Names & Information

Knowledge of BnaC09G0436200ZY:

Gene Name
BnaC09G0436200ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g40030D [Brassica napus]
Best Hit (SwissProt)
Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1
NT seq
Len:3360 nt

ATGGTGAGTTCTTCCTCTTCCATGGTGAAAGCTGAAGCTGAGACACCCCAAGAGCAAGTGTTTATTAACTTCCGTGGAGT
TGAACTGCGCTACAACTTCGTCAGCCATCTCACCAATAACTTAAAAAGGAATGGGATCAATGCCTTCATAGACACCGATG
AGGATATGGGCAAAGAGTTGAATGTTCTGCTAAAGAGAATCGAAGAGTCAAAGATCGCACTCGCAATATTCTCGCCAAGG
TATACGGAGTCGGATTGGTGTTTGAAAGAGCTTGCGAAAATGAAGGAAAGAAAGGACCAAAACATGCTCGAGGTGATTCC
AATCTTCTACAAGGTGAAACCTGCCACTGTTAAAAGACAGATGGGCGAGTTCGGCGATAAGTTCAGGAATCTGGTGCGGT
CTATAGACAAGGAGACAAGCAACAAATGGAGTGAAGCTTTGGAAGATGTCCCTCTCTTAATGGGTTTCGAGGTGGACGAG
AAAAGACTCATCAAGAGAGTCGTCAAGGAGGTGAAGAAAGTGCTGATGAAAACCCTTGCACATGCTTCTCCCAATCCCCA
AAAATGTATTGCGCCGTCGTCGCCACCACAAAGAAACCAGAAAAGCCATGAAAGCTCTTGGGGAATCGAACAACGACTTA
AGCAACTAGAAGAAAAGTTAAGCCACCCTCGCTACAAGGAAACAACTCGTATCATTGGTGTTGTTGGGATGCCCGGCATA
GCTTATAAAGATCAACTACTCAAGACCAAAGTCTTGGTTGTTCTCGACAATGTCAGTAACAAGGAACAAATTGATGTTCT
TCTTGGCGAACGCGACTGGATTGCCAAGGGAAGCAAGATTGTCATTTCAACAACCGATATATCACTGACACACAATTTGG
TCAGTGATATATACGAGGTTCCTCCACTAAGCGACAGAGACGCCTTACAACACTTTATTCATTATGCATTTGATGATCAA
GAAGACATTGCACTCAGGCTAGGAATTTTCTCCAAGTTGTTGAAAGATTTCGTGCATTATACAAAAGGAAATCCACTAGC
TCTCAGGATATTGGGTAGAGAGCTTTCGGGGAAAGATGAGACTATCTGGGAATCAAAACTAGCTGCACTGACTCAGCATC
ATAATAGCCCACCAGGAAAAAACACCAGCATGATGCTTCAAAGGGTATGGAAAGGTACTTATGATGGGCTGAGTCAAAAT
CAAAAAGATACGCTCCTTGACATAGCTTGCTTCAGGTCGCTAGATGAGAATTACGTTGCCAGTTTATTGGATGCACATGG
TCCATGTTCCTCTGATGCTAGGAATGTCGACATAGCAGATCTCGTGAACAAGTTTATGATTAATATTTCTTCTGGCAAAG
TAGAGATGCACGATACGCTCTACATGCTCTCCAAAGAACTTGGTCAAGACGCTTCTGCTCTCGACGGGAAGGGGCGACGA
AGATTGTGGCACCATCACACGATAATTGATGTTATAGACAAAAATAAGGGAGCTTCTAAATTGAGATCTATCCTCCTTGA
CTTGTCTGAGGTAAAGAGAAAAACAAGCTTCCAGAGCCAAGCTTTTGCCGGGATGAGTGATCTACGATATCTCAAAATCT
ACAGCTCTAAGTGTCCTCAAGAATGTGATCGTGACAATAAACTAAACTTCCCAGACGGACTCCAGCTACCATTGAGTGAG
GTTAGATGTTTCCATTGGTTGAAATTCCCATTGAAAGAAGTTCCAGAAGATTTCAACCCGGAGAATTTGGTTGATCTTAA
GCTTCCTTACAGCGAGATTGAACGAGTCTGGGAAGATAACAAGGACGCATCAAAACTAAGATGGGTCGATTTGAACCATT
CACGGAAGTTGAGCATTTTGTCGGGTTTAGGAAAGGCTCAAAGTATTGAATACCTGAATCTTGAAGGTTGTACGGCGTTG
ACAAGGTTGCATGAGAATATGGAGGATATGAAGTGTCTTGTTTTCTTGAACCTGAGAGGATGCACGAGTCTCAAGTCTCT
TCCATTGATTAAATTAATCTCTTTGAAAACGCTCATCCTCAGCGGCTGCTCGAAGTTTAAAGCATTTCACGTTATTTCTG
ATAAGCTTGAAGCTCTCTACTTGGACGGCACAAAGGTAAACGAACTTCCTGTTGAAATTGGGGTCCTCCAAAGACTTGTC
TTACTGAACATGAAAGACTGCAAGAAGCTGAAAAAACTCCCTTGCAGTCTTCATGACCTGGAAGCTCTAGAACAACTTAT
ACTCTCGGGTTGTTCAAAGCTCAAAGAGTTTCCAGAAACTGGAGGACACGTGAGCAGTTTAGAGATTCTGCTTCTGGATG
GGACGGCCATAAAGGACATACCAGATATTTTCTCGGTGCGGCGTTTATGCTTAAGCTGGAATGTAAAGATCAGCCGCCTT
CCCGACCTAATCAGTCGATTTTTACGACTGCAATCGCTTGATTTGAAGCACTGTAAGAATCTTACACATGTTCCTCAGCT
TCCACCAAATCTTCAGTGCTTAGATGTACGTGGCTGCAGCTCACTGAAAACAATTGCAAAACCACTGGTATGTTCTGTGC
CGACGGGTCAGATCCATTCCAAGTTCATTTTCACAAACTGCAATGAACTGGAAAAAACTGCAAAGGAGGAGATAGCAGCC
TATGCTGAAAGGAAGTGTCAATTGGTATCAAGTGCACTTAAGCGCTGCAATGGGGGTTGTGTTCCTGATATTGTGTTTGA
CACTAGCTTTCCTGGATGTGAAATGCCTTCATGGTTTTGTCATGAAGCAATTGGATCTCTGGTGGAGTTTGAATTGCCCC
CACATTGGGATCACAACAGGCTTTCAGGGATAGTCCTATGTGTTGTTGTCTCTTTTAAGAACTGTCAAGATCATGCCGAC
ATGACAGTCAAATTCACTGGAGAGGGCTCTTGCACCAGCATTACTTGGAAGGTTGGAAGTTTGATTGAACAAGACAATGA
GGTAGACAGAGTTGAGTCAGATCATGTATTAATCGGCTACACCAACTGTCTAAACTTCAGAAAACTTCTTCAATGTGATG
ACCCGCGTAAATGTGCTTCGACAAAGGCATCCCTTGAGTTTAGCGTGACAACTGGTACTGGTGGGGAAGCGAGCTTTGAA
GTTTTGAGATCTGGTTTCAGTTTTGTGTTTGAACCTGAAGAGATCAAAGTTCCACCCACAAGAAGTGAACAATTCAAAGG
TAAAACAAAAAATAACGGAACTCTAGATAGTAATGGTAGTTTCAAGGATCAACCAAAAGGACATGAATCTCCAAAGGGCC
ACTTTGAGTCTTGCACCGGAAGTTGCACCACATGTGAAGCACATTGTCACGGACTGATTTCTGAGGACGTACGGCCTTAG
AA seq
Len:1120 aa

MVSSSSSMVKAEAETPQEQVFINFRGVELRYNFVSHLTNNLKRNGINAFIDTDEDMGKELNVLLKRIEESKIALAIFSPR
YTESDWCLKELAKMKERKDQNMLEVIPIFYKVKPATVKRQMGEFGDKFRNLVRSIDKETSNKWSEALEDVPLLMGFEVDE
KRLIKRVVKEVKKVLMKTLAHASPNPQKCIAPSSPPQRNQKSHESSWGIEQRLKQLEEKLSHPRYKETTRIIGVVGMPGI
AYKDQLLKTKVLVVLDNVSNKEQIDVLLGERDWIAKGSKIVISTTDISLTHNLVSDIYEVPPLSDRDALQHFIHYAFDDQ
EDIALRLGIFSKLLKDFVHYTKGNPLALRILGRELSGKDETIWESKLAALTQHHNSPPGKNTSMMLQRVWKGTYDGLSQN
QKDTLLDIACFRSLDENYVASLLDAHGPCSSDARNVDIADLVNKFMINISSGKVEMHDTLYMLSKELGQDASALDGKGRR
RLWHHHTIIDVIDKNKGASKLRSILLDLSEVKRKTSFQSQAFAGMSDLRYLKIYSSKCPQECDRDNKLNFPDGLQLPLSE
VRCFHWLKFPLKEVPEDFNPENLVDLKLPYSEIERVWEDNKDASKLRWVDLNHSRKLSILSGLGKAQSIEYLNLEGCTAL
TRLHENMEDMKCLVFLNLRGCTSLKSLPLIKLISLKTLILSGCSKFKAFHVISDKLEALYLDGTKVNELPVEIGVLQRLV
LLNMKDCKKLKKLPCSLHDLEALEQLILSGCSKLKEFPETGGHVSSLEILLLDGTAIKDIPDIFSVRRLCLSWNVKISRL
PDLISRFLRLQSLDLKHCKNLTHVPQLPPNLQCLDVRGCSSLKTIAKPLVCSVPTGQIHSKFIFTNCNELEKTAKEEIAA
YAERKCQLVSSALKRCNGGCVPDIVFDTSFPGCEMPSWFCHEAIGSLVEFELPPHWDHNRLSGIVLCVVVSFKNCQDHAD
MTVKFTGEGSCTSITWKVGSLIEQDNEVDRVESDHVLIGYTNCLNFRKLLQCDDPRKCASTKASLEFSVTTGTGGEASFE
VLRSGFSFVFEPEEIKVPPTRSEQFKGKTKNNGTLDSNGSFKDQPKGHESPKGHFESCTGSCTTCEAHCHGLISEDVRP*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0005515
Pfam
Leucine Rich Repeat
KEGG
hypothetical protein; K16226 disease resistance protein RPS4 (A)