Names & Information
Knowledge of BnaC09G0266400WE:
| Gene Name | BnaC09G0266400WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g23580D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=1 SV=1 |
| NT seq | Len:3615 nt ATGGAGTCTCTTCCTTCTTCCTCTGCAGAGCTCGACGTGTTTCTCAGTTTCAGAGGCTTTGACACACGCAACAACTTCAC CGGCCATCTCCAAAAAGCCCTCCGCCTTAGAGGAATAGACTCCTTCATCGACGACAAACTCCGCCGAGGAGACGACCTCA CTGCTCTTTTCGACAGAATTGAGCATTCAAAGATTGCCATCATAGTCTTCTCCAAGAACTACTCGAACTCCGCGTGGTGC CTCCGAGAGCTTGTTAAGATCCTAGAGTGCAGGGACAGAAACCAGCAGCTGGTGATACCAATCTTCTACAAAGTAGACAA GTCCGAATTAAAGAATGTTCCAAAGAAGAGTTTTACTGAAGTTAAGGAGGAAGAGACTTCAACGTGGGAAGCTGCACTGA CCACAGCATCCAACATCTCCGGCTATGTAGTCAATGAGTTCAGTACGTCTGAAGCCAAACTTGTGGACGAGATTGCTGTT GACACATTCAAGAAACTGAATGATTTGGCCCCCATTGGCAACGAAGGTCTGGTGGGAGTAGACTCACGTCTAGGGACTCT AGAAAAGCTTTTATGTTGCGATGAGGTGGACTCTGTTCATGTCATTGGCATTATTGGGATGGGCGGAATTGGTAAAACTA CTCTTGCTGATTGCTTGTATGGACGAATGCGAGGCCAGTTCGACGGTAGCTGCTTTCTTACAAACATCCGTGAAAACTCG AGTAGAAGCGGGTTAGAGTCTTTGCTGCAGAAACTCTTCTCCACGTTACTGAATGATAGAGATCTAGAGATCGGAGCTCC TGGAAATGCACATGAGAGGTTTGAGCGTCGGCTTAAGAGCAAGAGGCTGCTTATTGTGCTTGATGATGTGAACGATGAGA AGCAGATAAGGTATCTAATGGGGCACTCCAAATGGTATCAGGGAGGAAGTAGAATCATCATAACTACTAGAGATAGTAAA CTAGTCGAGGCGGTCAAGGGTCGAAAATATGTGCTCCCTAAACTGAATGATAGAGAAGCCCTGAAGCTCTTTTGCTTGAA TGCATTTAACGACTCTTGCCCTTTAAAAGAGTTTCAAAGTTTGACAAATATGGTTCTGGATTATGCTAAGGGACACCCTT TGGCGCTTAAGGTGTTAGGGTCTGATCTTTGTGAGAGGGATAATCAGTACTGGGAAGATAAATTGGATAGGCTGACAAGT AAATCACATGGAGATATCTATGAAGTTCTGGAAACAAGCTATGAGGAGCTTAGCATTGAGCAGAAGAATGTTTTTCTGGA TATTGCATGTTTCTTCAGATCAGAGAAAGTGGACTACGTGAAAAGCCTCCTCAACAGTCATGGTGTGGATGTGTCTAGCG TGATAGAGGATCTACTTGACAAATGTTTGATTACTCTTTCTGATGATCGCATCGAGATGCATGACATGTTGCAGACTATG GGCAAAGAGATTAGCTTAAAAGCAGAAACCATCGCAATAAGAAACTCTAGGTGGCTATCACCACATGGCACCCCGTTTCA GTCGCATATCAGACTATGGGATAGTGACTATATTTGTTACCTTCTAACTAAGGGCTTGGGAACTGACATGATAAGAGGAA TTTTCCTGGACACATCAAAACAAGGAGCAATGCGGCTAAGCGCCAAAGCTTTCAAAGGGATGTGCAATCTCAAGTACCTG AAAATTTATGATTCTCGTTGCTCACGTGGATGTGAAGTGGATTGTAAAATTATCCTACGTAAGGGGCTTGATTTCCTTTC TGATGAGCTTACATATCTACACTGGTATGGATGCCCACTACAGAGTCTCCTTCTGAACTTTGACCCCAAGAACCTTGTAG ACCTTAAGCTTCCATATAGTGAGTTAGAAGACATTTGGGACCAAGACAAGGATGCTGGAATGCTCAAATGGGTGGATCTC AGTCACTCGTTGAGATTAAGCCGATGTTCAGGTTTGGCTAATGCTCAAAATCTTGAGAGGTTGAATCTAGAAGGATGTAC AAGTTTGAAGAAGTTGCCATCATCCATGAAATGTTTGGAGAAGCTTATTTACCTAAATCTCAGGGAGTGCACAAGTCTCA AGAATCTTCCAAAAGGACTCAAAACTCAATCCTTGGAAACTCTTATTCTCAGTGGCTGCTCCAGTTTCAGGAAATTCCCA ATGATCTCAGAAAATGTTGAAGTTTTACTTTTAGATGGCACAGCAATAAAGAGTCTTCCTGAATCCATTGAAAGCTTGAG AAAACTTGCTTTGCTGAATTTGAAAAACTGCAAAAAGCTGAAGCATCTTTCTTCTGATCTTTATGAGCTGAAATGTCTCC AAGAGCTAACACTCTCAGGATGCTCACAGCTAGAAGTTTTTCCGGAAATCAAGGAAGCCATGGAATCTTTGGAGATTTTA CTTCTGGATGATACAGCCATCACTGAGATGCCAAACATCAAGCATCTAAGAAATATCAAGACATTTTCTTTGTGTGGAAC AAGCAGTCAAGTTTCTGTTAGTATGTTCTTCTTGCCACCTCCATTGGGCTGCTCTCAGTTAACGGATCTTTACCTCTCAC GATGCGGTCTGGACAAACTACCAGATGATATAAGTGGCCTATCCTTGTTGCAGTCTTTATGCTTAAGCGGAAACAACATT GAGACTCTGCCAGAGAGATTCAACCAGCTTCATAATCTGAAATGGTTTGATCTTAAGTATTGCAAAATGCTCAAGTCTCT ACCTACCCTTCCACAAAACCTTCAATATCTGGATGCTCATGAGTGTGAGTCACTTGAAACTCTGGCAAATCCATTGACTC CTTTGACAGTAGGAGAGAGGATACATTCTATGTTCATCTTTACCAACTGTCAGAAGCTGAACCAAGATGCTCAAGAGTGT CTGGTAGGTCATGCTCGGGTCAAGAGTCAGTTGATGGCTAATGCTTCTGTGAAACGTTATTACCGGGGATTTATACCAGA ACCTCTGGTTGGAATCTGTTACCCGGCGAATGAAATACCAAGCTGGTTCTGCCACCAAAGACTAGGACATTCACTAGAAA TCCCATTGCCTCCTCATTGGTGTGACACTAACTTTGTTGGACTTGCCTTATCTGTAGTTGTCTCATTCAAAGACTATGAA GACCGTGCTAAGCGTTTCTCGGTTAAGTGCTCCGGCAAATTCGATAACCAAGATGGTTCCTTCACAGGATTTGACTTTAC GCTGGCCGGCTGGAACGAACCCTGTGGATCGCTTAGCCATGAACCAAGAAAGCTTACTTCTGACCATGTTTTTATGGGAT ACAACAGTTGCTTCTACGTCAAGAAACTCCATGGAGAGAGTAGCAGCTGCTGTTACACAAAGGCTTCTTTCGAATTCTAT GCAACGGATGATGAAAGGAAGAAGAAGCTCGAGACTTGTGAGGTGGTCAAATGTGGGATGAGTTTAGTGTATGTTCCTGA TGATGATACTTGTATGTTGTTGAAGAAGACGAATCTGGTTCAGTTGAGTACGAAGACCAAACCAAGCTGTTCCTACGGTC TTGATGATGTCAGACTCAAGAGAGGACGATGCCAGGTTGGTGGTGGTGATGAAGAAGCAGATTGTAAGAGAACGAAAGAG AAGATTTTGGTGTGA |
| AA seq | Len:1205 aa MESLPSSSAELDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDKLRRGDDLTALFDRIEHSKIAIIVFSKNYSNSAWC LRELVKILECRDRNQQLVIPIFYKVDKSELKNVPKKSFTEVKEEETSTWEAALTTASNISGYVVNEFSTSEAKLVDEIAV DTFKKLNDLAPIGNEGLVGVDSRLGTLEKLLCCDEVDSVHVIGIIGMGGIGKTTLADCLYGRMRGQFDGSCFLTNIRENS SRSGLESLLQKLFSTLLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYLMGHSKWYQGGSRIIITTRDSK LVEAVKGRKYVLPKLNDREALKLFCLNAFNDSCPLKEFQSLTNMVLDYAKGHPLALKVLGSDLCERDNQYWEDKLDRLTS KSHGDIYEVLETSYEELSIEQKNVFLDIACFFRSEKVDYVKSLLNSHGVDVSSVIEDLLDKCLITLSDDRIEMHDMLQTM GKEISLKAETIAIRNSRWLSPHGTPFQSHIRLWDSDYICYLLTKGLGTDMIRGIFLDTSKQGAMRLSAKAFKGMCNLKYL KIYDSRCSRGCEVDCKIILRKGLDFLSDELTYLHWYGCPLQSLLLNFDPKNLVDLKLPYSELEDIWDQDKDAGMLKWVDL SHSLRLSRCSGLANAQNLERLNLEGCTSLKKLPSSMKCLEKLIYLNLRECTSLKNLPKGLKTQSLETLILSGCSSFRKFP MISENVEVLLLDGTAIKSLPESIESLRKLALLNLKNCKKLKHLSSDLYELKCLQELTLSGCSQLEVFPEIKEAMESLEIL LLDDTAITEMPNIKHLRNIKTFSLCGTSSQVSVSMFFLPPPLGCSQLTDLYLSRCGLDKLPDDISGLSLLQSLCLSGNNI ETLPERFNQLHNLKWFDLKYCKMLKSLPTLPQNLQYLDAHECESLETLANPLTPLTVGERIHSMFIFTNCQKLNQDAQEC LVGHARVKSQLMANASVKRYYRGFIPEPLVGICYPANEIPSWFCHQRLGHSLEIPLPPHWCDTNFVGLALSVVVSFKDYE DRAKRFSVKCSGKFDNQDGSFTGFDFTLAGWNEPCGSLSHEPRKLTSDHVFMGYNSCFYVKKLHGESSSCCYTKASFEFY ATDDERKKKLETCEVVKCGMSLVYVPDDDTCMLLKKTNLVQLSTKTKPSCSYGLDDVRLKRGRCQVGGGDEEADCKRTKE KILV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |