Names & Information
Knowledge of BnaC09G0431200GG:
| Gene Name | BnaC09G0431200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X2 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:4008 nt ATGGAGTGGAGAGAAAAGGATCAACAAAAAAAAGTGATAACCATTTTCTACGGAGTGGATCCATCTGATGTGAGGAAGCA GACGGGAGATTTCGGAAAGGGATTTGACAGAACCTGTGTGGGAAAAGAAGAAAAGATGAAGAAGGAATGGAGACGAGCTT TGGTGGATGTAGCCAATATAGCTGGTTACGACTCTAGCAGATGGCACAGTGAAGCTGATTTGATCAACAAAATTGCTTTA GATCTTATGGATGAGTTGGGTTTTACACCATCAAAAGATTTTGATGACTTTGTTGGCATGGAAGCTCGTATCAAGGAGAT AATGTCGTTGTTGAGCAAACATTCAGATGCTAAAGTTAAGTTCCTAGGGATCGTGGGTCCTACTGGGATTGGTAAGACGA GCACTGCCAGAGCTTTGTACGACCGGTTCTCTCGTGACTTTGAGTTCAGCACGTTTATTGAGGATATCAAGGGAAGTAAA GAGATGCCTTCTCTCGGTGGCTCCCATCATAAGTATCAGTTGGATTGTCAGAAAGAGTTACTGTCTCGGCTTTTCAACCA AAAGGATAGTAAGGTTGGTCACTTGGGAGTGGCTGAACAAAGGCTGAGAGACAAAAAGGTGTTGATTGTTCTTGATGAAA TGGACTGCTTGTTGAAACTAGAGGCAATGGCAAAAAAGGCTGATTGGTTTGGTCCCGGTAGTGTTATTATCATTACAACC GAAGATAGAAACCTTCTCAAGGCACAAGGCATCAAATGTATTTACGATATTAAACTTCCAGACGAAGTTGAGGCCTTTCA GATCTTCTGCCAATATGCTTTCGGTCAAAAGTCTATAGATTATGGTCCTAGCATTATCAGAGATTTGCATACCCGATTCT TTTTTGATTTTCAGTTCAGAGCTTTTATTGAGTATGTCAGTGGAAGTAATGAGATGACTTCTCTCGGTGACTCCGATTAT TGTAAATTTCAGTCGGCTTATCAGAAAACTCAATACGTTGATTTTTATGAGTTTGCTTGGGGAATTACTGGACTTGCTGG TCGTCTCCCTCTGGCCCTGAGAGTGTTAGGATCGTCTCTACGAGGAAAATCCAGGGACGAGTGGATAAGTGCAGTACCAA GGCTCAAGTCTAGCCTTGACAAAGGAATTGAATCAATTCTAATATTTGGCTACAACGGCTTAAGTGATGATAAAGACAGA GCTCTTTTTCTGTATATTGCATGTCTCTTTGTTGGTTTCACGGTTGATCGCGTTAAACGTTTTCTTGAAGATTGTGATTT GGATGTCGACCATGGGCTTCAGAACTTAGAGCAGAAAAGTCTCATATCCACAGAAAACGGATACGTAAGGATGCACAAAT TACTGCAACAAATGGGGAGAGATATTGTCAAGAAAAAGACGAAGGAAATTGGAAAGCGACAGTTCTTGATGGATACGAAG GATATTTCTGAATTACTTGAAGATGAAGATACTGGTACTAGAAAAATTCTGGGCATTAAGTTAGAAGAATGGGGAGAGGT GGATATCCAAATAAGTAAAAGTGCCTTCCAAGGGATGAAGAATCTACAGTTTCTAAGTGTCTACTCTGATAACGTGCGCA TACCCGAAGAAGGCCTCAGCTGTCTTCCCGACAAACTCAGACTTCTAGAGTGGCATAACTATCCATTGACTTTTTTGCCT TCCAAGTTCTCTTGCAAGTTTCTTGTCGAACTTATCATGACAGAAAGCAAACTTGAGAAGCTTTGGGATGGAATCAAGCC TCTCCAGCGCCTCAAGCGGATGGTTTTGAGTTGGTCTCGGTGGTTGAAAGAGATTCCAGATCTCTCAAATGCAACTAGTC TCGAGGAACTAAATCTCCACGAGTGCAAAGGTTTGTTAGAGCTCACAAGCACTATTGGCTATGCCACTAAGCTTAAAAGG TGCATACTTAGCGGTTGCTGTCTTTTGAAGGAGCTCCCCTCTTCTATGGGTAGTTTAATCAATCTCGAGGAACTGAACCT CTCTGAGAGCACGGGTTTGAAAGAACTCACTGGTTGCTTGAATCTAGAAATACTCAGTGGTTGCTCGAGTTTGAAAAGAC TCGATCTGAGAGGGACTGCGATACGGGAAGTGCCATTATCAATCAAATCTTATTTGGCTCATATTAATAAATTGGATATG TCTGGGTGTAGAAACCTCAAGGAGTTCCCAAATGTTCCTGCCAGCATTGAAGTCTTGTTGTTGTGCAAGACAAGTATAGA GGAAATTCCTCCATGGATTGAGAATCTGTCTCATCTGTGCATACTAGTTATGTATGGATGCGAGGAGCTGAAAAAGATAT CTCCAAATATTTCCAAGTTGGAGAATCTCGAGTTTCTTGGTCTGCGTAAGAGTGGCGAAAGTGAGCATCATAATTGGGGT GACGATGAATTTGAAGATTTTCCTGACTTATTTGAAGCAGTAATCGAGCGGGGCCCTAACAGGTGGCCAGATTTGATATT AGCATCAGACTTGGAGGTTAACTACATTTTATCGAGATGTCTACCCGCAAAGGCGCTATCATTATGTTTACGGAGTTATG GTCTCAACACTATTCCAGATTGCATCACACGTCTCTCGGGGCTCATTAAGCTTGACGTCAAAGGATTCAGATTGCTCGAA GCACTTCCACCGCTTCCAGACTCCCTTCTGTCTCTAGATGCAGAAGACTGTGTATGCTTAGAGAGAATAGATTCTTCTTT TCATAATCCAAATATTTGCATAAACTTTGCTGGCTGTTATGGCCTGAGTCGAAACGCGAGAAGGCTCATCCACACATCAG ACTGCAAATATGTGTTATTACCGGGTGAAGAAGTGCCCGGACACTTCCCTCACCAAGCTGACTCAGGTTCCCTGACAATC AATCTGACTCCAAGACCTCTTCCTTCATCCTTGAGATTCAAAGCTTGCATCTTGCTGTCAATATGCGATGAGGGTTTCAT TATGCACAAGGATGGTGTGTCTTGTAACGTTATTGGTAAACAGAATGGCCTCACTATCCAATATGGATCAAATGAGCACC ATATGCCGTTTAGATTTGAAGAAGTGGAAGATCATCTGTATATATTTGAAGATTCTTTTAATCTAAACCAAGATTGCCCT GAAGCTGGAGAAGCCACCTTGAGCAAGCTTCTGTTTGAGTTCCTAGTCCATGGTAACATCTGGAAGGTGAAAGGCTGCGG TGTACGACTTTTGTTCCCTGATCCTATTATTGACATAAATGCAGCCAATGATGATGATGATGATGATGATGATGATGATG ATGATGATGATGGGAACAAAGTTGAAAGTGATCATGATGATGGTGACGAAGTTGAAAGTGATGATGATGAATTTATGCTC GTACCTGGTGTAGAAGTGCCTGCACACTTCACTTACCAAGCTACTTCAGGTTTCCTAAAGATCAATCAGACTCCAGGACC TCTTCCTCCATCCCTTAGATTCAAAGCTTGCATCTTGCTGTCAAGAGGAAATATTAATCTCGTGGATGATGAAGACATTG TATCTTGGCGCCTTAATTATTTATTTGATGACTTTGATGACCATGGAGAGGAGAAGAAGTTATCCATGCGTGTGTCTTGT AGGTTTAGGGGTAAACAAAATGGTCTCACTGTCCAATATGGATCAAACCAGCGCGACATGCCTTATATATGTGGATGGGA GGAACGTCTGTATACATTTGAAGATTCTTTCTGTCTAGACCAGGATTTCCCTGAAGCTGAAGAAGCTACTTTCAGCGAGC TTGTGTTTCATTTCAAAGTCTTTTATAAGAAATGGAAAGTGAAAGCTTGTGGTGTACAGCTTTTGGAGGACGAAGAAGAA TCTGAACGTGATGAGGATGAGGATGATAAAGCTGGCGATGGTGATAATGATGGGGTTGAGGAGGATATAAAGGATGATGT AGATAAAACTCAAGAAGGGGACAAATCTAGACGTGATGATGATGCAGAGACAAGGAGCAAGAAACGAATGAGGTTCAGCC TTCTGTAG |
| AA seq | Len:1336 aa MEWREKDQQKKVITIFYGVDPSDVRKQTGDFGKGFDRTCVGKEEKMKKEWRRALVDVANIAGYDSSRWHSEADLINKIAL DLMDELGFTPSKDFDDFVGMEARIKEIMSLLSKHSDAKVKFLGIVGPTGIGKTSTARALYDRFSRDFEFSTFIEDIKGSK EMPSLGGSHHKYQLDCQKELLSRLFNQKDSKVGHLGVAEQRLRDKKVLIVLDEMDCLLKLEAMAKKADWFGPGSVIIITT EDRNLLKAQGIKCIYDIKLPDEVEAFQIFCQYAFGQKSIDYGPSIIRDLHTRFFFDFQFRAFIEYVSGSNEMTSLGDSDY CKFQSAYQKTQYVDFYEFAWGITGLAGRLPLALRVLGSSLRGKSRDEWISAVPRLKSSLDKGIESILIFGYNGLSDDKDR ALFLYIACLFVGFTVDRVKRFLEDCDLDVDHGLQNLEQKSLISTENGYVRMHKLLQQMGRDIVKKKTKEIGKRQFLMDTK DISELLEDEDTGTRKILGIKLEEWGEVDIQISKSAFQGMKNLQFLSVYSDNVRIPEEGLSCLPDKLRLLEWHNYPLTFLP SKFSCKFLVELIMTESKLEKLWDGIKPLQRLKRMVLSWSRWLKEIPDLSNATSLEELNLHECKGLLELTSTIGYATKLKR CILSGCCLLKELPSSMGSLINLEELNLSESTGLKELTGCLNLEILSGCSSLKRLDLRGTAIREVPLSIKSYLAHINKLDM SGCRNLKEFPNVPASIEVLLLCKTSIEEIPPWIENLSHLCILVMYGCEELKKISPNISKLENLEFLGLRKSGESEHHNWG DDEFEDFPDLFEAVIERGPNRWPDLILASDLEVNYILSRCLPAKALSLCLRSYGLNTIPDCITRLSGLIKLDVKGFRLLE ALPPLPDSLLSLDAEDCVCLERIDSSFHNPNICINFAGCYGLSRNARRLIHTSDCKYVLLPGEEVPGHFPHQADSGSLTI NLTPRPLPSSLRFKACILLSICDEGFIMHKDGVSCNVIGKQNGLTIQYGSNEHHMPFRFEEVEDHLYIFEDSFNLNQDCP EAGEATLSKLLFEFLVHGNIWKVKGCGVRLLFPDPIIDINAANDDDDDDDDDDDDDDGNKVESDHDDGDEVESDDDEFML VPGVEVPAHFTYQATSGFLKINQTPGPLPPSLRFKACILLSRGNINLVDDEDIVSWRLNYLFDDFDDHGEEKKLSMRVSC RFRGKQNGLTVQYGSNQRDMPYICGWEERLYTFEDSFCLDQDFPEAEEATFSELVFHFKVFYKKWKVKACGVQLLEDEEE SERDEDEDDKAGDGDNDGVEEDIKDDVDKTQEGDKSRRDDDAETRSKKRMRFSLL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |