Names & Information
Knowledge of BnaC09G0231900ZS:
| Gene Name | BnaC09G0231900ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g18950D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:3837 nt ATGGCTACCTCCTCTTCCACAGTACCTCTTCAACATCAAGTCTTCATAAATTTCCGAGGGAAGGATCTACGCCGTGGATT CGTAGGCTTTCTTGTTGATGCGTTGAAAAGGGAAAAGATCAATGTTTTTATGGACGAATTCGAAGAAAGAGGCCTCCCTT TAGATTCCCTTTTGACTAGGATAGAGGGGTCGAGAGTTGCTGTGGCTATATTCTCTGAGAATTACACTGAATCAAACTGG TGCTTGAAGGAGGCTGAGAAGATGAATGAATGCAGGGAGAAAGGCAATCTGGTGGTAATACCCATATTTTACAAGGTGGA ACCATCCACAGTGAGAGGTTTGAAGGGAGATTTTGGTGATAAGTTATGGATTTTGGCCAAGGGTGATGAGAAGAGGAAGA AACAGTTTGATGAAGCCTTGGAGTCGATTCCTAATCTATTCGGTATCACTGTGGACGATACAAGCGACGAGTGTCAGAAA ATCAATGATATTGTCAAGGCGGTTAAGACAGTCTTGCTCAAGATTTCAGTGATAGAGAGCCAAGACGTCACTGGTGATTC GTCAGAGACTAGTGATGATGGGACTGCCTCAGGAGGAAAAAAGCATAGGACTTTTGGAATGGAGAAACGTCTCAAGGAGC TGGAAGATAGGTTTGGTAAACACAAAGAAACTCGTATCATTGGAGTTGTTGGGATGCCTGGAATTGGTAAAACCACACTC ATGAAAGAACTCTTTGAGATGTGGAAGCCTAAGTTTGTTAGGCACGCTCGAGTCGACAAAATCCGTGTACAGGCGAAGGA TTTGGGGTGTGATTTCTTGCCCACATTGCTTTTAGAAGAGCTATTGGGATTGGAAGATCCTCACACAGAGAATGTTGAGG ACCCGTACGAAACCTACAAATGTCAACTGCTTGGACGCAAAGTTTTTGTCGTTCTCGATGATGTTAGTAACATGGAACAA ATAGATGCTCTTCTTGGGAAACGTGACTGGATTAGTGACGGAAGCAGGATTGTCATTGCAACAAGTGACGCGTCCTTAAC AAATGGTCTGGTTGAAGACACATACGTGTTCCAAAACCTGGACCATAGAGACAGCTTACAACTTTTTCGCTATCACGCCT TCAGTGATGATCATCAATCCAATCCTCCCAAGGAAGATTTCACGAAGCTGTCAGAAGAGTTTGTACATTATGCAAGAGGC CATCCACTAGCTCTCAAAATGTTGGGTGTAGAGCTATACAACAAAAATATAGATCATTGGAAATCGAAACTGAAGACACT CTCTCAAAGTCTGATCCCTAATATTGGAAGGGTCTTCCAAATGAGTTATGATGAACTGCGTTCAGAGCATAAAGTTGCAT TTCTTGATATAGCCTGCTTCAGATCGGAGAGTGTGGAATATGTAGAAAGTTTACTGGCTTTGTCTGACACCGAATCTCCT GACACAATGAGTGCAGTAGAAGTCCTCAAGAATAAGTTTCTGATTAATACTTGTGACGGTCGAGTGGAGATGCATGATCT ACTGTACACATTTTCAAGGGAGCTAGATCGTAAAGTATCCACTCAAGATGGTAACAGACAACAACGGAGGCTGTGGCTCC ATCAAGACATAATGAAGGGAGGCATAATTAATGTTCTGCAAAATAAAATGAAAGCTGCCAATGTCAGAGGTATTTTTCTA GACTTGTCTGAAGTGAAAGACCAGACGACCTTAGACTGCGAGCACTTCTTAAGGATGTGCAATCTCCGGTATCTTAAGTT CTATAATTCTCACTGTCCTCAGGAATGTGAAACCAAAAATAAGATAAACATTCCTGATGGACTTAAGCTACCACTGAAAG AGATCCGATGCCTCCACTGGTTAAAATTTCCACTGGAGGAACTTCCTAATGATTTCGACCCGATTAATCTTGTTGATCTC AAGTTGCCCTACAGTGAGATTAAACAACTTTGGGAAGGCGAAAAGGATGTACCATCCTTAAAGTGGGTCGATCTCAATCA CTCAAGTAAGTTATGCAGCTTGTCAGAGTTATCTAAGGCTCGAAATCTTCAACGATTGAATCTTGAAGGTTGCACGGCAC TGAAAATTTTACCACGTGGTATGAAAAAAATGAAAAAGCTTGCTTCCCTGAATCTGAAAGGTTGCACAAGTCTTGAAACT CTTCCAAAGATGAATTTAAATTCTTTGAGAACTCTTACTCTCAGCGGCTGCTCAAATTTTAAGGAATTTCCACTGGTTTC AGAAAATATAGAGATTCTATACTTAGATGGCACATCAATAAGTCAGCTTCCTACGAACATGGAGAAGCTCCAGAGACTTA TTGTACTGAATATGAAGAACTGCGAAAAGCTGGAGGAAATCCCAGTCGGGGTCGGTGAGCTGAAAGCTCTTCAGGAACTG ATACTCTCTGATTGCTCCAAACTCGAGTATTTTCCAGATATCAAGATGAGCTCTTTAAACATTTTACTTTTGGATGGGAC AGCCATAGAAGTGATGCCACCTTTACCTTCGCTACAGTATTTGTGCTTAAGCAGAAGTAAGATCAACTGTCTTCCTGCTG GCATTACTCAACTTTTTCAACTTAAGTGGCTGGATTTGAAGTACTGCAAGAGTCTTACTTCTCTTCCAGAGCTTCCACCA AACCTTCAGTGCTTAGATGCACACGGTTGTAGTTCGCTGAAGACAGTTTCGAAGCCTCTAGCCCGTATCATGCCAACGGA GCAGAACCATTCCACATTCATTTTCACCAACTGTAAGAACCTGGAACAAGCTGCAAAGGAGGAAATCAGCTCGTATGCGC AAAGGAAATGTCAGCTGCTGTCATATGCTCGTACACGCTACAATGGGGGTCTGGTTTCAGAGGCTTTGTTCAGCACTTGC TTTCCTGGATGTGAAGTGCCTTCTTGGTTTTGTTATGAAACAGTTGGATCCGAGCTAGAAGTAAAACTCCTCCCGCATTG GCATGACAAGAGGCTTGCTGGAATAGCTCTATGTGCTGTAGTGTCATTTCATGACTGCCATGATCAAATCAGCCGCTTGT CAGTGACATGCACCTTTAAAGTTAATGTTGAAGACAACTCTTGGATCCCATTTACTTGCCCAGTAGGAAGTTGGACCAGA CAGGGAGACGGAAAATACAAGATTGAATCAGACCATGTTTTTATCGGCTACACCAGTTGCCCATATACTATAACGTGTCC TGAAGACGAGAACTCTGATAAATGCAGTTCCACTGAAGCCTCCCTTGAGTTTACTGTGGCAGGTGGTACAAATGAGAAGG GAAAATTAAAGGTGTTGAAGTGCGGTTTAGGTTTGGTGTATGCAAAGGATAAAGGCAAAAATAGTTCTCATGAAGCAAAG TATGATATGCCTGTGGAAGTGAGTTTTCAAGAAACTTCAAAAGAGGTTGACGGAGAAGGAGCAAAGAAAAGGAAAAAACC GAGAGGTGATGATGGAAGGCCGAAGATGAAGAAAAAATCAAGAAGGGATGATAAAGTTCTGAGCATGGTTGATATTTCAT CTACAGAACGCAGCGAACGTTCTGTCTCTTGCTTTGAGGAGACAAAGATTATTGTCAAGATACCGGCGATTTACTGGTCA TACAAGACAGCTAGTCATGCTGCTGAACTAACTGTAGGGGGTAAAATATTCAGTGTCCTGGGCCACATAGGTCTTCTAGC TGATCCAGAAGGTGGTCAATGCACAGCTTGGGACAAGGGACTTCTCATTGGCGGAGAGAATGTGATTACTTGTTTCGCCA GAGAAGGCTGTACCAATAAACCATCCAGAGAGCTATCGCCTCTCCTTCTTCACTTTATCGCCAACCTTCTCCTCTAG |
| AA seq | Len:1279 aa MATSSSTVPLQHQVFINFRGKDLRRGFVGFLVDALKREKINVFMDEFEERGLPLDSLLTRIEGSRVAVAIFSENYTESNW CLKEAEKMNECREKGNLVVIPIFYKVEPSTVRGLKGDFGDKLWILAKGDEKRKKQFDEALESIPNLFGITVDDTSDECQK INDIVKAVKTVLLKISVIESQDVTGDSSETSDDGTASGGKKHRTFGMEKRLKELEDRFGKHKETRIIGVVGMPGIGKTTL MKELFEMWKPKFVRHARVDKIRVQAKDLGCDFLPTLLLEELLGLEDPHTENVEDPYETYKCQLLGRKVFVVLDDVSNMEQ IDALLGKRDWISDGSRIVIATSDASLTNGLVEDTYVFQNLDHRDSLQLFRYHAFSDDHQSNPPKEDFTKLSEEFVHYARG HPLALKMLGVELYNKNIDHWKSKLKTLSQSLIPNIGRVFQMSYDELRSEHKVAFLDIACFRSESVEYVESLLALSDTESP DTMSAVEVLKNKFLINTCDGRVEMHDLLYTFSRELDRKVSTQDGNRQQRRLWLHQDIMKGGIINVLQNKMKAANVRGIFL DLSEVKDQTTLDCEHFLRMCNLRYLKFYNSHCPQECETKNKINIPDGLKLPLKEIRCLHWLKFPLEELPNDFDPINLVDL KLPYSEIKQLWEGEKDVPSLKWVDLNHSSKLCSLSELSKARNLQRLNLEGCTALKILPRGMKKMKKLASLNLKGCTSLET LPKMNLNSLRTLTLSGCSNFKEFPLVSENIEILYLDGTSISQLPTNMEKLQRLIVLNMKNCEKLEEIPVGVGELKALQEL ILSDCSKLEYFPDIKMSSLNILLLDGTAIEVMPPLPSLQYLCLSRSKINCLPAGITQLFQLKWLDLKYCKSLTSLPELPP NLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCKNLEQAAKEEISSYAQRKCQLLSYARTRYNGGLVSEALFSTC FPGCEVPSWFCYETVGSELEVKLLPHWHDKRLAGIALCAVVSFHDCHDQISRLSVTCTFKVNVEDNSWIPFTCPVGSWTR QGDGKYKIESDHVFIGYTSCPYTITCPEDENSDKCSSTEASLEFTVAGGTNEKGKLKVLKCGLGLVYAKDKGKNSSHEAK YDMPVEVSFQETSKEVDGEGAKKRKKPRGDDGRPKMKKKSRRDDKVLSMVDISSTERSERSVSCFEETKIIVKIPAIYWS YKTASHAAELTVGGKIFSVLGHIGLLADPEGGQCTAWDKGLLIGGENVITCFAREGCTNKPSRELSPLLLHFIANLLL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like; K16226 disease resistance protein RPS4 (A) |