Names & Information
Knowledge of BnaC09G0231200ZS:
| Gene Name | BnaC09G0231200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g19010D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:2904 nt ATGGCAACGTCGACTTCGTCAAACCCAGTACACCAGCCGCCACAACACAAAGTGTTTTTAAATTTCCGGGGAGCTGATCT ACGCCTTAATTTCATAAGCCATCTAGTAGGTGCCCTTCAAATGGAAGGAATCAACTATTTCATAGACGAAGATGAGATGA GGGGAGAAAAGCTAGAGAAACTCTTCAAGACGATTGAGGAGTCGAGCATCGCGATTGTTGTTATTTCAAGTAAGTACACG GAGTCAGAATGGTGCTTGAACGAGCTGGCGAAGATTAAAGAGTGTGTGGAGGAAGAGAGAATGAGGGTATTCCCGGTGTT CTACAAAGTGACAGTCGCTAGCGTGAAGGACAAAAAAGGAAACTTTAGGGATTATTTGACAAAACTTAGTTCTGATAGAA AAGAAACATGGGAGAACGCTCTCGACTTTGTGACCTCGAGGTTAGGCCAGACAGTGGACGAAAAGAGTTGCGAGGGAACT GCGATTAAAGCAATCGTAAAGGCAGTAATGAGACTGCTAGATGACATTTCAACAAAGCGAGCAGATGGTCGAGGAGGGAC ACAGAAGAAATTGCTGACAGAAAAAGGAGCAGAAGACAGGACTTGTTCAGACACATCTTCTTTGTATGGAATGGAGACAC GCACAAAGCAATTGGAAGATAAGTTAGAACTTCAACCGAAAGTCACTCGCATTGTTGGTGTTGTTGGGATGCCAGGTATA GGTAAGACCACTCTTGCCAAGAAAGTTTTAGAGAAGCAGAGACAGAGATGCAAATTCATGTACACGGTGTATCTGGGTGA GATCTGCAAGAAATCAAAGTTGCTTCCCCTCAACAGACTGCATGAAGACCTCCTCCTTGAATTATATAATTGGAAAAACA ATGGGAATGAGAAACAACAGATGAATTCCAATTTCTCACTAGACAAATTTAAGGCTGGCTTAAGCAAGAAAAAAATATTT GTTGTTCTTGACGATGTGAGTGACAAGAAGCAGTTAGATGCGATTCTTGAGAATAGGGAGTGGATATGCGAAGGAAGCAA AATTGTCATTATAACAAGGAGCGAATCCGCTGTAAAGGGAATAGTCAATGATACTTTTTTCGTCCCGGGGCTGAGCCACA TTGATGCGTTAAAGCTCTTCAACTACCACGCATTTTCTAGTGCAGACTATTGCGGCGACCCAGGTCTTAGGAAGCTTGCA GAAGAGTTTGTGGATTACACACGAGGACATCCATTAGCTCTCAAGGTACTTGGGGGTGAGCTTCATCTGAAGGATAAGGC ATACTGGGAATCAAAGCGAGCAATGTTGACTCAAGGCCTGAGCAACATAATTCAAGATGGCTTGAGAGTACCTTATGACG ACCTTAGCGAGCACCACAAGAACGTGTTCCTCGACATCGCCTGTTTCTTTAGGTTCGGTGATGAGAATCATGTGAAGAGT TTGTTGGATTCTTCGCTACATGATGATGATATTAAAGTTCTCGCAGATAAGTTCTTGATCAACATTTGTGCTGGTCGACT GGAGATGAATGATATGTTTTATACTTTAGCGATGGGACTCCTTTCACAAGCATCCGCTGAAAACACAAAAAGCGGTTGTA GGCTCTTCAACCATGGGGATATTGTTGGTGTCCTAAATACCAAAGCGCAAGCAACCAAGGTCAGAGGAATATTCTTCGAT GTGTCTCAAGTCACGAAGAACGTGATGTTAGATAGTGACACATTTGCAAGCATGGGTGATCTCAGATACTTGAAATTCTA CAATTCTCGTTGCCCTAAAGTATGTGAATCTGAATGCACAGTCAACTTCCCTGACGGAGTTGAGTTCACATTGCAAGAGA TTCGGTATCTCCACTGGCTGAAATTTCCATCCGAGAAGTTTCCACAAGAATTTGACCCCAGGAATCTTATAGACCTCAAG CTGCCATACAGCAAGATGGAGCAGATTTGGGACGGAGACAAGGATGCATCAAAACTAAAGTGGTTGGATATGAATAACTC GTGTAAGCTGCGCACATTGACTGGTTTATCGCAGGCTCGAAACCTTCAAACTTTAAACCTTGAAGGCTGCACAGAACTGA AGGCGGTTCACGAAGAGGTTCAGAACATGGATAGTCTCGTATTCCTGAACCTGAGAGGATGCACGAGTCTCGAGTCTCTT CCAGAGATGAACTTAATCGCTCTGAAAACTCTTATCCTTAGCGGCTGCTCAAGGTTTGAGGAGTTCCATATTGTTGGAAA GAATCTGGAAGAACTCTACCTAGATGGTACAGTGATAAAAGGACTTCCTTCAACGATAGGGGACCTCCAAAGTCTAGTCT TGCTGAAACTGAATGACTGCGTACACCTTTCAAGCCTCCCCGATACAGTCGGAAACCTAAAAGCACTTGAAAAGCTGATA CTTTCTGGTTGTTCAAAGCTTGAGACATTACCAAAGTTTCAAACAGCGTTGAAGACTTTACTATTCGACCGAACAGGCAT ATATTTCCCCCAGCAACTGCCATGTGGAAGCTTCTTGTTATCATCTGTGCGACATTTATGCCTGAGTAGAAACATTTTCA AAAGCTTGCCGAGCGAAATCAGTTTGCTATATCATCTCAAGTGGCTTAACTTGAAGTATTGCAAAGAACTTAGTTCTGTA CCAGTGCTTCCACCAAATCTTGAATTGTTAGATGCACACGGCTGCATTTCACTTGAAAAGGTGGCGGACCCATCGCCTCT TTGGTTAGGGGAAACTAAGCATGTACATTCCACGTTTAACTTCAGTAACTGTAACAAACTTGATCAAGTTGCAGAGAATA GTATTGAAACCTACGTTCGGAGGAAAATTCAGTTGATGTCAAATGCAGTGGCCCTATACGACGAGGTAATATTCCCTTAT TTTCTAGAATATGATGAATTCTAA |
| AA seq | Len:968 aa MATSTSSNPVHQPPQHKVFLNFRGADLRLNFISHLVGALQMEGINYFIDEDEMRGEKLEKLFKTIEESSIAIVVISSKYT ESEWCLNELAKIKECVEEERMRVFPVFYKVTVASVKDKKGNFRDYLTKLSSDRKETWENALDFVTSRLGQTVDEKSCEGT AIKAIVKAVMRLLDDISTKRADGRGGTQKKLLTEKGAEDRTCSDTSSLYGMETRTKQLEDKLELQPKVTRIVGVVGMPGI GKTTLAKKVLEKQRQRCKFMYTVYLGEICKKSKLLPLNRLHEDLLLELYNWKNNGNEKQQMNSNFSLDKFKAGLSKKKIF VVLDDVSDKKQLDAILENREWICEGSKIVIITRSESAVKGIVNDTFFVPGLSHIDALKLFNYHAFSSADYCGDPGLRKLA EEFVDYTRGHPLALKVLGGELHLKDKAYWESKRAMLTQGLSNIIQDGLRVPYDDLSEHHKNVFLDIACFFRFGDENHVKS LLDSSLHDDDIKVLADKFLINICAGRLEMNDMFYTLAMGLLSQASAENTKSGCRLFNHGDIVGVLNTKAQATKVRGIFFD VSQVTKNVMLDSDTFASMGDLRYLKFYNSRCPKVCESECTVNFPDGVEFTLQEIRYLHWLKFPSEKFPQEFDPRNLIDLK LPYSKMEQIWDGDKDASKLKWLDMNNSCKLRTLTGLSQARNLQTLNLEGCTELKAVHEEVQNMDSLVFLNLRGCTSLESL PEMNLIALKTLILSGCSRFEEFHIVGKNLEELYLDGTVIKGLPSTIGDLQSLVLLKLNDCVHLSSLPDTVGNLKALEKLI LSGCSKLETLPKFQTALKTLLFDRTGIYFPQQLPCGSFLLSSVRHLCLSRNIFKSLPSEISLLYHLKWLNLKYCKELSSV PVLPPNLELLDAHGCISLEKVADPSPLWLGETKHVHSTFNFSNCNKLDQVAENSIETYVRRKIQLMSNAVALYDEVIFPY FLEYDEF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |