Names & Information

Knowledge of BnaC09G0209700ZY:

Gene Name
BnaC09G0209700ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g19010D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1
NT seq
Len:3555 nt

ATGGCAACGTCGACTTCGTCAAACCCAGTACACCAGCCGCCACAACACAAAGTGTTTTTAAATTTCCGGGGAGCTGATCT
ACGCCTTAATTTCATAAGCCATCTAGTAGGTGCCCTTCAAATGGAAGGAATCAACTATTTCATAGACGAAGATGAGATGA
GGGGAGAAAAGCTAGAGAAACTCTTCAAGACGATTGAGGAGTCGAGCATCGCGATTGTTGTTATTTCAAGTAAGTACACG
GAGTCAGAATGGTGCTTGAACGAGCTGGCGAAGATTAAAGAGTGTGTGGAGGAAGAGAGAATGAGGGTATTCCCGGTGTT
CTACAAAGTGACAGTCGCTAGCGTGAAGGACAAAAAAGGAAACTTTAGGGATTATTTGACAAAACTTAGTTCTGATAGAA
AAGAAACATGGGAGAACGCTCTCGACTTTGTGACCTCGAGGTTAGGCCAGACAGTGGACGAAAAGAGTTGCGAGGGAACT
GCGATTAAAGCAATCGTAAAGGCAGTAATGAGACTGCTAGATGACATTTCAACAAAGCGAGCAGATGGTCGAGGAGGGAC
ACAGAAGAAATTGCTGACAGAAAAAGGAGCAGAAGACAGGACTTGTTCAGACACATCTTCTTTGTATGGAATGGAGACAC
GCACAAAGCAATTGGAAGATAAGTTAGAACTTCAACCGAAAGTCACTCGCATTGTTGGTGTTGTTGGGATGCCAGGTATA
GGTAAGACCACTCTTGCCAAGAAAGTTTTAGAGAAGCAGAGACAGAGATGCAAATTCATGTACACGGTGTATCTGGGTGA
GATCTGCAAGAAATCAAAGTTGCTTCCCCTCAACAGACTGCATGAAGACCTCCTCCTTGAATTATATAATTGGAAAAACA
ATGGGAATGAGAAACAACAGATGAATTCCAATTTCTCACTAGACAAATTTAAGGCTGGCTTAAGCAAGAAAAAAATATTT
GTTGTTCTTGACGATGTGAGTGACAAGAAGCAGTTAGATGCGATTCTTGAGAATAGGGAGTGGATATGCGAAGGAAGCAA
AATTGTCATTATAACAAGGAGCGAATCCGCTGTAAAGGGAATAGTCAATGATACTTTTTTCGTCCCGGGGCTGAGCCACA
TTGATGCGTTAAAGCTCTTCAACTACCACGCATTTTCTAGTGCAGACTATTGCGGCGACCCAGGTCTTAGGAAGCTTGCA
GAAGAGTTTGTGGATTACACACGAGGACATCCATTAGCTCTCAAGGTACTTGGGGGTGAGCTTCATCTGAAGGATAAGGC
ATACTGGGAATCAAAGCGAGCAATGTTGACTCAAGGCCTGAGCAACATAATTCAAGATGGCTTGAGAGTACCTTATGACG
ACCTTAGCGAGCACCACAAGAACGTGTTCCTCGACATCGCCTGTTTCTTTAGGTTCGGTGATGAGAATCATGTGAAGAGT
TTGTTGGATTCTTCGCTACATGATGATGATATTAAAGTTCTCGCAGATAAGTTCTTGATCAACATTTGTGCTGGTCGACT
GGAGATGAATGATATGTTTTATACTTTAGCGATGGGACTCCTTTCACAAGCATCCGCTGAAAACACAAAAAGCGGTTGTA
GGCTCTTCAACCATGGGGATATTGTTGGTGTCCTAAATACCAAAGCGCAAGCAACCAAGGTCAGAGGAATATTCTTCGAT
GTGTCTCAAGTCACGAAGAACGTGATGTTAGATAGTGACACATTTGCAAGCATGGGTGATCTCAGATACTTGAAATTCTA
CAATTCTCGTTGCCCTAAAGTATGTGAATCTGAATGCACAGTCAACTTCCCTGACGGAGTTGAGTTCACATTGCAAGAGA
TTCGGTATCTCCACTGGCTGAAATTTCCATCCGAGAAGTTTCCACAAGAATTTGACCCCAGGAATCTTATAGACCTCAAG
CTGCCATACAGCAAGATGGAGCAGATTTGGGACGGAGACAAGGATGCATCAAAACTAAAGTGGTTGGATATGAATAACTC
GTGTAAGCTGCGCACATTGACTGGTTTATCGCAGGCTCGAAACCTTCAAACTTTAAACCTTGAAGGCTGCACAGAACTGA
AGGCGGTTCACGAAGAGGTTCAGAACATGGATAGTCTCGTATTCCTGAACCTGAGAGGATGCACGAGTCTCGAGTCTCTT
CCAGAGATGAACTTAATCGCTCTGAAAACTCTTATCCTTAGCGGCTGCTCAAGGTTTGAGGAGTTCCATATTGTTGGAAA
GAATCTGGAAGAACTCTACCTAGATGGTACAGTGATAAAAGGACTTCCTTCAACGATAGGGGACCTCCAAAGTCTAGTCT
TGCTGAAACTGAATGACTGCGTACACCTTTCAAGCCTCCCCGATACAGTCGGAAACCTAAAAGCACTTGAAAAGCTGATA
CTTTCTGGTTGTTCAAAGCTTGAGACATTACCAAAGTTTCAAACAGCGTTGAAGACTTTACTATTCGACCGAACAGGCAT
ATATTTCCCCCAGCAACTGCCATGTGGAAGCTTCTTGTTATCATCTGTGCGACATTTATGCCTGAGTAGAAACATTTTCA
AAAGCTTGCCGAGCGAAATCAGTTTGCTATATCATCTCAAGTGGCTTAACTTGAAGTATTGCAAAGAACTTAGTTCTGTA
CCAGTGCTTCCACCAAATCTTGAATTGTTAGATGCACACGGCTGCATTTCACTTGAAAAGGTGGCGGACCCATCGCCTCT
TTGGTTAGGGGAAACTAAGCATGTACATTCCACGTTTAACTTCAGTAACTGTAACAAACTTGATCAAGTTGCAGAGAATA
GTATTGAAACCTACGTTCGGAGGAAAATTCAGTTGATGTCAAATGCAGTGGCCCTATACGACGAGGGCTTTTTTCTCGAT
GTTTCGATCAGAATCTGCTATCCTGGTTGGCAGTTACCTGTATGGTTCAGTCACCGAATGGTTGGGTCAGTTTTGAAGGC
AGAGTTGCCAAGGCACTGGAGTGATGGTGGGATTACCGGTATAGCTCTTTGCGCTGTTGTCTCATTCGCAAACTCTCAAA
CTCAGAATAGCCGTCTTTCTGTAAGATGCACGGGAGAGTTCACGGAGAAAAACAGGTCTCGTATCCGCTTTAACTGCATT
CTTGGAGGCTGCAATGAACACGACAGCGACAAGCCCATGGAAATCGTATCTAGTCATGTCTTTATTGGCTACATGAGTTG
GTCTCACATAAACAAGTGTAATGGAGAAACTGACAATAGGAATGATTGTGTTGCTACGGAAGCTTCCGTTAAAGTCCAAG
TGATAGACGGGACAAGGCAGGTTACAAACTGCGAGGTGCTCAAGTGTGGCTTTAGTCTGATCTATGCATCCACTGAAGCT
GATCATGGCTTGTCACCGAAAAAATCATCTGGTGTAATTTCCGCTACAAATGACGTCATCCATGGTGATACTGGAAGCAA
CACCCAAAGTGAAGAAAGTTATGATGCAGCTTCATCAAGAAAGGACAGTGAGATCAGCGAGGAAAGAGGGTCTGAAACTG
ACTATGATGCAGTGAAATGGTTGTATCTGCAGTGA
AA seq
Len:1185 aa

MATSTSSNPVHQPPQHKVFLNFRGADLRLNFISHLVGALQMEGINYFIDEDEMRGEKLEKLFKTIEESSIAIVVISSKYT
ESEWCLNELAKIKECVEEERMRVFPVFYKVTVASVKDKKGNFRDYLTKLSSDRKETWENALDFVTSRLGQTVDEKSCEGT
AIKAIVKAVMRLLDDISTKRADGRGGTQKKLLTEKGAEDRTCSDTSSLYGMETRTKQLEDKLELQPKVTRIVGVVGMPGI
GKTTLAKKVLEKQRQRCKFMYTVYLGEICKKSKLLPLNRLHEDLLLELYNWKNNGNEKQQMNSNFSLDKFKAGLSKKKIF
VVLDDVSDKKQLDAILENREWICEGSKIVIITRSESAVKGIVNDTFFVPGLSHIDALKLFNYHAFSSADYCGDPGLRKLA
EEFVDYTRGHPLALKVLGGELHLKDKAYWESKRAMLTQGLSNIIQDGLRVPYDDLSEHHKNVFLDIACFFRFGDENHVKS
LLDSSLHDDDIKVLADKFLINICAGRLEMNDMFYTLAMGLLSQASAENTKSGCRLFNHGDIVGVLNTKAQATKVRGIFFD
VSQVTKNVMLDSDTFASMGDLRYLKFYNSRCPKVCESECTVNFPDGVEFTLQEIRYLHWLKFPSEKFPQEFDPRNLIDLK
LPYSKMEQIWDGDKDASKLKWLDMNNSCKLRTLTGLSQARNLQTLNLEGCTELKAVHEEVQNMDSLVFLNLRGCTSLESL
PEMNLIALKTLILSGCSRFEEFHIVGKNLEELYLDGTVIKGLPSTIGDLQSLVLLKLNDCVHLSSLPDTVGNLKALEKLI
LSGCSKLETLPKFQTALKTLLFDRTGIYFPQQLPCGSFLLSSVRHLCLSRNIFKSLPSEISLLYHLKWLNLKYCKELSSV
PVLPPNLELLDAHGCISLEKVADPSPLWLGETKHVHSTFNFSNCNKLDQVAENSIETYVRRKIQLMSNAVALYDEGFFLD
VSIRICYPGWQLPVWFSHRMVGSVLKAELPRHWSDGGITGIALCAVVSFANSQTQNSRLSVRCTGEFTEKNRSRIRFNCI
LGGCNEHDSDKPMEIVSSHVFIGYMSWSHINKCNGETDNRNDCVATEASVKVQVIDGTRQVTNCEVLKCGFSLIYASTEA
DHGLSPKKSSGVISATNDVIHGDTGSNTQSEESYDAASSRKDSEISEERGSETDYDAVKWLYLQ*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0005515
Pfam
Leucine Rich Repeat
KEGG
RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A)