Gene Name | BnaC09G0210600ZY |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaC09g18900D [Brassica napus] |
Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
NT seq | Len:2403 nt
ATGGATGCATTCAGAACAGCTGACTCAATCCTCCACCTCATTGACTCGGTCATTCGAAAACGGATTGCGAGCTACAGACT
GGAAAACCCTGCCCTCTCCTCTTCCCTTCTGCAACGATGGCTAGCCACTCCTGCAACTCCTGCTTGCAACAAGGTCAAAA
TCAGCTTCGACAGGTCGGATGAGACAATACGATGCTCCCTCGTTCCCCATCTATCCGCTGCTTTTGGTCGTAAAGGCATT
TCTGTGCTCACAGATAAGCATGATGAATTTTGCAAGTGCATTGCTTCTGTTTTTATTTTCTCTAAGAATTACGTGTCCAT
CAAGGAATCTTTGGATGATTTCTTTAAGACTAGCCAACGGAGACATGACAAAGTCCATGTCGTGGCCACTGTCTTTTATG
GAGTCAATAGATCAGAATTGGAGGGAAACTTCGCCAAGGCGCTCTTTGAGCATCCTACTTCATATCAAGCAAGTCAATTG
CGCAGCGCTGAAGAAATCATAACTCTACCTGGCCACGAAAAAATCAATAAACAAAGTGACTGCGAATTTGTGGAAAAGAT
TGCTACTGATGTTTATGAGAAAATCTTTCCGAAAGAACGAATCGGAATCTACTCAAGGATGCTTCAGGATATAAGTAACT
TGCTATGCAGTCAACAATGGGGAGTCAAAAGCATAGGGTTTTGGGGCATGCCAGGCATAGGAAAGACGGAGCTTGCTAAA
GCAGTCTTTGACCAAATGGCTAGTGACTATGAAGTAACTTGCTTCCTCCAAAACTTTCATGAAACTTTTGAAACAAAGGG
ACTTTACAGTTTGCTGCAGGAACATTTCAAAAACCTTACAAATCAAAACATTCCAAAAAGAGTTCTTCTTGTTCTTGATG
ATGTAAGGAATCATCTATACGCAGAGTCTTTACTTGCTGAGCTTCCCTCGTTTAGTCTTGGAAGCCTGATCATCATAGCC
TCCAGAGATGACCAAGTCCTTTCTCAGTATCAAGTCAATCAAACTTACAAAGTTGAAGGATTAAACAAGCTCGAGGCTAT
GCAGCTATTTTCTTTGTGTGCCTTTGAAAAAGATGTGAAAGAGACTAATCTTCTTAAAGATAATTCTATGAAGGTGATCG
AATACGCTAATGGAAACCCTTTAGCTCTAAGAGTATACGGAAAAGAGATGTCATCACACGAGCAAACAAGTCAAAAGGAG
ACTTTGTTCCTCAAGCTCAAGCAAGATCCTCCCCATCAGATTATGGAAGTAGTCAAGAGTAGCTATTATGCACTAAATGA
TAACGAGAAGAACATACTTGTGTATATTGCGTTTTGCTTCACAGGCAAACATGTTGAAGATGTGTCGAAACTACTACAAG
ACCTTGGTTTCTTCCCAGAGATTGGGATCGACCGGCTTGTGGCCAACTCTCTGGTGACTATTTCAGAAAACAAGTTGGAA
ATGCATAACATGATTCAGGGGGTAGTCAAGAAAATAGGGAGGTGCAGTGAAGACTCCAACACAAGTTTCAAATGTGTATT
GGTAATGTCTTATTCTACCATATTTTTCAACCAATTATCTTCTACATCATCCATAAGCTCTTATGTTATGTTATTTCAGG
GCACTACCGACATCGAAGCCATATCTCTGGATGCATCTAACTTAAACCCGGATGTGGAACTTTCTTTATTCAGATCTATG
TACAACCTTAGATACCTGAGTATTTACTATAGTAATCCTGGAAAACATGGCAAGGCCCTTGAGTCTTTCTCTCTGCCTTA
TGGGCTTAGATTTTTCCATTGGGAGACTTACCCTTTGAAATCTTTACCTCAAGATTTTGATCCAAGCAACCTTGTTGAAC
TCAACATGCCTTACAGTCAACTACAAACTCTTTGGGGAGGAACCAAAAACCTTAAGATGCTGAAGAGGATCAACCTTAGA
CATTCTCGGAAGCTGCTCGAAGTTAATGAACTTTCAGAAGCTCGAAACCTCGAGCAAATTGATCTCTGCGGCTGTAAGAA
CTTGCAGAGTTTCCCATCCATTCGTAATTTGCATAAGCTCAGAGTTGTTGATCTCCCTAGTTGCATAAAGATCAAAAGTT
TCCCTGAGTTCCCATCTAATGTCGAATTAAAATTCGAGGGATCACCCATCAAGACCATGTATCCTCCAGTCCCACTGATC
AGAGTCAAGAGCTTATGCGAGTTCCTAGACAATCCGACAAAACCCTTGAACTTCGAGCGTCATGGTCCCTATATCTTAGA
TATTCTGAGACCAGGAAGCTTCTTGAATAGCCAAAAAAGGATAACAAATCCAGATATGGTGGAAACACCCCCTACATTTA
AAGATATAATGTGTGAAAAAGCAATCTTGATGAGCCAATGGGCGTTGGAAAACCTAAAAAGTTTTCGAAAAGTGGATTTC
TAA |
AA seq | Len:801 aa
MDAFRTADSILHLIDSVIRKRIASYRLENPALSSSLLQRWLATPATPACNKVKISFDRSDETIRCSLVPHLSAAFGRKGI
SVLTDKHDEFCKCIASVFIFSKNYVSIKESLDDFFKTSQRRHDKVHVVATVFYGVNRSELEGNFAKALFEHPTSYQASQL
RSAEEIITLPGHEKINKQSDCEFVEKIATDVYEKIFPKERIGIYSRMLQDISNLLCSQQWGVKSIGFWGMPGIGKTELAK
AVFDQMASDYEVTCFLQNFHETFETKGLYSLLQEHFKNLTNQNIPKRVLLVLDDVRNHLYAESLLAELPSFSLGSLIIIA
SRDDQVLSQYQVNQTYKVEGLNKLEAMQLFSLCAFEKDVKETNLLKDNSMKVIEYANGNPLALRVYGKEMSSHEQTSQKE
TLFLKLKQDPPHQIMEVVKSSYYALNDNEKNILVYIAFCFTGKHVEDVSKLLQDLGFFPEIGIDRLVANSLVTISENKLE
MHNMIQGVVKKIGRCSEDSNTSFKCVLVMSYSTIFFNQLSSTSSISSYVMLFQGTTDIEAISLDASNLNPDVELSLFRSM
YNLRYLSIYYSNPGKHGKALESFSLPYGLRFFHWETYPLKSLPQDFDPSNLVELNMPYSQLQTLWGGTKNLKMLKRINLR
HSRKLLEVNELSEARNLEQIDLCGCKNLQSFPSIRNLHKLRVVDLPSCIKIKSFPEFPSNVELKFEGSPIKTMYPPVPLI
RVKSLCEFLDNPTKPLNFERHGPYILDILRPGSFLNSQKRITNPDMVETPPTFKDIMCEKAILMSQWALENLKSFRKVDF
* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0006952 |
Pfam | Leucine Rich Repeat |
KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |
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