Names & Information

Knowledge of BnaC09G0426300ZY:

Gene Name
BnaC09G0426300ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC01g31430D [Brassica napus]
Best Hit (SwissProt)
Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3
NT seq
Len:3270 nt

ATGACTGAACATATAGCTAATGATGTGTTCAATAAACTTATGAAACCATCAGATGATTTTAGTGACTTTGTGGGGATTAA
AATGGTAGGGATTGTGGGGCCTTCAGGGATAGGTAAGAGTACCATAGGAAGAGCTCTTTTTAGTCAACTCTCTAGCCTAT
TCCACCACCATGCTTTTGTCTCTTACAAGAGTATAAAACAGTGGGATGACTATAGCATGAAGTTGTATTTGGATGAACGA
CTTCTGTCGGAAATTTCATGTCAAAAGGGCATAAAGATATCCCACTTAGGTGTAGCAAAACAAATTCTAAACCGAAAGAA
AGTTCTTATCATCGTTGATGATATGGATGATCTTGAAGTAATAAATACATTGGTGGGGCAAACTAGATTGGTTGGATCGG
GTAGCAGAATTATTGTTATAACTCAAGATAGGAAACTTCTTAAGTCTCAAAAGATTGAGCTTATTTATGAGGTGGATTTC
CCATCGTACAATCTTGCTATGCAGATGTTCTGTCGATCTGCGTTTGGGGAAAACTATCCGCCTTACGGTTTTTCTGAACT
TGCAGTTGAAGTTGCCAATCTTTCAGGTTATCTTCCTTTAGGTCTAAATGTCTTGGGTTCGTCTTTGAAAGGGATGACGA
AGGAGGAGTGGGTGGATATGTTACCTAGACTCCGAAATAGTTTGGACGGGAAAATCGAGAAAACACTAAGAGTTAGCTAT
GATGGGTTAGATAGCAAAGATCAAGAGTTGTTTCTTTATATTGCATGCTTATTCAGTGGTCACGAAGTCAATCACATAAA
ATACTTGCTTGGAGACAGTGTCAGAATTGGGCTTAGAGTACTGGCTGACAAGTCCCTCATACATATAACACCATCAGACA
AGATTGAAATGCATAGTTTGTTACAGAAGTTAGGTACAGAAATTGATCGTGCAGAGTCCATCAACAACCCTGGAAAACGT
CGGTTCTTGAGGGAAGCTGAGGATATATGTGATGTACTTACCGATAATATTGGTACAGAGAGTGTTCTAGCCATGTATTT
GAACATGTCAGAAATCAGCGAGCCTTTGTTTATAGATGAAAATGCATTTCGAGGAATGCGTAATCTCAAATTTCTAAATT
TTTACAAAAACGGGTGGTTAAGAGGGACTGGTAAAGGTAAACTGTATTTACCTCGAGGCATTGTTCATTTTCCTCGTAAA
CTCAGATTGCTACATTGGGATGAATATCCATCCAAGTGTATGCCTTTTTGTTTTAAGGCGGAGGGCCTCGTTGAACTCAG
AATGATGAATAGTCAGCTTGAGAAGCTGTGGGAAGGAACTCAGCTTCTTGGAAGCCTCAAGAAGATGAATATGAGTTGTT
CTGCAGATTTGAAAGAGATTCCAGATCTTTCAAAAGCCATAAATCTCGAGGAATTAAATCTTGAGGAATGCACATCTTTG
GTGACACTTCCTTCCTCAATTCGGAATCTCAATAAACTGTGGGTGTTAAACATGTGGGGATGCTCAGGGCTTAAGATTCT
GCCAGCTGATGTCAACTTGAAATATCTTACAATCCTCAATCTCGGAAGATGCTCACAGTTGAGTACGTTTCCTCGGATAA
CAAGGAAAATTTCAGAGCTTTACCTAAATGAAACTGCACTAAAAGGAGATGAAGATAGTTCATGGATTGAGAACATCTGT
CAACTTAGGATACTCAACTGGGATGGTGCTCCATTGAGTTGTATGCCTCCTCACTTCGACCCAGAATATCTCCATAGCTT
TGAAATGAGAGGCGGCAGACTTCAGAAGTTATGGGAAAGAATCAAGTCGCTTCAAAGTCTCTGGATGATGGATTTGTCAG
GATGTGAAAGCCTGGTTGAAATTCCAGATCTTTCAATGGCCACCCAACTTGAGTTTTTGAAACTCAAAAATTGCAAAAGT
TTGGTGATGCTTCCTTCTTCATTTAGGAATCTCAACAGACTGGTGAGCTTGAACATGGACGGATGTACAATGCTTGAGGT
CCTACCAACCGACGTCAACTTGAGAAATCTTCAAGAGCTCGATCTCAGTGGATGCTCAAAGTTGAGAAATTTTCCGCAGA
TTTCAACCAACATTGAATATCTCTATCTAGATGACACCGGGATTGAAGAAATTCCTTCCTGGATTGAGAAGATGTCACAT
CTCAGAAAACTAAGGATGTCTCGATGCAAGAAGTTAAAAAACGTCTCCCTAAATATTTTTAAACTGAAATATCTCGAGGC
AGATTTTTCAGACTGTGGAGGAATCACAACAATGTGTGATCAGTTACCAGGGCCCCACAAGGCTTCCGTTGCTGCTAGAA
TCGGCATTAAATCTTATCTTCTAGGTCTGACTCCTCTCGGGTTCTATAATTGCTTCAATCTGGATAGAGATGCACAGGAA
CTCATAATACAGTCACACTCAAACGGTGCCGTTATACCAGGCGGAGAAGTGCCTATGTATTTCACACATCGAGCTTGTGG
TCGGTCCCTAAGTATCCTTTTGTCTGAGAGCTCTCTTTCTCAAGAATATATGATAGTTAAAACTTGCATCGTGGTTGGAC
CTTCAAGTCACCCCAACGGAGACTTTGGAGTTCGTTGGTGCTTTCGAGGCGAAAAAGGTGTGATTCGTTTTGGAATTAAA
GTGGCGTCGTACGAGATGGATCATCTGGTTTTGATTGGCTTTGATTTACGAATAAAAGAAGTGGATAACCCGGCATCTGA
ATTGAACAACAACAACGTTCTACTGCTTGAGTTTTACAACGCCAATTATGATGAATATTTTGGGGAGTGTTCCTGCAGCA
GCTTTAGCCACACAGAAAATTGTACCCTGGTAAGGATAAAAGGATGCGGTGCACGAATCATTCATATCTCAGAAATAGAC
TACCAAGACAGTGACGAAAAAAGTGCTGAAGAGAATGATGAAGAAAGTGATGAAGAGAGTAATAGAAGCAAGAAGAAGAT
GCGGATGACAGTTCCAACATCTCAAGAACATTCCAACTCTCTTTATATCCAAACTGTTGTGAATTCCAGACTACTGGCTC
AGAATTTGGAGCTTTCCTTGGGGCTGGCTGGAGCATATGGTGAGGTATCTTCTGGAAGCAAAGTGTCCTCGCCTTCAAGG
AACTTCCATGATGATGGAGCAGCTTCTTTTGACCCGTGTCTTCGCAGAGAATCTTTGCATTTTGAACCGATGATAATCGA
GCAACAAGACAGAGGTCTATCCAACGAGGATCCTTCATTTTCTCCACAGCTTATAGACTTTTTTACTTAG
AA seq
Len:1090 aa

MTEHIANDVFNKLMKPSDDFSDFVGIKMVGIVGPSGIGKSTIGRALFSQLSSLFHHHAFVSYKSIKQWDDYSMKLYLDER
LLSEISCQKGIKISHLGVAKQILNRKKVLIIVDDMDDLEVINTLVGQTRLVGSGSRIIVITQDRKLLKSQKIELIYEVDF
PSYNLAMQMFCRSAFGENYPPYGFSELAVEVANLSGYLPLGLNVLGSSLKGMTKEEWVDMLPRLRNSLDGKIEKTLRVSY
DGLDSKDQELFLYIACLFSGHEVNHIKYLLGDSVRIGLRVLADKSLIHITPSDKIEMHSLLQKLGTEIDRAESINNPGKR
RFLREAEDICDVLTDNIGTESVLAMYLNMSEISEPLFIDENAFRGMRNLKFLNFYKNGWLRGTGKGKLYLPRGIVHFPRK
LRLLHWDEYPSKCMPFCFKAEGLVELRMMNSQLEKLWEGTQLLGSLKKMNMSCSADLKEIPDLSKAINLEELNLEECTSL
VTLPSSIRNLNKLWVLNMWGCSGLKILPADVNLKYLTILNLGRCSQLSTFPRITRKISELYLNETALKGDEDSSWIENIC
QLRILNWDGAPLSCMPPHFDPEYLHSFEMRGGRLQKLWERIKSLQSLWMMDLSGCESLVEIPDLSMATQLEFLKLKNCKS
LVMLPSSFRNLNRLVSLNMDGCTMLEVLPTDVNLRNLQELDLSGCSKLRNFPQISTNIEYLYLDDTGIEEIPSWIEKMSH
LRKLRMSRCKKLKNVSLNIFKLKYLEADFSDCGGITTMCDQLPGPHKASVAARIGIKSYLLGLTPLGFYNCFNLDRDAQE
LIIQSHSNGAVIPGGEVPMYFTHRACGRSLSILLSESSLSQEYMIVKTCIVVGPSSHPNGDFGVRWCFRGEKGVIRFGIK
VASYEMDHLVLIGFDLRIKEVDNPASELNNNNVLLLEFYNANYDEYFGECSCSSFSHTENCTLVRIKGCGARIIHISEID
YQDSDEKSAEENDEESDEESNRSKKKMRMTVPTSQEHSNSLYIQTVVNSRLLAQNLELSLGLAGAYGEVSSGSKVSSPSR
NFHDDGAASFDPCLRRESLHFEPMIIEQQDRGLSNEDPSFSPQLIDFFT*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0000166
Pfam
Leucine Rich Repeat
KEGG
disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A)