Names & Information
Knowledge of BnaC09G0231600ZS:
| Gene Name | BnaC09G0231600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: uncharacterized protein LOC103839134 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:6627 nt ATGACCGATTGTGAAAAAGCCGAGCGATTCGTCTACATGAGCTGTGTAGACGAGGTACGCTACTCTTTTGTCAGCCACCT CTTCGACGCTCTCCGGCGGAATGGCATATCATCTGTATTCGTCGATTCCGGAGATCTGCTCTCCGATGAAGCGCAGGAAA AGGTAGAGAGAGCTAGGGTTTCTGTGGTGGTTTTACCCGCAAATCGTCAGGTATGCCTTGAAAAGCTTGAGAAGGTTCTC AATTGCCAGAGGAACAAGGAACAGGTGGTGATTCCAGTGTTGTACGGAGACAGTATATTACATGGAGAATGGCTAAGCGC GATGAATTTGAGGGGCTTATCACCAGTCTTTCAGTCTAGGAACGATTGCAGTGACTCTAAACTTGTAGAAAAGATTGTCA GAAATGTGAATGAGAAGCTCTTATATATGGGAAGAATTGGAATGTCCTGGAAGCTACGGGAGATAGAAAACATGGTTAAC AAGCAACCGTTGGGCATCCGCGGTGTTGGCATCTGGGGTATGCCTGGCATAGGCAAGACAGAACTTGCTAAAGCAGTCTT TGATCAAGTTTCTGGAGGATTTGATGCTTGCTGTTTTATCGAAGACTATGATAAAGCTTTTCATGAGAACAGACTTTTTC GTATTTTGGTGGAACAACTTATGAAAGACCAGCCTGCAAATAGTGGTTCCATTACAAAAAAGAGATTGCGTAGAGACAAA TTAATGAATAAGAGAGTTCTTGTTGTTCTTGATGACGTTCGCAATCCTCTGCTTGCAGAGTCCTTTCTCGAATATTTTGA ATGGTTCGGTCCCGAAAGCCTGATCATCATAACCTCCAGAGACAAACAAGTGTTTCGTCTTTGCCGAATCAATCAAATAT ATGAGGTTCAGGGTTTAACTGAAAAAGAGGCTTTACAACTCTTCTTGCTGTGTGCATCTCTTAACGATATGGGAGAGCAG AGTCTCCACGAGGTGGCAATGGAAGTTATTAAATATGCCCATGGAAACCCGTTAGCTCTAAGCATTTATGGCGGAGCGCT GAAGGGCAAGGAAACACCAAAAGATATGGAGACTGCATTCCTCGAACTCAAGGATCGTCCTCCATGTAAGCTTGTCGATG CAATCAAGAGAACCTACGACACTCTCAATGACAGCGAAAAGAACATTTTTCTAGACATAGCTTGTTTCTTCCAGGGAGAA AATGTTGACTACGTGATGCAACTGCTTGAGGGTTGTGGTTTTTCTCCGCATGTTGGAATCGATTCTCTTATTGAAAAGTG TTTGGTGGCTATTACAGAAAACCGAGTCCGAATGTGTAATTTTACCCAGGATGTTGGCAGATACATGATAACAAAAGGAG CAACTGTACAGATCGAGAAACGCAGCAGACTGTGGGAACCTCAGAGCATCAAAGATTTATTAGAAGATACTGAAGACACA GAAAATGGAGAACCCAACGTAACTGTCAAATTTGCCCAGGACACTCAAGAGTTGGAAGCCATATTTCTGGACACATCAAA CTTAAGTTTTGATATCAAACCTGCTGCCTTTGAGAATATGTTAAACCTTAGGTTGCTGAAGATTTACTGTTCGAATCCTG AAACTCATCCTGTAATCAGTTTCACCAGAGGCTTTCTTCATTCTCTTCCTGGTGAGCTAAGGCTCTTTCATTGGGAGAAC TATCCTCTGCAATCTTTTCCTCAAAAATTTGATCCTCGGAACCTTGTTGAAATCAACATGCCATACAGTCAACTTAAGAA ACTTTGGGGTGGAACCAAGAACCTGGAGACGCTAAAAACGATTAGGCTTTGTCATTCCAGGCAGCTGGTTGATATTGATG ATATTCTAAAAGCTCCAAGTCTTGAGAGAATTGATCTCCAAGGCTGTACAAATCTTCAGATTTTCCCACCGTCAGGTCAA TTGCTGCATCTCCGAGTTGTAAATCTCTCAGGCTGCGCAGAGATCAAAAACTTCCCAGACGTTCCACCAAATATTGAGAA ATTGCATCTCCAAGGTACAAGCATAAGAAGTTTACCACCTTCCCTTGTTAAGCCGAATCGCGGGGAGCTTGTCAACCTTC TAGCAGAACTTTCGGGTCTTTCAGATGCTTTAAAACTTGAGCGTTTATCGAGTCTGGAGAAATCTAGCTCATCTAGCACA GATGTTGGCAAGCTTAGTTGCTTGGAGCTGAAAAACTGTTCTAGTTTGCAGAGTCTGCCAAACATGTTTCATTTAGAATT TCTCAAAGTTCTTGATCTCTCTGGCTGCTCAGAGCTCGAGATTATTCAGGGTTTCCCTCAGAACTTGAAGGAGTTATATC TTACTGGCACTGCTGTGAGAGAAGTGCCACAACTTCCTCAAAGCCTAGAACTCTTAAATGCATATGGTTGTGCCTCTCTG GAATCAATTCGATTGGACTCCACTCAACTTCCTATGCATTACTCGTTCAGTAATTGTTTTAAACTATCTCCGCAAGTGGT CAACCAATTTTTGGTGAAAGCGCTGGCTAACGCAAAACACATACCAAGAGAGCATCCTCAGGAATTTGACAAAGATCTGG CTTTCAGCTTCTGTGCGCCCACACATCCAGATCAGGATTCCACGATTGATCTGCAACCAGGATCTTCCGTAATGATATGG CTAACTCCTTCTTGGAGGAGCGCGCTTGTAGGCTTTGTTATGCAAGTGGAGGTTGCATTTTCGAAGGATTACTATCCTGC TACTGGGTTTGGCATTAAGTGTATTTGCAGATGGAAAAACAAGGAAGGCGGCTCTCATAGGATAGAAAAAAATTTGCATT GTTGGGCTCCTGGGAAAGCTGTTCTACAGGATCATATGCTTGTCTTTTGTGATGTTAAAATGCGTCCAAGAACAGATGAA GGAAATGACCCCTATATCTTGGCTGATTTAGTTGTATTTGAGTTCTATCCTGTCGACAACCAGTCAATCCGTCTAGATTA CAGTTTCACAGTGGAAAGATGTGGAGTCTATGTAATAACTGCTGCAACTGGCAACACAAGTCTTGAGAGTATTTCACCAG TATTGTCCTTGGATCCAGTGGAGCTTTCTGATGATGAAACTAAAGATGGAGCCAGCTATGATCCAACTGGCAATGCAAGT CTTGAGAATATTTCATCAGCTTTGACCTTCGATTCGATGGATATTTCTTGCAATCCGAGTGAAGAACTGATAAAAGCTAG CTATGATGATTTACAGGAGATAGATAGAGCCTTATTTCGTTGCGTAGCGTATTTATTCAATGATGAGGATATTCATTTGG TGAAAGTGGAACCCCTTGTTGCTTGCATCGACTTGAATGTTAGTTCTAGGCTCAAGGTCCTAGCCAAAAAGCATCTCCTA CGTGTATCTTCCAATGGGGTAATCAGGATGCTACCAATGGGTAAAGAAATCCTCCATAGAGTAAGCATTGGTTGCTCGGA AGAAGACTCTGAAAAGATTTCTGTGGCTTCGTCAGGCTGTTGGAAGTATGATGTTTTCTTGAGCTTCAGCAGTCAAGATG TCCGCAAAAGCTTCCTCAGTCACCTTCTTAAAGCATTCATCAGCAAAGGAATCACTATGTTCATAGACAATGAGATATTC AGACGCCAGGCGATCAGCCCCGAGGTTTTACAAGCAATAAGAGAGTCGAGTATCTTGATTGTTGTGTTCTCAAGAGACTA CGCTTCTTCAAGCTGGCTTTTGGGTGAGTTGGCGGAGATTGCAAAGAGCAGGAAAGAGTTGAGCCAAATAGTGATACCGG TTTTCTACTATGTGGATCCTTGGCACGTTAAGACACAAGCAGGAGATTTTGGAAGGCAATTTGGACAAACTTGCAAGAAA CAAACAGAGGATGAGAAACAACGATGGTGCCAAGCTTTGACCAACATAGCAGACATACTTGGAATCAGTTTTAAGAATTG GGATAACGAAGCAGACATGGCTGAGACAATTGCCAATGATGTTTCAAGTAAACTGAATATTACAGAATCAGAGGGTTTTG GTGAGTTTGTCAGAATTGAAAATCATGTCTCAAAATTGAATATATTGTTGTCCTTGGAATCTGAGGAAGTGAGGATGGTT GGCATTTGGGGTCCTTCAGGAATTGGTAAGACTGACATTGCAAGAGCACTATATAGCCGACTTGCTCATAGATTCCAGCG TACCATATTTGTGGATATGTCTTTCGTATATAGGAGACCGGATTACTACGGCGCAAAAGTGGATTTCCAAACTCAGTTTC TATCTGAAGTTTTAGGCCGGGAGTACTTTAAGGTAGGTATGGATCATCTATGTATGGTGAGAGACATGCTAAAGGAACAG AGAGTTCTTATCATTCTGGATGACGTGGATGATCAAGTTCGACTACTAGATGTCTTGGTAGAACAAACAGAATGGTTTGG TTCAGGGAGCAGAATTGTTGTTATTACACAGGACATAGGTCTTTTGAAATCTTATGGGATTGACAAAATTTATTATGTGG ATTTACCATCTCAAAAAGAAGCTCTTCAGATGTTCTGCCAATCTGCTTTCAGGCAAAACTATCCACCCGATGGTTTTATG GAAATCGCAGTTGAGGTTGCAGAAGCTGTCGGTAATCTTCCTTTGGGTCTCATAGTCTTGGGTTCGTATCTAAGAGGGAG GGAAATAACAGAATGGGTAGATATATTGACTCAGATCAAGGATAGTCTGGATGGGAAAATGGAGATGATATTAAGAGTCG CATATGACAGTTTAAGTGATCATGATGATAAAATCATATATCTTCACATTGCGTGTTTATTTAATTATGACACAGTCGAA TATGTGACATGTTTACTTTCAGACAGCCACTTGAGTGTTGTGTGCAGGCTTAAAAGCCTAGCTGAGAAGTCTTTCATACA CATAACGGAAAATGGATACATTACAATGCACCATTTGCAACAAAACTTTGGCAGAGAAATAGTCCGTAATGAGTCCATTT ATAGTCCCGGAAAACGTCAATTCTTGGTGGATTCCGAGGATATTCTTGATGTATTTCAGGATAACACCGGTACTGAAAGT GTTTTAGGGATATCATTAGACATATCAGAACTCGATCGTGAGCTATATATAAGCGAGAGAGGGTTCAGCGGGATGACAAA TCTCCGGTTCTTGAAATTCTACACAAACTTGGGGAATAAAGAAGTCAATGTGCACTTACCTCATGGCCTTGATTATCTGT GCCCGAAACTCAGATTATTGCACTGGGAGGCATTCCCAATGAGATGCATGCCTTCACACTTCTTTCCAGAAAATCTTGTT GTACTCGCAATGGAGGCTAGCAAGCTTGAGAAGTTGTGGAATGAAGCTCAGCCGCTTAGAAGTCTGAAGTGCATGAGTCT ACGGTGTTCTTTAAATCTGAGAGAAATCCCAGATCTTTCACACGCCACCAGTCTTGAGAAATTGGATCTTCGCGGTTGCT CAAGTTTGACTGAGCTTCCTTCCTCTATTTGGAATCTCCATAAATTGAAGGACTTGGACATGGGATATTGTACACATCTC ATGACTCTTCCAACCGGTATCAACTTGGAATCTCTCCATTGCCTTAATCTCAGTGGATGCTCACGTTTGACAGATTTTCC AGAAATTTCAAGAAGCATTTCAGATCTCTATCTTGATGGAACTGCGATAGAGGAAGTTCCTTGGTGGATCGAGAACATAT CTAGGCTATCACACCTATCCATGAATGGTTGCAACAAGTTGAATAAGATCTCCCCAAACATATCTAAACTGAAATTTCTT GTGGAGGTAGACTTTTCAAATTGCGAGTCACTGACTGAAGATAGCTGGCAGAACCATCCTGAGGAGATCTCCACTTCTGT CACGACTGTAAACATGTCTGGTAACAGTTTCCAGAGACTTCCAGACACTTGGACGTCCATTCAACCAGAGGATCTTATCT TCCATAGTTGCAGAAATCTCGTGTCACTGCCAACGCTCCCTACATCTCTTTTCAGGCTAACGGCAAATAATTGCGAATCT CTTGAGAGTTTGCATGGGTCCTTTAGCTATCCACAGGCGGCCTTCCAGTTTATCAACTGCTTCAAACTGAATCATCATGC TAGAGAACTCATCCTACAGTCAGATTGCGCGTATGCTATCTTACCTGGTGAAGAACTTCCTGCACATTTCACTCATCGAG CTGCGGGCAGTGTCCTAACCATTTATTTACCTCGGAGCTCTCTTTCCAAAAGGTTCCCAAGTTTTAAGGCTTGCATCATG ATTGAATCTAGATCTGGTTCGTTTCACTTTGGCCTAGTTTGGCCCTTCAAAGGTGGAAGCGACAAAATATACTATAGTTG TTGTTTGACCAACACTCCCTCTACAAGAAACCATCTAATCGTATTCCACTGTGAGTTTTCTTCCGATGATGTCAATGATT CCCGAGCTGAGCTGAACTATAGCGATGTGCAGTTTGAGTTTGATTGCCTTGACGACAAGAAGGAAATGATACAGATAAAA GAATGTGGTATACAGCTCTTGGAAGTCTCTCCATCTGCGGACGAGAGTGGTAAAATCTTTAAACCTGAATCTGGCTACGA CTCTGAAGAGAGTGATGTAGAAGACATTGGAAGCTGCAAAAGAATACGTGTACGAATTGATGATTAA |
| AA seq | Len:2209 aa MTDCEKAERFVYMSCVDEVRYSFVSHLFDALRRNGISSVFVDSGDLLSDEAQEKVERARVSVVVLPANRQVCLEKLEKVL NCQRNKEQVVIPVLYGDSILHGEWLSAMNLRGLSPVFQSRNDCSDSKLVEKIVRNVNEKLLYMGRIGMSWKLREIENMVN KQPLGIRGVGIWGMPGIGKTELAKAVFDQVSGGFDACCFIEDYDKAFHENRLFRILVEQLMKDQPANSGSITKKRLRRDK LMNKRVLVVLDDVRNPLLAESFLEYFEWFGPESLIIITSRDKQVFRLCRINQIYEVQGLTEKEALQLFLLCASLNDMGEQ SLHEVAMEVIKYAHGNPLALSIYGGALKGKETPKDMETAFLELKDRPPCKLVDAIKRTYDTLNDSEKNIFLDIACFFQGE NVDYVMQLLEGCGFSPHVGIDSLIEKCLVAITENRVRMCNFTQDVGRYMITKGATVQIEKRSRLWEPQSIKDLLEDTEDT ENGEPNVTVKFAQDTQELEAIFLDTSNLSFDIKPAAFENMLNLRLLKIYCSNPETHPVISFTRGFLHSLPGELRLFHWEN YPLQSFPQKFDPRNLVEINMPYSQLKKLWGGTKNLETLKTIRLCHSRQLVDIDDILKAPSLERIDLQGCTNLQIFPPSGQ LLHLRVVNLSGCAEIKNFPDVPPNIEKLHLQGTSIRSLPPSLVKPNRGELVNLLAELSGLSDALKLERLSSLEKSSSSST DVGKLSCLELKNCSSLQSLPNMFHLEFLKVLDLSGCSELEIIQGFPQNLKELYLTGTAVREVPQLPQSLELLNAYGCASL ESIRLDSTQLPMHYSFSNCFKLSPQVVNQFLVKALANAKHIPREHPQEFDKDLAFSFCAPTHPDQDSTIDLQPGSSVMIW LTPSWRSALVGFVMQVEVAFSKDYYPATGFGIKCICRWKNKEGGSHRIEKNLHCWAPGKAVLQDHMLVFCDVKMRPRTDE GNDPYILADLVVFEFYPVDNQSIRLDYSFTVERCGVYVITAATGNTSLESISPVLSLDPVELSDDETKDGASYDPTGNAS LENISSALTFDSMDISCNPSEELIKASYDDLQEIDRALFRCVAYLFNDEDIHLVKVEPLVACIDLNVSSRLKVLAKKHLL RVSSNGVIRMLPMGKEILHRVSIGCSEEDSEKISVASSGCWKYDVFLSFSSQDVRKSFLSHLLKAFISKGITMFIDNEIF RRQAISPEVLQAIRESSILIVVFSRDYASSSWLLGELAEIAKSRKELSQIVIPVFYYVDPWHVKTQAGDFGRQFGQTCKK QTEDEKQRWCQALTNIADILGISFKNWDNEADMAETIANDVSSKLNITESEGFGEFVRIENHVSKLNILLSLESEEVRMV GIWGPSGIGKTDIARALYSRLAHRFQRTIFVDMSFVYRRPDYYGAKVDFQTQFLSEVLGREYFKVGMDHLCMVRDMLKEQ RVLIILDDVDDQVRLLDVLVEQTEWFGSGSRIVVITQDIGLLKSYGIDKIYYVDLPSQKEALQMFCQSAFRQNYPPDGFM EIAVEVAEAVGNLPLGLIVLGSYLRGREITEWVDILTQIKDSLDGKMEMILRVAYDSLSDHDDKIIYLHIACLFNYDTVE YVTCLLSDSHLSVVCRLKSLAEKSFIHITENGYITMHHLQQNFGREIVRNESIYSPGKRQFLVDSEDILDVFQDNTGTES VLGISLDISELDRELYISERGFSGMTNLRFLKFYTNLGNKEVNVHLPHGLDYLCPKLRLLHWEAFPMRCMPSHFFPENLV VLAMEASKLEKLWNEAQPLRSLKCMSLRCSLNLREIPDLSHATSLEKLDLRGCSSLTELPSSIWNLHKLKDLDMGYCTHL MTLPTGINLESLHCLNLSGCSRLTDFPEISRSISDLYLDGTAIEEVPWWIENISRLSHLSMNGCNKLNKISPNISKLKFL VEVDFSNCESLTEDSWQNHPEEISTSVTTVNMSGNSFQRLPDTWTSIQPEDLIFHSCRNLVSLPTLPTSLFRLTANNCES LESLHGSFSYPQAAFQFINCFKLNHHARELILQSDCAYAILPGEELPAHFTHRAAGSVLTIYLPRSSLSKRFPSFKACIM IESRSGSFHFGLVWPFKGGSDKIYYSCCLTNTPSTRNHLIVFHCEFSSDDVNDSRAELNYSDVQFEFDCLDDKKEMIQIK ECGIQLLEVSPSADESGKIFKPESGYDSEESDVEDIGSCKRIRVRIDD* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |