Names & Information
Knowledge of BnaC09G0232600ZS:
| Gene Name | BnaC09G0232600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g18870D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:2910 nt ATGAAAAGGCTCAGCACCATTCCATGTAGTATGGAAGGAGAAGAGAAAGTGGCTAGTCTCTTTGGAATCGAACATCGGAT CAAGCAAGTCGAGGAAAAGTTTGGTTTCGGTTACAGCGACGAAACTAGAATTGTGGGAATTGTTGGGATGCCTGGTATTG GCAAAACCACTCTCGCAACGGAGCTGTTCAAGAGGTATCAAAACAAGTTCATTCGCTGCGTGAATTTTCTGAAGATCCGT AAGGAGACGGATGCTGGCCATTTGAGGATGACGTTCCTTAAAGACTTACTTCCGAAGACAAAGACAAACATAACTGATAA GACGACGTATGACTGTCTGAAGAGTGAACTGGTCGTGAACAAAGTCTTTGTTGTTTTAGACGATGTGAGTAGCGAAAAAC ATATAAAGACTCTTCTTGGGGACCTAAGCTGGATCAAGAAAGGAAGCAGGATTGTTATTACAACCCGTGACAGGGCATTG ATCGCCGACTTAGATCCAAATCCTTACGTGGTTCCAAGATTGAACCCTCGAGATGGGTTGATGTACTTCAGCTTCTTTGC TTTAGGGGGTTTCAATCCCGAGATGGGAGATTATATGAAAATGTCTAGAGTGTTTGTGGATTACGTTAGAGGCAACCCAA AAGCTCTCAGAGAATTGGGTAAGGAACTTTGTGGGAAAGGGGAGACGCTCTGGAAAGCACGGCTTAATACATTGACAACA TGTTCCAACAAGAGCATTCAAGATCTGTTGAAGATAAGCTATGATGAGCTTAGTGAAGAGGAGAAGGATGCGTTCCTTGA CATTGCGTGTTTCTTCAGATCAGAGGACGAGTTTTATGCGAGAAGCTTACTGGATCATGGGGATCATGATGATGAGTCCT CTGAAGGTGCCAGTGAGATAACGGATCTTGCCTACAAGTTTCTAATTAGTATATCTGGCGGACGCGTAGAGATGCATGAT TTACTTCATACATTCGGCATGGAACTTTGTTCGTTATCATCCACAGAAGAAAAAAGTAGGCTGTGGAAATGTCAAGACAT TGTCGCTGCATTGCATGACAAGATGGATACCGAAATTGTGACATCTGTGAGAGGCATTTTTCTAGACATGTCTCAAGTAA CGGACATGCCTTTATACAGTTGGGTCTTTGCCAAAATGTGCAATCTATGGTACCTTAAATTCTACACTTCTACTTGTCCT CGAGAATGTGAAGGCGACTGCAAGTTAAATTTCCCTGATGGACTTTCATTACCTCTGGAAGAGATCCGGTACCTGGACTG GCTGAAATTCCCGTTGGAGGAACTTCCATCTGACTTCAACCCCAAGAATCTTGTTGATCTAAGGCTGCCTTACAGCAAGA TTAAACAAGTTTGGAAAGCTTATAAGGATACACCGAAACTGAAGTGGGTGGATCTTAACAACTCGAGAAAGTTGCAGACG TTGGCAGGGTTCTCAAAGGCCCCAAATCTTTTGAGACTAAATCTTGAAGGTTGCACAAGCCTAGAACGTTTATCTGAAGA GATGCAAACAATGGAAAGTCTTGTTTTCTTGAACTTGAGAGGATGCACAAGTCTCTCGCATCTTCCGCAGATGAATCTGA GTTCATTGAAAACTCTTATCCTCAGCAGCTGTGCAAAGCTTTATAGATTTCAGCTAATTTCCGAAAATCTAGAATCTCTC TACTTGGATGGAACTGCAATAGAGGATCTCCCTTCAGACATTGTGAAGCTTCAAAGACTTGTCTTATTGAATCTAAAGGA GTGTAAAAGGCTGAGGAGTCTTCCAGAGTGTATAGGAAAGCTTAAAGCTCTTGAAGAACTGATTCTCTCTGGCTGTTCAA ATCTCGAGACTTTTCCAAATGTTGAAGACAGCATGGAAAATTTCCGGGTTTTACTACTTGATGGGACTTCAATCTTAGAG GTGCCAAAGATACTTCCCGGTATTAACAGCCTGTTGTTTCTGAGGCGTATATCTTTTAGCGGAAATAGTGTGATCAGCAG CTTAGGATCTGACATCAGTCGAATGTATCATCTCAAATGGTTGGACTTGAACTCTTGTGAGAAACTCAGGTCTCTTTCGA CGCTTCCACCAAATCTCCAGTGGTTAGATGCACATGGTTGCATCTCCTTGCAAACAGTCTCGAGTCCTCTAGCCTTTATT GTGCCAACAGAACAGATTCACAACACTTTCACTTTCAGCTTCACTAAATGTTGTAAACTCAATGAGGCTGCAAAGAATGA AATTGCATCCCACGTTAGGAGAAAATGCCAGCTAGTCTCATCAGATGATCACCACAATGGGAATTTTATCTCGACTTGCT ATCCTGGATACGAAGTACCTGCATGGTTCAGTCACCAAGCCTATGGTTCAGTGTTAGAACCAAAGCTGCCTCCACATTGG TGCGACAACAAGTTTCTAGGAATATATCTATGTGCCATTGTCTCGTTTCGTGACTGCAGAGATCAGAGCAGCCGCATCCT GGCTAAATGTACCTGTGAGTTTGAAGACTTAGATGCACCATGTAGCCGGTTTAGCATTCCTGTTGAAAATGAGCCGCGTA ATATCGAGTCAGACCATGTCTTCATCAGCTATATAAGTTGGTCAAACATCAAGAAACGTCAAGAAGTAGAGTTCAAGAAA GGATGTGTTCCTACTAGAGCTGTCCTTAGGTTCAAAGTGACTGATGGGGCTGGTGAAGAGATTCCACAGTGTGAAGTTGT GAAGTGTGGGTTCAGTTTGGTGTACGAACCTGATGATGAAGTTAGTAATGTTGTTTCTTTGCCGGCGGCAAGGACGATGT TGAATGGTGAGAGTAGTCAAGGTGAGGTAACCACTTTCCAATCTGCAGAAGAAGGTCCTACTGCAAGTCCAACAACAGCC GACTCTACAAGTAAGAACAATAGTTTCTAG |
| AA seq | Len:970 aa MKRLSTIPCSMEGEEKVASLFGIEHRIKQVEEKFGFGYSDETRIVGIVGMPGIGKTTLATELFKRYQNKFIRCVNFLKIR KETDAGHLRMTFLKDLLPKTKTNITDKTTYDCLKSELVVNKVFVVLDDVSSEKHIKTLLGDLSWIKKGSRIVITTRDRAL IADLDPNPYVVPRLNPRDGLMYFSFFALGGFNPEMGDYMKMSRVFVDYVRGNPKALRELGKELCGKGETLWKARLNTLTT CSNKSIQDLLKISYDELSEEEKDAFLDIACFFRSEDEFYARSLLDHGDHDDESSEGASEITDLAYKFLISISGGRVEMHD LLHTFGMELCSLSSTEEKSRLWKCQDIVAALHDKMDTEIVTSVRGIFLDMSQVTDMPLYSWVFAKMCNLWYLKFYTSTCP RECEGDCKLNFPDGLSLPLEEIRYLDWLKFPLEELPSDFNPKNLVDLRLPYSKIKQVWKAYKDTPKLKWVDLNNSRKLQT LAGFSKAPNLLRLNLEGCTSLERLSEEMQTMESLVFLNLRGCTSLSHLPQMNLSSLKTLILSSCAKLYRFQLISENLESL YLDGTAIEDLPSDIVKLQRLVLLNLKECKRLRSLPECIGKLKALEELILSGCSNLETFPNVEDSMENFRVLLLDGTSILE VPKILPGINSLLFLRRISFSGNSVISSLGSDISRMYHLKWLDLNSCEKLRSLSTLPPNLQWLDAHGCISLQTVSSPLAFI VPTEQIHNTFTFSFTKCCKLNEAAKNEIASHVRRKCQLVSSDDHHNGNFISTCYPGYEVPAWFSHQAYGSVLEPKLPPHW CDNKFLGIYLCAIVSFRDCRDQSSRILAKCTCEFEDLDAPCSRFSIPVENEPRNIESDHVFISYISWSNIKKRQEVEFKK GCVPTRAVLRFKVTDGAGEEIPQCEVVKCGFSLVYEPDDEVSNVVSLPAARTMLNGESSQGEVTTFQSAEEGPTASPTTA DSTSKNNSF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine Rich Repeat |
| KEGG | protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like; K16226 disease resistance protein RPS4 (A) |