Names & Information
Knowledge of BnaC09G0218600ZY:
| Gene Name | BnaC09G0218600ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g19410D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:3393 nt ATGGATTATCGTAATTGGCTATACGATGTTTTCCCGAGCTTTAGTGGGGAAGATGTGCGCATAAATTTCCTTAGCCATTT TCTCAAGGAGCTAGATCGAAAACTGATCAAGGCTTTCAAAGACAATGAGATCGAGAGAAGCCACTCGATTGCCCCTGCGC TTGTAACCGCGATTAGGACTTCCAGGATCGCGGTCGTTGTGTTCTCGCCAAAGTATGCCTCTTCCAGTTGGTGTCTGGAC GAGTTGGTTGAGATCGTGAGATGTATGGAAGAGTTGGGTCAACTAGTTCTGCCCATTTTCTATGGTTTAGATCCATCTCA TGTCAGGAAACAAACGGGAAAGTTTGGAGAGGGTTTTGCCAAGACTTGTAAGATGAAAACAAAAGCAGTGAAAATCAGAT GGCAGCAGGCGTTGACCGTTGTCGCGAATCTACTCGGATATCATTCCCAAAATTTCAATAACGAAGCAAAAATGATTGAA GTAATCGTCAATGACCTTTTGGGCAAACTGAATTATACTTCATCAAAAGATTTTGAGGAATGTGTTGGCATTGAAGATCA TATTGCTGAGATGAGCTTGCTGTTGGATATGGAATCTGAGGAAGTAAGGATGATTGGGATATGGGGCCCATCGGGAATTG GCAAGACTACCATTGCAAGAGCTCTATTTAGTAGACTCTCTCGTCGGTTCCAGTGCAGTGTTTTCATTGACAGGAGATTC ATATCTAAGATTATGGAAGGTTATAGGGGAGCCAACCCTGATGACTATAACATGAAGTTGAGTTTGCAAAGACATTTTCT GTCTGAAATTTTAGGCACAAGGCACACACAGATAGATCACTTAGGTGCGGTGGAAAATAGACTAAAAAACCAGAAAGTCC TTATCTCTATCGATGATTTGGATGATCAAGTGGTGCTAGATGTATTGGCAGGTCAAGCTCATTGGTTCGGAAGTGGAAGC AGAATAATTGTGGTTACAAAAGATAGGCATTTTTTAAGGGCTCATGGGATTGATCATATTTACGAGGTCTGTCTCCCATC TGAAGAGCGTGCTCTGGAGATACTTTGTCGATCTGCTTTCAGGCAAAACTCTCCACGTGAAGGATTTGAGAAGCTTGCAG TTGAAGTTACAAGACATGCCGGTAGTCTTCCTTTGGGTCTTACTGTTTTAGGTTCCACTTTGCGGGGGAGGGACAAGGCG TATTGGATGGATATTCTGCCAACGCTTCAAAGCGGTGTTGATGAGAAAATAGAGAAAACCCTAAGAATTAGCTATGATGG GTTGGATAGAGAAGAAGATAAAGTGATATATCGTCACATTGCATGTCTTTTCAATGGTGAAAAAATCCCTGACATTAAGT TGTTGCTGGAAGATAGGAACCTGGGTGTAATTGTTGGGATCCAAAACCTAGTTGATAAGTCTCTCATACACGTAAGAAGC GATACCGTGGAGATGCACAGTTTGTTGCAAGAAATAGGTAGAAAAATTGTTCGTGCACAGTCCATTGACGAGCCTGGAAA CCGAGAATTTCTGGTGGATTTGGATGATATATGCGATGTACTTGGTGAAAACAGTGGTACTAAGAAAGTTTTAGGTGTAG CACTGGATATGGACAAGATTCATGATGAGTTACATGTCCATGAAAATGCCTTCAAAAGGATGAGTAATCTCCGTTTCCTT AAATTTTACACGTTTGGAAAAGAAGCCAGATTGCGGTTAAACGAAAGCTTTGACTATTTGCCCTCAAAACTCAAGATTAT TGTGTTGGGACAAATATCCAATGAGATCAATCTTGAAAACTTGTGGGAAGGCGTCTCGCCGCTTGGACGTCTTAAGAAAA TGGATTTGTGGGGATCTAAGAACTTGAAAGAAATTCCCGATCTTTCGAAAGCCACCAGTCTAGAGAAATTAGATCTCAAG GGCTGTTCTAGTTTGGTGGAGCTCCCTTCCTCTATTAGCAAACTCAATAAACTGACTGAGTTAAACATGCCAGCATGTAC AAATCTAGAGACTCTTCCGACTGGAATGAACCTTGAATCTCTCAACCGCCTCAATCTCAAAGGATGCACACGCTTGAGAA CTTTTCCAAATCTCTCAAGAAACATCTCAGAGCTTATTCTAGACGAAACATCCATTACCGAATTCCCTTCAAATTTGTAT CTCGAGCATCTTAATTTGTTTTCCATGGAAGGTATAAAGAGTGAGAAGCTATGGGAAAGAGCACAGCCGCTTACACCTCT CATGACCATGTTATCTCCTTCTTTGAGAATCTTGTCTCTCTCGGATATCCTAAGTTTAGTGGAGCTTCCTTCTTCATTTC ATAATCTCCATAAACTTACAAATTTGAGCATTACAAGATGCAAAAACCTAGAGATTCTTCCCACGGGAATCAACCTTCCA TCGCTCATTCGCCTTATTCTTAGTGGGTGCTCGCGGTTGAGGAGTTTTCCTGATATCTCAAGAAATGTCTTAGATCTCAA TCTAAGCCAAACAGGAATAGAAGAGATTCCTTTGTGGGTTGAGGACTTCTCTAGGCTCAAATACCTATTTATGGAAAGTT GCCCTAAGTTAAAATATGTATCCATTTCTACACTGAGACATCTTGAGATGGTTGACTTTTCAAACTGTGGGGCATTGACT GGAGCTGGTATGATTGGTTATCAAAGTGGAGAGGCAATGAGACCAGATGATATTGAAACAGAGGTACTAGTCCCCGAGGA GGCCTCTTCTTCTTTTCAAGATAATTTTGTCCCAAGAGTCAAATTCAGACTCATCAACTGCTTTGACTTGAATCTTGAAG CTCTTCTTCAGCAACAATCAGTTTTTGAGCAACTCATCTTGTCTTGTGAAGAAGTGCCTTCATATTTCACTCATAAAGCT GCAGGAGCATCCACATCTCTGACCGTCCCTCTGCTTCAAACCTCCCTCTCTCGACAAATCTTCGGACTTCGAGCTTGCGC TGTTGTTGTTTTTGACCCTATACCAACCCTTGGTTCCGTTTGCGTGTATATCAAGGTAAGTTGTAGGTTCAAAGACGAAC ACGGAAACTACTTTGATTCTGCTTATCATCAAGAAAACATCACGGCTTATAAGAAGGGTAGCCATATGTTTATATTCGAC TATTGTTTCCCTCTAAACGAAGACAATGCTCATCTAGCTAAACTTAGCTGCGATCACGTGGATATACAGTTTCATTTCCC TTCGAATGTTCCCTGCAAACTGATAGAATGGGGTATACGACTGATAGAGGATTTTTCATCACCGGAGAACCAACTATTTA GTCCATCCACTGATGAACACAATGTGGCTGATGAGACTGACCACGGTGAAGAGTGTGAAGTCCAGGGCTGTTTTTCATTT CTGAATCTGTTTTTTGCTATTTGTCAATGGTGA |
| AA seq | Len:1131 aa MDYRNWLYDVFPSFSGEDVRINFLSHFLKELDRKLIKAFKDNEIERSHSIAPALVTAIRTSRIAVVVFSPKYASSSWCLD ELVEIVRCMEELGQLVLPIFYGLDPSHVRKQTGKFGEGFAKTCKMKTKAVKIRWQQALTVVANLLGYHSQNFNNEAKMIE VIVNDLLGKLNYTSSKDFEECVGIEDHIAEMSLLLDMESEEVRMIGIWGPSGIGKTTIARALFSRLSRRFQCSVFIDRRF ISKIMEGYRGANPDDYNMKLSLQRHFLSEILGTRHTQIDHLGAVENRLKNQKVLISIDDLDDQVVLDVLAGQAHWFGSGS RIIVVTKDRHFLRAHGIDHIYEVCLPSEERALEILCRSAFRQNSPREGFEKLAVEVTRHAGSLPLGLTVLGSTLRGRDKA YWMDILPTLQSGVDEKIEKTLRISYDGLDREEDKVIYRHIACLFNGEKIPDIKLLLEDRNLGVIVGIQNLVDKSLIHVRS DTVEMHSLLQEIGRKIVRAQSIDEPGNREFLVDLDDICDVLGENSGTKKVLGVALDMDKIHDELHVHENAFKRMSNLRFL KFYTFGKEARLRLNESFDYLPSKLKIIVLGQISNEINLENLWEGVSPLGRLKKMDLWGSKNLKEIPDLSKATSLEKLDLK GCSSLVELPSSISKLNKLTELNMPACTNLETLPTGMNLESLNRLNLKGCTRLRTFPNLSRNISELILDETSITEFPSNLY LEHLNLFSMEGIKSEKLWERAQPLTPLMTMLSPSLRILSLSDILSLVELPSSFHNLHKLTNLSITRCKNLEILPTGINLP SLIRLILSGCSRLRSFPDISRNVLDLNLSQTGIEEIPLWVEDFSRLKYLFMESCPKLKYVSISTLRHLEMVDFSNCGALT GAGMIGYQSGEAMRPDDIETEVLVPEEASSSFQDNFVPRVKFRLINCFDLNLEALLQQQSVFEQLILSCEEVPSYFTHKA AGASTSLTVPLLQTSLSRQIFGLRACAVVVFDPIPTLGSVCVYIKVSCRFKDEHGNYFDSAYHQENITAYKKGSHMFIFD YCFPLNEDNAHLAKLSCDHVDIQFHFPSNVPCKLIEWGIRLIEDFSSPENQLFSPSTDEHNVADETDHGEECEVQGCFSF LNLFFAICQW* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |