Gene Name | BnaC09G0218300ZY |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaC09g19380D [Brassica napus] |
Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
NT seq | Len:1146 nt
ATGGCTTCTTCTTATTCTTCATCCTCTTCTCGCAATTGGTCATATGACGTTTTTCCGAGCTTCAGCGGAGAAGATGTCCG
CAAGACCTTCCTCAGCCACTTTATGAAGGAGCTAGATCGCAAACTTATCATTGCTTTCAAAGACAACGAGATCGAGAGAA
GCCGGTCCCTCGATCCTGAGCTTAGGCAGGCAATCAAGGATTCAAGGATTGCAGTGGTCATTTTCTCCACAAACTACGCC
TCTTCAAGATGGTGTCTTAATGAGTTGCTTGAGATTGTGAGGTGTAAGGAAGAATGTGCTCAGATGGTGATACCGGTTTT
CTACGGTTTGGATCCTTCCCACGTGAGGAAACAGACTGGAGACTTTGGGAAGATCTTTGACAAGACATGCCAAAATAAAA
CAGAGGACGAAATCATTCTATGGAGGGAAGCTTTGACTGATGTAGCTAACATCCTTGGATATCATAGTGTCACCTGGGAC
AACGAAGCAAGGATGATCGACGAAATCGCCAATGATGTTTTGGGTAAATTGAATTCATCTCCATCATATGAGGTTGAGGA
TTTTGTCGGAATTGAAGATCACATCAGAGCTATGAGTTCATTGCTTGACTTGGAATCCGTGGAAGTGAGGATGGTTGGGA
TATGGGGCCCCTCTGGAATTGGCAAGACTACCATTGCAAGAGCTCTATTTAGTCGCCTCTCTCGTCGTTTCCAAAGTAGT
GTTTTCATAGATAAAGTTTTCATATCCAAGAATATGGATGTTTATAGAGGAGCTAATCTAGGAGACTATAACATGAAGCT
GCACTTGCAAAGAGCTTTTCTAGCTGAAGTTTTAGACAATAGGGATATAAAGATAGACCATATAGGTGCTGTGGAAAAGA
TGCTAAGGCACCGAAAAGCTCTTATTTTTATCGATGGTTTGGATGATCAGGATGTGCTAGATGCCTTAGCTGGAAGAACC
CAATGGTTTGGAAGTGGCAGTAGAATCATTGTGGTTACAAAAGATAAACATATTTTAAGGGCCCATGGGATTGATAACAT
TTACGAGGTCTGTCTCCCTTCTAAAGACCTTGCTCTTGAGATATTTTGTCGATCTGCTTTCAGAAGGAATTCTCCACCTG
ATGGTTTTATGGAGCTTGCTTCTTAA |
AA seq | Len:382 aa
MASSYSSSSSRNWSYDVFPSFSGEDVRKTFLSHFMKELDRKLIIAFKDNEIERSRSLDPELRQAIKDSRIAVVIFSTNYA
SSRWCLNELLEIVRCKEECAQMVIPVFYGLDPSHVRKQTGDFGKIFDKTCQNKTEDEIILWREALTDVANILGYHSVTWD
NEARMIDEIANDVLGKLNSSPSYEVEDFVGIEDHIRAMSSLLDLESVEVRMVGIWGPSGIGKTTIARALFSRLSRRFQSS
VFIDKVFISKNMDVYRGANLGDYNMKLHLQRAFLAEVLDNRDIKIDHIGAVEKMLRHRKALIFIDGLDDQDVLDALAGRT
QWFGSGSRIIVVTKDKHILRAHGIDNIYEVCLPSKDLALEIFCRSAFRRNSPPDGFMELAS* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0000166 |
Pfam | NB-ARC domain |
KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |
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