Names & Information
Knowledge of BnaC09G0240200ZS:
| Gene Name | BnaC09G0240200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g19410D [Brassica napus] |
| Best Hit (SwissProt) | Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response OS=Arabidopsis thaliana GN=VICTR PE=1 SV=1 |
| NT seq | Len:2676 nt ATGGAAGGTTATAGGGGAGCCAACCCTGATGACTATAACATGAAGTTGAGTTTGCAAAGACATTTTCTGTCTGAAATTTT AGGCACAAGGCACACACAGATAGATCACTTAGGTGCGGTGGAAAATAGACTAAAAAACCAGAAAGTCCTTATCTCTATCG ATGATTTGGATGATCAAGTGGTGCTAGATGTATTGGCAGGTCAAGCTCATTGGTTCGGAAGTGGAAGCAGAATAATTGTG GTTACAAAAGATAGGCATTTTTTAAGGGCTCATGGGATTGATCATATTTACGAGGTCTGTCTCCCATCTGAAGAGCGTGC TCTGGAGATACTTTGTCGATCTGCTTTCAGGCAAAACTCTCCACGTGAAGGATTTGAGAAGCTTGCAGTTGAAGTTACAA GACATGCCGGTAGTCTTCCTTTGGGTCTTACTGTTTTAGGTTCCACTTTGCGGGGGAGGGACAAGGCGTATTGGATGGAT ATTCTGCCAACGCTTCAAAGCGGTGTTGATGAGAAAATAGAGAAAACCCTAAGAATTAGCTATGATGGGTTGGATAGAGA AGAAGATAAAGTGATATATCGTCACATTGCATGTCTTTTCAATGGTGAAAAAATCCCTGACATTAAGTTGTTGCTGGAAG ATAGGAACCTGGGTGTAATTGTTGGGATCCAAAACCTAGTTGATAAGTCTCTCATACACGTAAGAAGCGATACCGTGGAG ATGCACAGTTTGTTGCAAGAAATAGGTAGAAAAATTGTTCGTGCACAGTCCATTGACGAGCCTGGAAACCGAGAATTTCT GGTGGATTTGGATGATATATGCGATGTACTTGGTGAAAACAGTGTAAGTGGTTCCTACGGTACTAAGAAAGTTTTAGGTG TAGCACTGGATATGGACAAGATTCATGATGAGTTACATGTCCATGAAAATGCCTTCAAAAGGATGAGTAATCTCCGTTTC CTTAAATTTTACACGTTTGGAAAAGAAGCCAGATTGCGGTTAAACGAAAGCTTTGACTATTTGCCCTCAAAACTCAAGAT TATTGTGTTGGGACAAATATCCAATGAGATCAATCTTGAAAACTTGTGGGAAGGCGTCTCGCCGCTTGGACGTCTTAAGA AAATGGATTTGTGGGGATCTAAGAACTTGAAAGAAATTCCCGATCTTTCGAAAGCCACCAGTCTAGAGAAATTAGATCTC AAGGGCTGTTCTAGTTTGGTGGAGCTCCCTTCCTCTATTAGCAAACTCAATAAACTGACTGAGTTAAACATGCCAGCATG TACAAATCTAGAGACTCTTCCGACTGGAATGAACCTTGAATCTCTCAACCGCCTCAATCTCAAAGGATGCACACGCTTGA GAACTTTTCCAAATCTCTCAAGAAACATCTCAGAGCTTATTCTAGACGAAACATCCATTACCGAATTCCCTTCAAATTTG TATCTCGAGCATCTTAATTTGTTTTCCATGGAAGGTATAAAGAGTGAGAAGCTATGGGAAAGAGCACAGCCGCTTACACC TCTCATGACCATGTTATCTCCTTCTTTGAGAATCTTGTCTCTCTCGGATATCCTAAGTTTAGTGGAGCTTCCTTCTTCAT TTCATAATCTCCATAAACTTACAAATTTGAGCATTACAAGATGCAAAAACCTAGAGATTCTTCCCACGGGAATCAACCTT CCATCGCTCATTCGCCTTATTCTTAGTGGGTGCTCGCGGTTGAGGAGTTTTCCTGATATCTCAAGAAATGTCTTAGATCT CAATCTAAGCCAAACAGGAATAGAAGAGATTCCTTTGTGGGTTGAGGACTTCTCTAGGCTCAAATACCTATTTATGGAAA GTTGCCCTAAGTTAAAATATGTATCCATTTCTACACTGAGACATCTTGAGATGGTTGACTTTTCAAACTGTGGGGCATTG ACTGGAGCTGGTATGATTGGTTATCAAAGTGGAGAGGCAATGAGACCAGATGATATTGAAACAGAGGTACTAGTCCCCGA GGAGGCCTCTTCTTCTTTTCAAGATAATTTTGTCCCAAGAGTCAAATTCAGACTCATCAACTGCTTTGACTTGAATCTTG AAGCTCTTCTTCAGCAACAATCAGTTTTTGAGCAACTCATCTTGTCTTGTGAAGAAGTGCCTTCATATTTCACTCATAAA GCTGCAGGAGCATCCACATCTCTGACCGTCCCTCTGCTTCAAACCTCCCTCTCTCGACAAATCTTCGGACTTCGAGCTTG CGCTGTTGTTGTTTTTGACCCTATACCAACCCTTGGTTCCGTTTGCGTGTATATCAAGGTAAGTTGTAGGTTCAAAGACG AACACGGAAACTACTTTGATTCTGCTTATCATCAAGAAAACATCACGGCTTATAAGAAGGGTAGCCATATGTTTATATTC GACTATTGTTTCCCTCTAAACGAAGACAATGCTCATCTAGCTAAACTTAGCTGCGATCACGTGGATATACAGTTTCATTT CCCTTCGAATGTTCCCTGCAAACTGATAGAATGGGGTATACGACTGATAGAGGATTTTTCATCACCGGAGAACCAACTAT TTAGTCCATCCACTGATGAACACAATGTGGCTGATGAGACTGACCACGGTGAAGAGTGTGAAGTCCAGGGCTGTTTTTCA TTTCTGAATCTGTTTTTTGCTATTTGTCAATGGTGA |
| AA seq | Len:892 aa MEGYRGANPDDYNMKLSLQRHFLSEILGTRHTQIDHLGAVENRLKNQKVLISIDDLDDQVVLDVLAGQAHWFGSGSRIIV VTKDRHFLRAHGIDHIYEVCLPSEERALEILCRSAFRQNSPREGFEKLAVEVTRHAGSLPLGLTVLGSTLRGRDKAYWMD ILPTLQSGVDEKIEKTLRISYDGLDREEDKVIYRHIACLFNGEKIPDIKLLLEDRNLGVIVGIQNLVDKSLIHVRSDTVE MHSLLQEIGRKIVRAQSIDEPGNREFLVDLDDICDVLGENSVSGSYGTKKVLGVALDMDKIHDELHVHENAFKRMSNLRF LKFYTFGKEARLRLNESFDYLPSKLKIIVLGQISNEINLENLWEGVSPLGRLKKMDLWGSKNLKEIPDLSKATSLEKLDL KGCSSLVELPSSISKLNKLTELNMPACTNLETLPTGMNLESLNRLNLKGCTRLRTFPNLSRNISELILDETSITEFPSNL YLEHLNLFSMEGIKSEKLWERAQPLTPLMTMLSPSLRILSLSDILSLVELPSSFHNLHKLTNLSITRCKNLEILPTGINL PSLIRLILSGCSRLRSFPDISRNVLDLNLSQTGIEEIPLWVEDFSRLKYLFMESCPKLKYVSISTLRHLEMVDFSNCGAL TGAGMIGYQSGEAMRPDDIETEVLVPEEASSSFQDNFVPRVKFRLINCFDLNLEALLQQQSVFEQLILSCEEVPSYFTHK AAGASTSLTVPLLQTSLSRQIFGLRACAVVVFDPIPTLGSVCVYIKVSCRFKDEHGNYFDSAYHQENITAYKKGSHMFIF DYCFPLNEDNAHLAKLSCDHVDIQFHFPSNVPCKLIEWGIRLIEDFSSPENQLFSPSTDEHNVADETDHGEECEVQGCFS FLNLFFAICQW* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |