Names & Information
Knowledge of BnaC09G0432800ZY:
| Gene Name | BnaC09G0432800ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X2 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3543 nt ATGGAGTGGAGAGAAAAGGATCAACAAAAAAAAGTGATAACCATTTTCTACGGAGTGGATCCATCTGATGTGAGGAAGCA GACGGGAGATTTCGGAAAGGGATTTGACAGAACCTGTGTGGGAAAAGAAGAAAAGATGAAGAAGGAATGGAGACGAGCTT TGGTGGATGTAGCCAATATAGCTGGTTACGACTCTAGCAGATGGCACAGTGAAGCTGATTTGATCAACAAAATTGCTTTA GATCTTATGGATGAGTTGGGTTTTACACCATCAAAAGATTTTGATGACTTTGTTGGCATGGAAGCTCGTATCAAGGAGAT AATGTCGTTGTTGAGCAAACATTCAGATGCTAAAGTTAAGTTCCTAGGGATCGTGGGTCCTACTGGGATTGGTAAGACGA GCACTGCCAGAGCTTTGTACGACCGGTTCTCTCGTGACTTTGAGTTCAGCACGTTTATTGAGGATATCAAGGGAAGTAAA GAGATGCCTTCTCTCGGTGGCTCCCATCATAAGTATCAGTTGGATTGTCAGAAAGAGTTACTGTCTCGGCTTTTCAACCA AAAGGATAGTAAGGTTGGTCACTTGGGAGTGGCTGAACAAAGGCTGAGAGGCAAAAAAGTGTTGATTGTTCTTGATGAAA TGGATTGCTTGTTGAAACTAGAGGCAATGGCAAAAAAGGCTGATTGGTTTGGTCCCGGTAGTGTTATTATCATTACAACC GAAGATAGAAACCTTCTCAAGGCACAAGGCATCAAATGTATTTACGATATAAAACTTCCAGACGAAGTTGAGGCCTTTCA GATCTTCTGCCAATATGCTTTCGGTCAAAAGTCTATAGATTATGAGCAGAAAAGTCTCATATCCACAGAAAACGGATACG TAAGGATGCACAAATTACTGCAACAAATGGGGAGAGATATTGTCAAGAAAAAGACGAAGGAAATTGGAAAGCGACAGTTC TTGATGGATACGAAGGATATTTCTGAATTACTTGAAGATGAAGATACTGGTACTAGAAAAATTCTGGGCATTAAGTTAGA AGAATGGGGAGAGGTGGATATCCAAATAAGTAAAAGTGCCTTCCAAGGGATGAAGAATCTACAGTTTCTAAGTGTCTACT CTGATAACGTGCGCATACCCGAAGAAGGCCTCAGCTGTCTTCCCGACAAACTCAGACTTCTAGAGTGGCATAACTATCCA TTGACTTTTTTGCCTTCCAAGTTCTCTTGCAAGTTTCTTGTCGAACTTATCATGACAGAAAGCAAACTTGAGAAGCTTTG GGATGGAATCAAGCCTCTCCAGCGCCTCAAGCGGATGGTTTTGAGTTGGTCTCGGTGGTTGAAAGAGATTCCAGATCTCT CAAATGCAACTAGTCTCGAGGAACTAAATCTCCACGAGTGCAAAGGTTTGTTAGAGCTCACAAGCACTATTGGCTATGCC ACTAAGCTTAAAAGGTGCATACTTAGCGGTTGCTGTCTTTTGAAGGAGCTCCCCTCTTCTATGGGTAGTTTAATCAATCT CGAGGAACTGAACCTCTCTGAGAGCACGGGTTTGAAAGAACTCACTGGTTGCTTGAATCTAGAAATACTCAGTGGTTGCT CGAGTTTGAAAAGACTCGATCTGAGAGGGACTGCGATACGGGAAGTGCCATTATCAATCAAATCTTATTTGGCTCATATT AATAAATTGGATATGTCTGGGTGTAGAAACCTCAAGGAGTTCCCAAATGTTCCTGCCAGCATTGAAGTCTTGTTGTTGTG CAAGACAAGTATAGAGGAAATTCCTCCATGGATTGAGAATCTGTCTCATCTGTGCATACTAGTTATGTATGGATGCGAGG AGCTGAAAAAGATATCTCCAAATATTTCCAAGTTGGAGAATCTCGAGTTTCTTGGTCTGCGTAAGAGTGGCGAAAGTGAG CATCATAATTGGGGTGACGATGAATTTGAAGATTTTCCTGACTTATTTGAAGCAGTAATCGAGCGGGGCCCTAACAGGTG GCCAGATTTGATATTAGCATCAGACTTGGAGGTTAACTACATTTTATCGAGATGTCTACCCGCAAAGGCGCTATCATTAT GTTTACGGAGTTATGGTCTCAACACTATTCCAGATTGCATCACACGTCTCTCGGGGCTCATTAAGCTTGACGTCAAAGGA TTCAGATTGCTCGAAGCACTTCCACCGCTTCCAGACTCCCTTCTGTCTCTAGATGCAGAAGACTGTGTATGCTTAGAGAG AATAGATTCTTCTTTTCATAATCCAAATATTTGCATAAACTTTGCTGGCTGTTATGGCCTGAGTCGAAACGCGAGAAGGC TCATCCACACATCAGACTGCAAATATGTGTTATTACCGGGTGAAGAAGTGCCCGGACACTTCCCTCACCAAGCTGACTCA GGTTCCCTGACAATCAATCTGACTCCAAGACCTCTTCCTTCATCCTTGAGATTCAAAGCTTGCATCTTGCTGTCAATATG CGATGAGGGTTTCATTATGCACAAGGATGGTGTGTCTTGTAACGTTATTGGTAAACAGAATGGCCTCACTATCCAATATG GATCAAATGAGCACCATATGCCGTTTAGATTTGAAGAAGTGGAAGATCATCTGTATATATTTGAAGATTCTTTTAATCTA AACCAAGATTGCCCTGAAGCTGGAGAAGCCACCTTGAGCAAGCTTCTGTTTGAGTTCCTAGTCCATGGTAACATCTGGAA GGTGAAAGGCTGCGGTGTACGACTTTTGTTCCCTGATCCTATTATTGACATAAATGCAGCCAATGATGATGATGATGATG ATGATGATGATGATGATGATGATGATGGGAACAAAGTTGAAAGTGATCATGATGATGGTGACGAAGTTGAAAGTGATGAT GATGAATTTATGCTCGTACCTGGTGTAGAAGTGCCTGCACACTTCACTTACCAAGCTACTTCAGGTTTCCTAAAGATCAA TCAGACTCCAGGACCTCTTCCTCCATCCCTTAGATTCAAAGCTTGCATCTTGCTGTCAAGAGGAAATATTAATCTCGTGG ATGATGAAGACATTGTATCTTGGCGCCTTAATTATTTATTTGATGACTTTGATGACCATGGAGAGGAGAAGAAGTTATCC ATGCGTGTGTCTTGTAGGTTTAGGGGTAAACAAAATGGTCTCACTGTCCAATATGGATCAAACCAGCGCGACATGCCTTA TATATGTGGATGGGAGGAACGTCTGTATACATTTGAAGATTCTTTCTGTCTAGACCAGGATTTCCCTGAAGCTGAAGAAG CTACTTTCAGCGAGCTTGTGTTTCATTTCAAAGTCTTTTATAAGAAATGGAAAGTGAAAGCTTGTGGTGTACAGCTTTTG GAGGACGAAGAAGAATCTGAACGTGATGAGGATGAGGATGATAAAGCTGGCGATGGTGATAATGATGGGGTTGAGGAGGA TATAAAGGATGATGTAGATAAAACTCAAGAAGGGGACAAATCTAGACGTGATGATGATGCAGAGACAAGGAGCAAGAAAC GAATGAGGTTCAGCCTTCTGTAG |
| AA seq | Len:1181 aa MEWREKDQQKKVITIFYGVDPSDVRKQTGDFGKGFDRTCVGKEEKMKKEWRRALVDVANIAGYDSSRWHSEADLINKIAL DLMDELGFTPSKDFDDFVGMEARIKEIMSLLSKHSDAKVKFLGIVGPTGIGKTSTARALYDRFSRDFEFSTFIEDIKGSK EMPSLGGSHHKYQLDCQKELLSRLFNQKDSKVGHLGVAEQRLRGKKVLIVLDEMDCLLKLEAMAKKADWFGPGSVIIITT EDRNLLKAQGIKCIYDIKLPDEVEAFQIFCQYAFGQKSIDYEQKSLISTENGYVRMHKLLQQMGRDIVKKKTKEIGKRQF LMDTKDISELLEDEDTGTRKILGIKLEEWGEVDIQISKSAFQGMKNLQFLSVYSDNVRIPEEGLSCLPDKLRLLEWHNYP LTFLPSKFSCKFLVELIMTESKLEKLWDGIKPLQRLKRMVLSWSRWLKEIPDLSNATSLEELNLHECKGLLELTSTIGYA TKLKRCILSGCCLLKELPSSMGSLINLEELNLSESTGLKELTGCLNLEILSGCSSLKRLDLRGTAIREVPLSIKSYLAHI NKLDMSGCRNLKEFPNVPASIEVLLLCKTSIEEIPPWIENLSHLCILVMYGCEELKKISPNISKLENLEFLGLRKSGESE HHNWGDDEFEDFPDLFEAVIERGPNRWPDLILASDLEVNYILSRCLPAKALSLCLRSYGLNTIPDCITRLSGLIKLDVKG FRLLEALPPLPDSLLSLDAEDCVCLERIDSSFHNPNICINFAGCYGLSRNARRLIHTSDCKYVLLPGEEVPGHFPHQADS GSLTINLTPRPLPSSLRFKACILLSICDEGFIMHKDGVSCNVIGKQNGLTIQYGSNEHHMPFRFEEVEDHLYIFEDSFNL NQDCPEAGEATLSKLLFEFLVHGNIWKVKGCGVRLLFPDPIIDINAANDDDDDDDDDDDDDDGNKVESDHDDGDEVESDD DEFMLVPGVEVPAHFTYQATSGFLKINQTPGPLPPSLRFKACILLSRGNINLVDDEDIVSWRLNYLFDDFDDHGEEKKLS MRVSCRFRGKQNGLTVQYGSNQRDMPYICGWEERLYTFEDSFCLDQDFPEAEEATFSELVFHFKVFYKKWKVKACGVQLL EDEEESERDEDEDDKAGDGDNDGVEEDIKDDVDKTQEGDKSRRDDDAETRSKKRMRFSLL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |