Names & Information
Knowledge of BnaC09G0288400ZS:
| Gene Name | BnaC09G0288400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g23580D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=1 SV=1 |
| NT seq | Len:2997 nt ATGGGCGGAATTGGTAAAACTACTCTTGCTGATTGCTTGTATGGACGAATGCGAGGCCAGTTCGACGGTAGCTGCTTTCT TACAAACATCCGTGAAAACTCGAGTAGAAGCGGGTTAGAGTCTTTGCTGCAGAAACTCTTCTCCACGTTACTGAATGATA GAGATCTAGAGATCGGAGCTCCTGGAAATGCACATGAGAGGTTTGAGCGTCGGCTTAAGAGCAAGAGGCTGCTTATTGTG CTTGATGATGTGAACGATGAGAAGCAGATAAGGTATCTAATGGGGCACTCCAAATGGTATCAGGGAGGAAGTAGAATCAT CATAACTACTAGAGATAGTAAACTAGTCGAGGCGGTCAAGGGTCGAAAATATGTGCTCCCTAAACTGAATGATAGAGAAG CCCTGAAGCTCTTTTGCTTGAATGCATTTAACGACTCTTGCCCTTTAAAAGAGTTTCAAAGTTTGACAAATATGGTTCTG GATTATGCTAAGGGACACCCTTTGGCGCTTAAGGTGTTAGGGTCTGATCTTTGTGAGAGGGATAATCAGTACTGGGAAGA TAAATTGGATAGGCTGACAAGTAAATCACATGGAGATATCTATGAAGTTCTGGAAACAAGCTATGAGGAGCTTAGCATTG AGCAGAAGAATGTTTTTCTGGATATTGCATGTTTCTTCAGATCAGAGAAAGTGGACTACGTGAAAAGCCTCCTCAACAGT CATGGTGTGGATGTGTCTAGCGTGATAGAGGATCTACTTGACAAATGTTTGATTACTCTTTCTGATGATCGCATCGAGAT GCATGACATGTTGCAGACTATGGGCAAAGAGATTAGCTTAAAAGCAGAAACCATCGCAATAAGAAACTCTAGGTGGCTAT CACCACATGGCACCCCGTTTCAGTCGCATATCAGACTATGGGATAGTGACTATATTTGTTACCTTCTAACTAAGGGCTTG GGAACTGACATGATAAGAGGAATTTTCCTGGACACATCAAAACAAGGAGCAATGCGGCTAAGCGCCAAAGCTTTCAAAGG GATGTGCAATCTCAAGTACCTGAAAATTTATGATTCTCGTTGCTCACGTGGATGTGAAGTGGATTGTAAAATTATCCTAC GTAAGGGGCTTGATTTCCTTTCTGATGAGCTTACATATCTACACTGGTATGGATGCCCACTACAGAGTCTCCTTCTGAAC TTTGACCCCAAGAACCTTGTAGACCTTAAGCTTCCATATAGTGAGTTAGAAGACATTTGGGACCAAGACAAGGATGCTGG AATGCTCAAATGGGTGGATCTCAGTCACTCGTTGAGATTAAGCCGATGTTCAGGTTTGGCTAATGCTCAAAATCTTGAGA GGTTGAATCTAGAAGGATGTACAAGTTTGAAGAAGTTGCCATCATCCATGAAATGTTTGGAGAAGCTTATTTACCTAAAT CTCAGGGAGTGCACAAGTCTCAAGAATCTTCCAAAAGGACTCAAAACTCAATCCTTGGAAACTCTTATTCTCAGTGGCTG CTCCAGTTTCAGGAAATTCCCAATGATCTCAGAAAATGTTGAAGTTTTACTTTTAGATGGCACAGCAATAAAGAGTCTTC CTGAATCCATTGAAAGCTTGAGAAAACTTGCTTTGCTGAATTTGAAAAACTGCAAAAAGCTGAAGCATCTTTCTTCTGAT CTTTATGAGCTGAAATGTCTCCAAGAGCTAACACTCTCAGGATGCTCACAGCTAGAAGTTTTTCCGGAAATCAAGGAAGC CATGGAATCTTTGGAGATTTTACTTCTGGATGATACAGCCATCACTGAGATGCCAAACATCAAGCATCTAAGAAATATCA AGACATTTTCTTTGTGTGGAACAAGCAGTCAAGTTTCTGTTAGTATGTTCTTCTTGCCACCTCCATTGGGCTGCTCTCAG TTAACGGATCTTTACCTCTCACGATGCGGTCTGGACAAACTACCAGATGATATAAGTGGCCTATCCTTGTTGCAGTCTTT ATGCTTAAGCGGAAACAACATTGAGACTCTGCCAGAGAGATTCAACCAGCTTCATAATCTGAAATGGTTTGATCTTAAGT ATTGCAAAATGCTCAAGTCTCTACCTACCCTTCCACAAAACCTTCAATATCTGGATGCTCATGAGTGTGAGTCACTTGAA ACTCTGGCAAATCCATTGACTCCTTTGACAGTAGGAGAGAGGATACATTCTATGTTCATCTTTACCAACTGTCAGAAGCT GAACCAAGATGCTCAAGAGTGTCTGGTAGGTCATGCTCGGGTCAAGAGTCAGTTGATGGCTAATGCTTCTGTGAAACGTT ATTACCGGGGATTTATACCAGAACCTCTGGTTGGAATCTGTTACCCGGCGAATGAAATACCAAGCTGGTTCTGCCACCAA AGACTAGGACATTCACTAGAAATCCCATTGCCTCCTCATTGGTGTGACACTAACTTTGTTGGACTTGCCTTATCTGTAGT TGTCTCATTCAAAGACTATGAAGACCGTGCTAAGCGTTTCTCGGTTAAGTGCTCCGGCAAATTCGATAACCAAGATGGTT CCTTCACAGGATTTGACTTTACGCTGGCCGGCTGGAACGAACCCTGTGGATCGCTTAGCCATGAACCAAGAAAGCTTACT TCTGACCATGTTTTTATGGGATACAACAGTTGCTTCTACGTCAAGAAACTCCATGGAGAGAGTAGCAGCTGCTGTTACAC AAAGGCTTCTTTCGAATTCTATGCAACGGATGATGAAAGGAAGAAGAAGCTCGAGACTTGTGAGGTGGTCAAATGTGGGA TGAGTTTAGTGTATGTTCCTGATGATGATACTTGTATGTTGTTGAAGAAGACGAATCTGGTTCAGTTGAGTACGAAGACC AAACCAAGCTGTTCCTACGGTCTTGATGATGTCAGACTCAAGAGAGGACGATGCCAGGTTGGTGGTGGTGATGAAGAAGC AGATTGTAAGAGAACGAAAGAGAAGATTTTGGTGTGA |
| AA seq | Len:999 aa MGGIGKTTLADCLYGRMRGQFDGSCFLTNIRENSSRSGLESLLQKLFSTLLNDRDLEIGAPGNAHERFERRLKSKRLLIV LDDVNDEKQIRYLMGHSKWYQGGSRIIITTRDSKLVEAVKGRKYVLPKLNDREALKLFCLNAFNDSCPLKEFQSLTNMVL DYAKGHPLALKVLGSDLCERDNQYWEDKLDRLTSKSHGDIYEVLETSYEELSIEQKNVFLDIACFFRSEKVDYVKSLLNS HGVDVSSVIEDLLDKCLITLSDDRIEMHDMLQTMGKEISLKAETIAIRNSRWLSPHGTPFQSHIRLWDSDYICYLLTKGL GTDMIRGIFLDTSKQGAMRLSAKAFKGMCNLKYLKIYDSRCSRGCEVDCKIILRKGLDFLSDELTYLHWYGCPLQSLLLN FDPKNLVDLKLPYSELEDIWDQDKDAGMLKWVDLSHSLRLSRCSGLANAQNLERLNLEGCTSLKKLPSSMKCLEKLIYLN LRECTSLKNLPKGLKTQSLETLILSGCSSFRKFPMISENVEVLLLDGTAIKSLPESIESLRKLALLNLKNCKKLKHLSSD LYELKCLQELTLSGCSQLEVFPEIKEAMESLEILLLDDTAITEMPNIKHLRNIKTFSLCGTSSQVSVSMFFLPPPLGCSQ LTDLYLSRCGLDKLPDDISGLSLLQSLCLSGNNIETLPERFNQLHNLKWFDLKYCKMLKSLPTLPQNLQYLDAHECESLE TLANPLTPLTVGERIHSMFIFTNCQKLNQDAQECLVGHARVKSQLMANASVKRYYRGFIPEPLVGICYPANEIPSWFCHQ RLGHSLEIPLPPHWCDTNFVGLALSVVVSFKDYEDRAKRFSVKCSGKFDNQDGSFTGFDFTLAGWNEPCGSLSHEPRKLT SDHVFMGYNSCFYVKKLHGESSSCCYTKASFEFYATDDERKKKLETCEVVKCGMSLVYVPDDDTCMLLKKTNLVQLSTKT KPSCSYGLDDVRLKRGRCQVGGGDEEADCKRTKEKILV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |