVKTNEVRRLQG ESGIHFADSLKRFSMEPMLVQSWEEALNFIIKRSIKKIKIINSCFIARLCVWSSESVSFTHVFRNEFALVAAIVKEVTRL LPSSRRMRRRRRLGIGEVFIRALTATFLFALFMSPMRRTPEVNFLKIGNLLVGFPFLVVVLHKILC* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |