Names & Information
Knowledge of BnaC09G0199500GG:
| Gene Name | BnaC09G0199500GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g18900D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:2397 nt ATGGATGCATTCAGAACAGCTGACTCAATCCTCCACCTCATTGACTCGGTCATTCGAAAACGGATTGCGAGCTACAGACT GGAAAACCCTGCCCTCTCCTCTTCCCTTCTGCAACGATGGCTAGCCACTCCTGCAACTCCTGCTTGCAACAAGGTCAAAA TCAGCTTCGACAGGTCGGATGAGACAATACGATGCTCCCTCGTTCCCCATCTATCCGCTGCTTTTGGTCGTAAAGGCATT TCTGTGCTCACAGATAAGCATGATGAATTTTGCAAGTGCATTGCTTCTGTTTTTATTTTCTCTAAGAATTACGTGTCCAT CAAGGAATCTTTGGATGATTTCTTTAAGACTAGCCAACGGAGGCATGGCAAAGGCCATGTCGTGGCCACTGTCTTTTATG GAGTCAATAGATCAGAATTGGAGGAAAACGTCGCCAAGGCGCTCTCTGAGCATTGTACTTCATATCAAGCAAGTCAATGG CTTGAAGAAATCATAACTCTACCTGGCCACGAAAAAATCAATAAACAAAGTGACTGCGAATTTGTGGAAAAGATTGCTAC TGATGTTTATGAGAAAATCTTTCCGAAAGAACGAATCGGAATCTACTCAAGGATGCTTCAGGATATAAGTAACTTGCTAT GCAGTCAACAATGGGGAGTCAAAAGCATAGGGTTTTGGGGCATGCCAGGCATAGGAAAGACGGAGCTTGCTAAAGCAGTC TTTGACCAAATGGCTAGTGACTATGAAGTAACTTGCTTCCTCGAAAACTTTCATGAAACTTTTGAAACGAAGGGACTTTA CAGTTTGCTGCAGGAACATTTCAAAAACCTTACAAATCAAAACATTCCAAAAAGAGTTCTTCTTGTTCTTGATGATGTAA GGAATCATCTATACGCAGAGTCTTTACTTGCTGAGCTTCCCTCGTTTAGTCTTGGAAGCCTGATCATCATAACCTCCAGA GATGACCAAGTCCTTTCTCAGTATCAAGTCAATCAAACTTACAAAGTTGAAGGATTAAACAAGCTCGAGGCTATGCAGCT ATTTTCTTTGTGTGCCTTTGAAAAAGATGTGAAAGAGACTAATCTTCTTAAAGATAATTCTATGAAGGTGATCGAATACG CTAATGGAAACCCTTTAGCTCTAAGAGTATACGGAAAAGAGATGTCATCACACGAGCAAACAAGTCAAAAGGAGACTTTG TTCCTCAAGCTCAAGCAAGATCCTCCCCATCAGATTATGGAAGTAGTCAAGAGTAGCTATTATGCACTAAATGATAACGA GAAGAACATACTTGTGTATATTGCGTTTTGCTTCACAGGCAAACATGTTGAAGATGTGTCGAAACTACTACAAGACCTTG GTTTCTTCCAAGAGATTGGGATCGACCGGCTTGTGGCCAACTCTCTGGTGACTATTTCAGAAAACAAGTTGGAAATGCAT AACATGATTCAGGGGGTAGTCAAGAAAATAGGGAGGTGCAGTGAAGACTCCAACACAAGTTTCAAATGTGTATTGGTAAT GTCTTATTCTACCATATTTTTCAACCAATTATCTTCTACATCATCCATAAGCTCTTATGTTATGTTATTTCAGGGCACTA CCGACATCGAAGCCATATCTCTGGATGCATCTAACTTAAACCCGGATGTGGAACTTTCTTTATTCAGATCTATGTACAAC CTTAGATACCTGAGTATTTACTATAGTAATCCTGGAAAACATGGCAAGGCCCTTGAGTCTTTCTCTCTGCCTTATGGGCT TAGATTTTTCCATTGGGAGACTTACCCTTTGAAATCTTTACCTCAAGATTTTGATCCAAGCAACCTTGTTGAACTCAACA TGCCTTACAGTCAACTACAAACTCTTTGGGGAGGAACCAAAAACCTTAAGATGCTGAAGAGGATCAACCTTAGACATTCT CAGAAGCTGCTCGAAGTTAATGAACTTTCAGAAGCTCGAAACCTCGAGCAAATTGATCTCTGCGGCTGTAAGAACTTGCA GAGTTTCCCATCCATTCGTAATTTGCATAAGCTCAGAGTTGTTGATCTCCCTAGTTGCATAAAGATCAAAAGTTTCCCTG AGTTCCCATCTAATGTCGAATTAAAATTCGAGGGATCACCCATCAAGACCATGTATCCTCCAGTCCCACTGATCAGAGTC AAGAGCTTATGCGAGTTCCTAGACAATCCGACAAAACCCTTGAACTTCGAGCGTCATGGTCCCTATATCTTAGATATTCT GAGACCAGGAAGCTTCTTGAATAGCCAAAAAAGGATAACAAATCCAGATATGGTGGAAACACCACCTACATTTAAAGATA TAATGTGTGAAAAAGCAATCTTGATGAGCCAATGGGCGTTGGAAAACCTAAAAAGTTTTCGAAAAGTGGATTTCTAA |
| AA seq | Len:799 aa MDAFRTADSILHLIDSVIRKRIASYRLENPALSSSLLQRWLATPATPACNKVKISFDRSDETIRCSLVPHLSAAFGRKGI SVLTDKHDEFCKCIASVFIFSKNYVSIKESLDDFFKTSQRRHGKGHVVATVFYGVNRSELEENVAKALSEHCTSYQASQW LEEIITLPGHEKINKQSDCEFVEKIATDVYEKIFPKERIGIYSRMLQDISNLLCSQQWGVKSIGFWGMPGIGKTELAKAV FDQMASDYEVTCFLENFHETFETKGLYSLLQEHFKNLTNQNIPKRVLLVLDDVRNHLYAESLLAELPSFSLGSLIIITSR DDQVLSQYQVNQTYKVEGLNKLEAMQLFSLCAFEKDVKETNLLKDNSMKVIEYANGNPLALRVYGKEMSSHEQTSQKETL FLKLKQDPPHQIMEVVKSSYYALNDNEKNILVYIAFCFTGKHVEDVSKLLQDLGFFQEIGIDRLVANSLVTISENKLEMH NMIQGVVKKIGRCSEDSNTSFKCVLVMSYSTIFFNQLSSTSSISSYVMLFQGTTDIEAISLDASNLNPDVELSLFRSMYN LRYLSIYYSNPGKHGKALESFSLPYGLRFFHWETYPLKSLPQDFDPSNLVELNMPYSQLQTLWGGTKNLKMLKRINLRHS QKLLEVNELSEARNLEQIDLCGCKNLQSFPSIRNLHKLRVVDLPSCIKIKSFPEFPSNVELKFEGSPIKTMYPPVPLIRV KSLCEFLDNPTKPLNFERHGPYILDILRPGSFLNSQKRITNPDMVETPPTFKDIMCEKAILMSQWALENLKSFRKVDF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |