Names & Information
Knowledge of BnaC09G0216200ZY:
| Gene Name | BnaC09G0216200ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g19160D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2 |
| NT seq | Len:1980 nt ATGGAAGTAACATGTTTGGGAGCAGATGAAGCATGGGACTTATTCCGCGAGAAAGTTGGTGAAGTGACCTTAGAAAGTCA CCCTGACATCCCTGCGCTGGCGAGAATAGTTGTTGAAAGATGCAGAGGCTCACCACTGGCAGTTAGCGTTATCGGCGTGG CTATGGCAGGCAAGAGCTTGGTGCAAGAATGGAGGTATGCAGTCGACGCTTTGACTTTATCTGCGGCTAAGTTTTCAGGT ATGGAAGATGAGATCCTTCCGGTTTTGAAGTTTAGCTACGATAGTTTGAAGGATGAGAGAGTGAAACTGTGTTTCCAATA TTGTGCTTTATTCCGTAAGGGTGAACACATATGGAAAGATCATTTGGTAGAGTATTGGGTAGATGAAGGCATTATAGATG GGAAAGAAGATAGATACAGAGCAGAAGAGGAGTGCTACGATATAATAAGATACCTCGTTCGTGCTTGTCTATTGGTTGAG CATCAATATGGCAACGCAGTGACCATGCCTAGCCTGGTTCGTGAGCTGGCCTTGTGGGTAGCATCAAATTTTGGGGAGGA GAAAGAAAACTTTATTGTGAAACCCAATGAAAATCTTGGTGAAGTTCCAAATGTCAAGGACTGGGGACAAGTGAGTAGGA TGTCATTGTCGGAAAATAAGATCAAGAAAATAAGTTGCAGTCCAGTTTGTCCTAAGCTTAGAACCCTGTTACTCGGGTCT AATAACCTGGAGAAGATCTCAAGTGGGTTCTTTATGTGTATGCCTAATCTTGTGGTTTTGGATCTAGCAGCAAACATTGG CCTCAGAGAGCTACCTGATGGGATTTCTAGGCTCATCTCTTTGCAGTATCTCGACTTGTCACATACAGATATAAAGCAAC TGCCTCTAGCAAGTTTAAAAGAGTTGAAAAGGCTTCAACACCTGAACCTTGAGTTTACAGGCTTCCTCAAAGAAATTTCT GGGATATCAAGTTTATCTAACTTGCAAGTTTTGAAGCTCTATGCTTCCTTTGATTTAGATATCAATCTCGTGGAGGAACT ACAGCTTCTGAAGCATTTAAAAGTCTTAACAGTCTCTGGAGGTGATGCCTATGTCTGGGAACAGTTGATGAGTAATCCTA GATTAGCTAGTTGCACTCGCAATATGTATTTTTACAAATGTGAAGCAGGAGAAACTGGCATATCAATTGCAGCGACTTCT AGTAGGCTTGAAGACCTTACAATGCATGAGTCGAACATAAGAGAGATAAAGATTGATCAGAGTAGTCCAAAAACCATGTG CAACTTCCAGTACCTTGTCAAAGTGGAGATAAGTGAATGCCAAGGTCTGCTGGACTTGACGTGGTTGCTCTTTGCTCCGA ATCTTGGTTGGCTAGATGTTAACGAATCACCGCAAATCGAAGAAATAATAAGCAAAGAGAAAGCTGCCAGGTTTATGAAT GGTGAAGCAGATGAGACTATGATGCCCTTTCTCAATTTGAAACACCTTGATTTAGCTTATCTGGACCAACTGAGTAGCAT CTACTGGAGTCCTTTGTCTTTTCCATGCCTAATGAAAATCAGTATTTTCGGCTGTCCGAATCTCTTGAGACTACCTCTTG GTTCCAGCAGCGCCAACGGCTGTAACCTTGTCATTCATGGAGAGGAAGAGTGGATAGAGGAGCTTCAATGGGACGAGGAA GATACTAAGGAACAGTTCACCCTGAAAGGTCGGAAGAGTGAGCCTGTGGCTGCGTATCCACAAAACCAGTCGGAGTTAGA AATGTTGAGGAAGAGAGTAGTGGATCTTGAAGAAGAGAACAGATCAATCAAACAACGGCTTGAGAGGATAGAGAGGTTTT TATGGCAGCAACAGCAACTGCAGCAGGCAAGGGCGCACCAGCAACCAACAACGGGCATGCTTCCACCACAAACTGTAATT CACCAACAGAGGCAATCCCAAAGAACACCTCCAGACATGCCATCAAAATTAGATAAATGA |
| AA seq | Len:660 aa MEVTCLGADEAWDLFREKVGEVTLESHPDIPALARIVVERCRGSPLAVSVIGVAMAGKSLVQEWRYAVDALTLSAAKFSG MEDEILPVLKFSYDSLKDERVKLCFQYCALFRKGEHIWKDHLVEYWVDEGIIDGKEDRYRAEEECYDIIRYLVRACLLVE HQYGNAVTMPSLVRELALWVASNFGEEKENFIVKPNENLGEVPNVKDWGQVSRMSLSENKIKKISCSPVCPKLRTLLLGS NNLEKISSGFFMCMPNLVVLDLAANIGLRELPDGISRLISLQYLDLSHTDIKQLPLASLKELKRLQHLNLEFTGFLKEIS GISSLSNLQVLKLYASFDLDINLVEELQLLKHLKVLTVSGGDAYVWEQLMSNPRLASCTRNMYFYKCEAGETGISIAATS SRLEDLTMHESNIREIKIDQSSPKTMCNFQYLVKVEISECQGLLDLTWLLFAPNLGWLDVNESPQIEEIISKEKAARFMN GEADETMMPFLNLKHLDLAYLDQLSSIYWSPLSFPCLMKISIFGCPNLLRLPLGSSSANGCNLVIHGEEEWIEELQWDEE DTKEQFTLKGRKSEPVAAYPQNQSELEMLRKRVVDLEEENRSIKQRLERIERFLWQQQQLQQARAHQQPTTGMLPPQTVI HQQRQSQRTPPDMPSKLDK* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | probable disease resistance protein At5g63020; K13459 disease resistance protein RPS2 (A) |