Names & Information

Knowledge of BnaC09G0438100ZY:

Gene Name
BnaC09G0438100ZY
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC09g40250D [Brassica napus]
Best Hit (SwissProt)
Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1
NT seq
Len:1779 nt

ATGGCCTCGGCGATTGTTCCGTCGCTCAGGCTGAGTCCCAGTTTATCCGACGCCACGTCACCATCGTCTCCCTCTTCCTC
CGGCGACGATTTAGGGGCAATTCAGGAGACTACAGGAAGCTGGAGTACGGAAACGCTGATATCTCCTTTGTTGTTCACAC
TGGACCACCACCCAGAGGGCTATCATGGGTTGATCAAACAAGAGGTCTTCTCCATTACGTCGAAGAGCACTGTGCAAAAA
CTGTTTACACTCCTTGAGCTGTATTGCCGGGAGTCTATAGGTAGATACATTCGTGGAGCTCCTTTAGTGGACAAGGCAGA
TGCAAATCTTGATTCTGATGAATCGATCTCAGCGCTTACTATAGCATTGGTTTCTTCAGGGCCTAGTTTGCGTGCTCGTT
TTGTAGGGCAAGGATATAAGCATGTTTGTGGAAGAGCTGACATGTGGTACCTGAGGTTTCAGCTCATCTTGAAGGTGCAC
TTAATCTTAGCTTCAACGGTTGACAAGAAGAAGGTGAAGAAATGGAAAGAAGCTTTGACGATACTAGCTGCTATTTCTGG
TGAAGATTCTCGGAATTGGAGGGATGAGTCAAAGCTGATTAAGAAGATCGTTAAAGACATTTCTGATAAACTGGTTTTCA
CTTCATTGGATGATTCAAAAGGGTTGATTGGAATGAGTTCCCATATGGACTTTCTGCAGTCTATGATGTCTATAGAGGAC
GAAGATGTTCGAATGGTAGGGATTTGGGGAATGGGTGGAGTTGGGAAAACTACGATTGCTAAATACTTATACAGTGGACT
CTCATGTCGATTCCAAGCTCATTGCTTCATAGAGAATGTGAAGGAAGTCTATAACAGATATGGAGTTAGGCATTTTACAA
GGAGAGTTTCTATGCAGAATGTTTGGAGAGCTTTCGAGGGATTGTCTAATCTCAAGCTTCTCAACTTCTATGACCTTGCA
TATAACGGAGAGACCAGAATGCATCTACCTGATGGCCTAAGTTATCTCCCACGCAAGCTTCGTTCTCTACACTGGGATGG
ATACCCTTTAAAGTCTATGCCTTCAAGATTTCATCCGGAGTTTCTTGTTGAATTTTGTATGAGTAATAGCCATCTCCAAA
AACTTTGGAACGGAGTCCAGAGCTTTCCACCAGAAATATGCCAGACAATGAGATGCTTGAGGTGGCTTGATTTAGAAGGG
ACCGGTATTAAAGAACTGCCTGAAAACAATGGTAATTTGATAGCCCTCAAGGTGCTTCAAGCTAGAAGAACAGCGATAAG
ACGAGCACCACGGTCAATTGCGCTACTTACCCGTCTTCAAGTTTTAGCAATTGGGGATAGCTTCTATGTTTCAGAAGGTT
TACATTCTCTATGTCCTCGCTTATCAAGTTTTGATGACTTGAGAGTTCTGTGTCTAAGCAACATGAACATGACAGAGATT
CCTAACAGTATTGGTGACTTATGGAGTCTATCAGAACTTGATTTGAGTGCGAGCAACTGTTACAAACTGGATCAAGAGGC
ACAGAGTCTCATTCACCGTAACGTGCAGCTAGACTCAGCAAGACCAGAACACTTGTACTTTCCTGGAAGAGATGTGCCAT
CTTGCTTCAGTCACCAAACCATGGGACCTTCGCTAAGAATACACGTGCCTCAGAGTCAATCATCATCTGATATTCTGGGA
TTTTCCACCTGCATCATGATTGGAGGCAATGGGCAGTGCTCCATGAACGATGTCAAGATACGTTGTTCTTGTATTTTAAA
AGGAGTTGATGCTAAATAG
AA seq
Len:593 aa

MASAIVPSLRLSPSLSDATSPSSPSSSGDDLGAIQETTGSWSTETLISPLLFTLDHHPEGYHGLIKQEVFSITSKSTVQK
LFTLLELYCRESIGRYIRGAPLVDKADANLDSDESISALTIALVSSGPSLRARFVGQGYKHVCGRADMWYLRFQLILKVH
LILASTVDKKKVKKWKEALTILAAISGEDSRNWRDESKLIKKIVKDISDKLVFTSLDDSKGLIGMSSHMDFLQSMMSIED
EDVRMVGIWGMGGVGKTTIAKYLYSGLSCRFQAHCFIENVKEVYNRYGVRHFTRRVSMQNVWRAFEGLSNLKLLNFYDLA
YNGETRMHLPDGLSYLPRKLRSLHWDGYPLKSMPSRFHPEFLVEFCMSNSHLQKLWNGVQSFPPEICQTMRCLRWLDLEG
TGIKELPENNGNLIALKVLQARRTAIRRAPRSIALLTRLQVLAIGDSFYVSEGLHSLCPRLSSFDDLRVLCLSNMNMTEI
PNSIGDLWSLSELDLSASNCYKLDQEAQSLIHRNVQLDSARPEHLYFPGRDVPSCFSHQTMGPSLRIHVPQSQSSSDILG
FSTCIMIGGNGQCSMNDVKIRCSCILKGVDAK*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0006952
Pfam
NB-ARC domain
KEGG
uncharacterized protein At2g41620-like; K14309 nuclear pore complex protein Nup93 (A)