Gene Name | BnaC09G0209800ZY |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaC09g19000D [Brassica napus] |
Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
NT seq | Len:2178 nt
ATGGCGACTTCGAGCTCCACAGTTCAGCATGACGTATTTATCGCTTTCAGCTCAAGGGACACACGGTACTCTTTCGTCAG
CCACCTCTCGGCCGCTTTCCGGCGAAGTAAGATCAGTTTCTTCGTAGGCGATGCTCAGGAGGAGGCGGAGGCGGTGGCAG
TGACGGAGGCTGCAATAGAAGGCTCTAAGGTTTTCGTGGTTGTCTTTTCCGAGAACTACGCGTTTTCCAGGCTCAGCTTA
GACACGCTCGTGAAGATTATGGAGCGTAAACACAACGACGACGTGCCGGTGGTTCCAATCTTCTACGGTGACGTCACTTC
AACAGTTGTCAAGTGCCAGACGAAACGATTCGGAGAAGCATTCTCCGAACACCGAAGTTTGTATTCCGACCAGATAACTA
AATGGCAAAACTGTCTGATTGAAACGGCGAGCTTATCTGGTCATGAATCAATTTGTCAACCAGTTGAGTCGGAGTTAGTA
AAAGAGATTGTCGCGGATGTGCGTGAGAAGCTGATTCCCACGGGTTTGGTAGGGTTCTACTCGAGGTTTGTCGAGATAGA
AAACTTGCTATGGAAGCAATCTAAAGGCTATTGCCGTTTAGGGATCTGGGGAATGCCTGGCATAGGCAAAACAACCATTG
CTCAAGCAGCCTTTGACCTATTGAGTCCAGACTTTGAAGTTCCTTGCTTTCTCAAAGACTTCCACGCATCATTTCACGAG
AAAGGGTCTTACAAAATGCGAGAAGACCACAGGTACAAGGTTCCCAAGGGTCAAAAGGAGAGAGTTCTTGTTGTTCTTGA
TGATGTTCGCAATCCAATGGACGCCGAAGCTTTTCTTGGAGGATTTGACTGTTTCGGTCCAGGAAGTGTGGTGATCATTA
CATCCCGAGATAAACAAGTTCTTTCCCAGTGTCAAGTCGAGGATATATACACGGTTCCAGGTTTGAACGAGAGAGAGGCT
CTACAGCTCTTCATCAGGTCCGCCTTCCGAGGAAGACAGCCAAGTGAAATTAATCTTGTGGATCTGTCTAAGAAGGTTAT
TGAGGATGCTAATGGGAATCCTAAAGCTCTCTGTCTCTATGGAACGGAGCTGAAAAAGAAGAGAAAAGATCAAATGGAAG
AAGCTTTTCAGAAGATCAAAGGATGTCCACACGTGGAGATTATGGATTTGTTCAAAAGCAGCTACGATGCACTCAGTGAA
ACCGAGAGAAATATATTCCTGGACATTGCTTGTTTCTTTAAAGGAGAACCACGCGACCACGTCATGCGAATACTTGAAGG
GTGTGCTTTCTTTCCACACGTTGGAGTTAACCGTCTCGCCGAGCTGTCTTTATTGACGATATCAGAAACAGAAAGAGTGG
AGATGCACAGTTTGGTTCAAGAAGTTGGCCGCGAAATCGCCAACCGCGAAACAAAACTGATTTCAAGGCGCCGTAGGCTC
TGGGAACCTTCAAGCATCATCAATTTATTACTAGAAGACAAAGAATCCAAGGGAAACGTTATAGAAGGGATTTTTCTTGA
CACAACAAACTTGAACGTTGTTGTTAATCCTATGGCGTTTGAGAATATGTATATTCTGAGGCTGTTGAAGATTTATAGTT
CAAGCCCTGAAGCTGTTCAAGAACTTCATTTGCCTAACAAACTTCACTATCTCCCTTATGAGCTCAGGTTACTTCACTGG
GAAAAGTATCCGTTGAAATCCTTGCCTCAGGAGTTTGATCCTAGCCATCTTGTTGAACTTAATATGCCTTATAGTCGGCT
TAAGAATCTCTGGGGAGGAACCAAGAGTCTAGGGAAGTTGAAAGTAATAATTCTTAGCCACTCTCAGCAACTAGTTGAAG
TTGATGAACTCTCGGAAGCTTGTGGTCTTGAGAAAATCGATCTTCAAGGTTGCAGTAGCTTGAAGAGCATCCCACACACT
GATCAACTAAAGAATCTTCAACTTCTGAACATCTCTGGTTGTACAAGAATCAAACGTACAGAGGTTGAAAAGAAGATAAA
GGGATTGGATCAAGAAGGCGGCTTAAAAGAAACCAAATCTGAATCAATGATGTTCTCCACTTTAGCAATAGTATCGCTTT
GCTCTGTGTTTATCTACCTCTGTTTCTTTTTCTTTTTTTTTTTTTTTGAAGTGAGGACAATCTACTTTTACTTGACGAAA
AAAAAAAACTATTATTAA |
AA seq | Len:726 aa
MATSSSTVQHDVFIAFSSRDTRYSFVSHLSAAFRRSKISFFVGDAQEEAEAVAVTEAAIEGSKVFVVVFSENYAFSRLSL
DTLVKIMERKHNDDVPVVPIFYGDVTSTVVKCQTKRFGEAFSEHRSLYSDQITKWQNCLIETASLSGHESICQPVESELV
KEIVADVREKLIPTGLVGFYSRFVEIENLLWKQSKGYCRLGIWGMPGIGKTTIAQAAFDLLSPDFEVPCFLKDFHASFHE
KGSYKMREDHRYKVPKGQKERVLVVLDDVRNPMDAEAFLGGFDCFGPGSVVIITSRDKQVLSQCQVEDIYTVPGLNEREA
LQLFIRSAFRGRQPSEINLVDLSKKVIEDANGNPKALCLYGTELKKKRKDQMEEAFQKIKGCPHVEIMDLFKSSYDALSE
TERNIFLDIACFFKGEPRDHVMRILEGCAFFPHVGVNRLAELSLLTISETERVEMHSLVQEVGREIANRETKLISRRRRL
WEPSSIINLLLEDKESKGNVIEGIFLDTTNLNVVVNPMAFENMYILRLLKIYSSSPEAVQELHLPNKLHYLPYELRLLHW
EKYPLKSLPQEFDPSHLVELNMPYSRLKNLWGGTKSLGKLKVIILSHSQQLVEVDELSEACGLEKIDLQGCSSLKSIPHT
DQLKNLQLLNISGCTRIKRTEVEKKIKGLDQEGGLKETKSESMMFSTLAIVSLCSVFIYLCFFFFFFFFEVRTIYFYLTK
KKNYY* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0005515 |
Pfam | Leucine Rich Repeat |
KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |
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