Gene Name | BnaC09G0389700ZY |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaC09g36260D [Brassica napus] |
Best Hit (SwissProt) | Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=3 SV=1 |
NT seq | Len:2205 nt
ATGGCAGACGCAGTGGTTGCATTTGGTTTGCATTTTCTCTGGGAGCTTCTCATTCGAGAATCCAATCGGCTCAAAGCAGT
CCAAGAACAAGCCACCGAGCTGCAAAACGATCTGAGACGGCTAAAATCTTTCGTGAAAGACGCAGAAGCAAGAGCGAGAG
AGTTAGGGATCAAGAAGCATTTAAAGAGAGTTTCTTGCATCACATTTGCTCATCAGAAGCTTAGCTCTCAGATCAGAGGC
ATAAGCAGAAGGATCTCCAAGGTTATAGACAATATGGAGACTGTTGAGAAACTAGTTGGTCATCTCGTGGAAGAGAATGG
AGTTCAAGTTGTTTCTGTTTGCGGTATGGGCGGCATTGGGAAAACAACTCTTGCAAGACAAGTTTTTCATCATGAGAAGG
TCCGGCGTCGTTTCAATGGATTTGCTTGGGTGTTTGTTTCACAAGAGTGTAGGCAAAAGCATAGATGTTTGACTGTGCTT
GATGATGTATGGAGCAGTGCAGCTTGGGAGCTTATAAAGCCAGCTTTTCCACATAGATCAGGTAGCAAGATCTTACTCAC
TTCTCGGAATGAGAGTGTTGGTTTGCATCCAGATCTAAGATGCATTATCTTTAGGCCTAGGTTCCTAACTCATGATGATA
GCTGGGAAGTTTTTCAAAAGATAGCTTTGATTGAGAGAAATGATATAGAGTTTGAGGTTGATGATTTAACGGAAGAGATA
CAACAAATGCTCAAACACTGTGGAGGGTTACCATTAGCTGTAAAAACTCGTGGAGGGTTGTTAGCTACAAAACAAGGGAT
AGTGATGGTGGGAAGTGAAGAGAGTACTATTGTAGATGTCGCAGAGGATTATCTCGAGAAGTTGGTCAAGAGGAGTATGG
TTTTAGTAGGAAAGAGGAACATTGTGACATCAAGAATAGAATCTTGTCGTCTACATGATGTGGTTAGAGAAGTCTGTTTA
TTTAAAGCCAAAGAAGAAAGTTTCATGCAAGTTTTCAATGCTCAGAGCAGTGTCTTGGATGCTACTAGTACTCGAAGAGT
TGCTGTACATTTAGTTGATGATGATGAAAATGAACCTGTTATATTTCAGCAGAGGAAGATTCAAAACCTCAAAGCAAGGG
CCCTTTTGTATATCACTAGAGACTTCCATCCTTGGATATTATCAACCCGGAGTTTTCGAGGTTTAGAATCTCTTAGAGTC
TTGGATCTCTTTGGAGCTCAGTTCAGAAGACCCAAGTTACATAAGAGCATAGGGAAGCTCATCCACTTGAGGTACTTGAG
TTTGAAAGAGACAAACTTGTCTGTATTACCATCTTCTCTAGGAAACCTTGAGTTGTTGGTTTATTTGGATTTAGAGATTT
ATGAGACAATGGTTCACATACCAGATGTCTTAAAGAAGATGAAGAAGCTGAGGTATCTTATGTTACCTGATGAACTCAGC
AATAAAACAAAGCTGGAATTAAGTGGTTTAGTGAAGTTGGAGACTCTCAAGAACTTCTCATTAAAGCACAGTAGCGTCAA
AGATCTAATCAATATGACCAAACTCAGAACTTTGTGGGTCTGTTGTGCCTATGGTAACCTTGCAGAAGGAGTCTTACCTT
TGTCCCTCGGTGCATCATTGAAACACTTGGAGGAGCTAATGTTATACAACAAAAGAAACGGCCAAGAACAAGTCCAACCC
TCCAAAATCGATGCAGGAGCCTTTGTTTCTGGTTTCCAAAGACTTAACCAGCTAAGGTTAGATATAGAGATTGAAACGTT
ACCTAATGAACTTCAGTTCCCTTCCTGTATCACCTCTGTTTCGTTATCCTCTTGTGTCCTACAAGAGGATCCAATGCCAG
TTCTTGAGAAGCTACACAGTTTAAAGATTGTTAGTCTAGAGCTGAATGCATTCACAGGGAGGAAAATGGTCTGCTCGAAA
GCCAGGTTCCCTAAACTGCTTACTCTAGAGTTTTGGATACTCGACAACCTTGAGGAATGGGTTGTAGAAGAAGAGTCCAT
GCCTTGTCTTTGTCATTTGGAGATCAATGACTGCAGAAAGTTGAAGAGTCTTCCTGATGGGTTAAGGTACATAACTAGTT
TAGAGGAGGTGAGAGTTGGATGGATGGAAAATGCATTCAAGGATAAGTTGATCCAAGGTGGAGAAGATTACTACAAGATA
CAGTATGTATCTTATGTTGTGTTTCACAATTGCAGTGACGAATGA |
AA seq | Len:735 aa
MADAVVAFGLHFLWELLIRESNRLKAVQEQATELQNDLRRLKSFVKDAEARARELGIKKHLKRVSCITFAHQKLSSQIRG
ISRRISKVIDNMETVEKLVGHLVEENGVQVVSVCGMGGIGKTTLARQVFHHEKVRRRFNGFAWVFVSQECRQKHRCLTVL
DDVWSSAAWELIKPAFPHRSGSKILLTSRNESVGLHPDLRCIIFRPRFLTHDDSWEVFQKIALIERNDIEFEVDDLTEEI
QQMLKHCGGLPLAVKTRGGLLATKQGIVMVGSEESTIVDVAEDYLEKLVKRSMVLVGKRNIVTSRIESCRLHDVVREVCL
FKAKEESFMQVFNAQSSVLDATSTRRVAVHLVDDDENEPVIFQQRKIQNLKARALLYITRDFHPWILSTRSFRGLESLRV
LDLFGAQFRRPKLHKSIGKLIHLRYLSLKETNLSVLPSSLGNLELLVYLDLEIYETMVHIPDVLKKMKKLRYLMLPDELS
NKTKLELSGLVKLETLKNFSLKHSSVKDLINMTKLRTLWVCCAYGNLAEGVLPLSLGASLKHLEELMLYNKRNGQEQVQP
SKIDAGAFVSGFQRLNQLRLDIEIETLPNELQFPSCITSVSLSSCVLQEDPMPVLEKLHSLKIVSLELNAFTGRKMVCSK
ARFPKLLTLEFWILDNLEEWVVEEESMPCLCHLEINDCRKLKSLPDGLRYITSLEEVRVGWMENAFKDKLIQGGEDYYKI
QYVSYVVFHNCSDE* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0006952 |
Pfam | NB-ARC domain |
KEGG | probable disease resistance RPP8-like protein 2; K19613 leucine-rich repeat protein SHOC2 (A) |
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