Names & Information
Knowledge of BnaC09G0288300ZS:
| Gene Name | BnaC09G0288300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 19 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3399 nt ATGCTGCAGCCACGGGCATGGAAGCTGCGTTTTGTAAACTCGCCACCACCGATGATATTTACGTTTTCCAGGATCGAGGC GGAGGACGGTTCTCCGATAGCAATCGAGCTCCTCGATGCCGCCACAAACGCTCGAGTCACCTCCGAGTTGCGGCTCGAGA TCGTAGCGCTGAACGCTGATATCGCCGAGGAAAGCTTCACCACCACCGAGGAGTTTAACAGGAATATTCTCCGACCACGG CAAGGGAAACCACCATTGCTCGTCGGAGACCTGACCGTGACGCTTAAAGACGGGGTCGGAGTAGTCAACGGCGACGTCAC TTTCACAGAAAATTCGAGATGGACGAGATGCAGGATGTTCCGATTAGGTGCTAAAGTTACACAACAAGGAGGAGTTGCGG AGGCCATAAGTAGAGCCTTCGTGTGCAGAGATCGTCCAGGAGGAGAATGTGAATACGACATGACCAAACACGGAGTTAAA GAATCATCTTCACCGGGCGGCGGCAATCAACAACAGAAGCAGAGACGCCAGCTTCAGATCCGTGGTCATCGTCCTTCACC TCTCAGCGTTAACAAAGACTCCCACGTGATTAAGAAACCTCCCACGTTAACTCCGCGAGAGCCGGTGGTTGTCTCGCCCA AGGTCGTACACACCACCATGAGTGATTTCAGGAGCGTCGTCCACCGACTCACCGGGGCTAACAACTCTGTTTCCGAACTG CAATTTTCTGCATCATCCCCCTCTACTGATTATGAAGTCATAGTCATATACAGGAGAGGTGACATAACCAATGATGCTTT TGTTAAGGTCGTCCAGCGACTCACCGGGATTCCTAACTCTGCCTCTCTGCCTCTTAACTCATACGTTGAAATTGAAAAAG GGTCCTCAAAGTATCTGCAAGACACTGAACTAAGCACATCCGCCATTGGGGAATATGATGTCGTAATCAGATACATGAGA GGTTGCATAAGCAAAGGTGATTTCATCAGCCATCTTCGTGCTGCCCTCTGCCGGAGAGGGGTTTCTGTCCGCCAAGACAT CGATGAAGTTTACACAGTTCCAGAATGTAGGGTTTTGATCATATTCTTGACCAGCACATACGTCCCTTCCAACCTGGTAA ACATTGTTGAACAGCAAAGTAAAAAGCCTCGAGTGGTTTACCCGATTTTTTATGGAATTTCACCATCTGATTTGATCACT AATAGCGAGTATTATGAGAGTTTTTCCCTCCAAGACGAGCCAAAACGATGGCAGGCTGCTTTGGAGAAAATAACTCAGAT GCATGGCTACATATTGACTACAGATAAGTCCGAGTCTGACTTCATAGACGAGATTGTCAATGATGCTTTGGAGGTGCTAC GTTCCAACTATAAGAAGAATATTATTGGGATGGATACGCAGATAAAGGAGATCTTGTCACTGCTATGCATTGAGTCTCAA GATGTTCGCCGCATAGGTATATGGGGTGCGGTTGGTATAGGAAAAACAGCCGTTTCTGAAGAAATCTTCCATAGAATCTC TGTCCAATATGAGACTTGTGTCTTCCTCAAGGATCTCCATAAAGAAGTCGAGCTAAAAGGGTACGATGCTGTGAGGGAGG AACTATTGTCTAAACTTTTAGAGGTAGAACCAGATGTCGTACGTACTTCAAACATTAAAACGAGTTTCTTGAGGAACAGG CTTCAGCGTAAAAGGGTCCTCGTAGTTCTCGACGATGTGAAAGATTTCAGGGATGTTGAAACATTTGTGGGGACGCTTAT CTATTTTGGTCCAAGAAGCAGAATAATCATAACGTCTAGGAACAGACATGTTTTTGTACTATGCAAAACCGATCATGTCT ATGAGGTCAAGCCATTAGAATTTCCCAACTCTCTACATCTTCTGAACCCCGGAATATTTCAGAGTGGTCTGTCACCCGAG CTTTACAAGACATTGTCACTTGAGCTGGTCAAATTCTCAAATGGAAATCCTCAGGTTCTTCAGTTCTTAAGCAGATCCAG CAGAGAATGGAAAAGTTTATCACAAGAAATTCAGAAATCTTCTGCCATTTACATTCCAGGTATATTCGAAAGAAGCTGTT GTGGGCTTGATGAAAACGAAAAGAGTATATTTTTAGACATTGCATGTTTCTTTAGAAAGATGGATAAAGACGACGTTGCA ATGTTGCTTGATGGATGTGGTTTCTCTGCACATATTGGATTTAAAAACCTTGTTGACAAATCACTGTTAACCATATCACA CAATACGGTGGACATGCTCTGGTTCCTCCAGGCAACAGGCCGAGAAATTGTTCGCCAAGAATCTATTGACAGGCCAGGGG ACCGCAGCAGGTTGTGGAATGCTGAAGATATTAGAGACGTATTCCTAGACAACACTGGCACGTCAGCTATTGAAGGGCTT TTCCTGGACATGTCGCAGCTGAAATTCGATGCAAGTCCCAATGTATTCGACAAAATGTGTAACCTTAGACTGTTAAAGTT TTATTTCTCCGAGTTGATAGAGAACCATGGAGTGTCTTTACCTCAAGGTCTTGAATACTTGCCGACCAAGCTAAGGCTTC TGCACTGGGAATACTATCCTATAAGCTCTTTGCCGCAATGTTTTGATCCAAAGAACCTCATAGAGCTTAACATGCCAAAT AGTTGTGTGAAGAAACTTTGGAAAGACAAAAAGAGTCTGGAAAACCTTAAAAAGATGAGACTGAGCTACTCCTACCAGTT AACAAAGCTTCCAAGACTTACAAGTGCGCAAAACCTCGAGCTTCTTGATCTTGAAGGTTGTAAGAGTTTGGTGAGCATTA GCCACTCTATCTGTTATCTTAAAAAGCTTGTTTCTCTGAATCTGAAGGACTGCTCGAATCTGGAGAGTGTACCATCTACC AGTGATTTAGAGTCTCTTGAGGTTTTGAATCTTTCTGGCTGCTCGAAGCTAGAGAATTTTCCGGAGATCTCACCAAATGT GAAAGAATTGTACTTGGGTGGGACTGTGATACAAGAAATACCATCATCGATCAAGAACTTGGTGCTTCTTGAAAAACTTG ACCTGGAAAACAGCAGACGCCTCGTGATTCTTCCAACGAGCATATGCAAGTTAAAGCATCTCGAAACGCTGAATCTGTCA GGCTGCTCAAGCCTTGAGAATTTTCCAGACTTGTCTAGAAATATGAAATGCTTAAAGTATCTGGATTTGAGCAGGACGGC CATTAGAGAGCTACCCTCCTCCATTTCATATCTGACTGCTCTTGAAGAAGTAAGATTTGTGGGATGCAAGAGCCTCGTAA GATTGCCTGACAACGCGTGGAGCCTAAGATTCAAGGTTGAATTTCGCCAGATTGATACGGAGAAGTTTTCGAAACTGTGG AATAGATTTGGATGGCTCAAAAAAGTTCACATCTCTTAG |
| AA seq | Len:1133 aa MLQPRAWKLRFVNSPPPMIFTFSRIEAEDGSPIAIELLDAATNARVTSELRLEIVALNADIAEESFTTTEEFNRNILRPR QGKPPLLVGDLTVTLKDGVGVVNGDVTFTENSRWTRCRMFRLGAKVTQQGGVAEAISRAFVCRDRPGGECEYDMTKHGVK ESSSPGGGNQQQKQRRQLQIRGHRPSPLSVNKDSHVIKKPPTLTPREPVVVSPKVVHTTMSDFRSVVHRLTGANNSVSEL QFSASSPSTDYEVIVIYRRGDITNDAFVKVVQRLTGIPNSASLPLNSYVEIEKGSSKYLQDTELSTSAIGEYDVVIRYMR GCISKGDFISHLRAALCRRGVSVRQDIDEVYTVPECRVLIIFLTSTYVPSNLVNIVEQQSKKPRVVYPIFYGISPSDLIT NSEYYESFSLQDEPKRWQAALEKITQMHGYILTTDKSESDFIDEIVNDALEVLRSNYKKNIIGMDTQIKEILSLLCIESQ DVRRIGIWGAVGIGKTAVSEEIFHRISVQYETCVFLKDLHKEVELKGYDAVREELLSKLLEVEPDVVRTSNIKTSFLRNR LQRKRVLVVLDDVKDFRDVETFVGTLIYFGPRSRIIITSRNRHVFVLCKTDHVYEVKPLEFPNSLHLLNPGIFQSGLSPE LYKTLSLELVKFSNGNPQVLQFLSRSSREWKSLSQEIQKSSAIYIPGIFERSCCGLDENEKSIFLDIACFFRKMDKDDVA MLLDGCGFSAHIGFKNLVDKSLLTISHNTVDMLWFLQATGREIVRQESIDRPGDRSRLWNAEDIRDVFLDNTGTSAIEGL FLDMSQLKFDASPNVFDKMCNLRLLKFYFSELIENHGVSLPQGLEYLPTKLRLLHWEYYPISSLPQCFDPKNLIELNMPN SCVKKLWKDKKSLENLKKMRLSYSYQLTKLPRLTSAQNLELLDLEGCKSLVSISHSICYLKKLVSLNLKDCSNLESVPST SDLESLEVLNLSGCSKLENFPEISPNVKELYLGGTVIQEIPSSIKNLVLLEKLDLENSRRLVILPTSICKLKHLETLNLS GCSSLENFPDLSRNMKCLKYLDLSRTAIRELPSSISYLTALEEVRFVGCKSLVRLPDNAWSLRFKVEFRQIDTEKFSKLW NRFGWLKKVHIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |