Names & Information
Knowledge of BnaC09G0445200ZS:
| Gene Name | BnaC09G0445200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g36260D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=3 SV=1 |
| NT seq | Len:2205 nt ATGGCAGACGCAGTGGTTGCATTTGGTTTGCATTTTCTCTGGGAGCTTCTCATTCGAGAATCCAATCGGCTCAAAGCAGT CCAAGAACAAGCCACCGAGCTGCAAAACGATCTGAGACGGCTAAAATCTTTCGTGAAAGACGCAGAAGCAAGAGCGAGAG AGTTAGGGATCAAGAAGCATTTAAAGAGAGTTTCTTGCATCACATTTGCTCATCAGAAGCTTAGCTCTCAGATCAGAGGC ATAAGCAGAAGGATCTCCAAGGTTATAGACAATATGGAGACTGTTGAGAAACTAGTTGGTCATCTCGTGGAAGAGAATGG AGTTCAAGTTGTTTCTGTTTGCGGTATGGGCGGCATTGGGAAAACAACTCTTGCAAGACAAGTTTTTCATCATGAGAAGG TCCGGCGTCGTTTCAATGGATTTGCTTGGGTGTTTGTTTCACAAGAGTGTAGGCAAAAGCATAGATGTTTGACTGTGCTT GATGATGTATGGAGCAGTGCAGCTTGGGAGCTTATAAAGCCAGCTTTTCCACATAGATCAGGTAGCAAGATCTTACTCAC TTCTCGGAATGAGAGTGTTGGTTTGCATCCAGATCTAAGATGCATTATCTTTAGGCCTAGGTTCCTAACTCATGATGATA GCTGGGAAGTTTTTCAAAAGATAGCTTTGATTGAGAGAAATGATATAGAGTTTGAGGTTGATGATTTAACGGAAGAGATA CAACAAATGCTCAAACACTGTGGAGGGTTACCATTAGCTGTAAAAACTCGTGGAGGGTTGTTAGCTACAAAACAAGGGAT AGTGATGGTGGGAAGTGAAGAGAGTACTATTGTAGATGTCGCAGAGGATTATCTCGAGAAGTTGGTCAAGAGGAGTATGG TTTTAGTAGGAAAGAGGAACATTGTGACATCAAGAATAGAATCTTGTCGTCTACATGATGTGGTTAGAGAAGTCTGTTTA TTTAAAGCCAAAGAAGAAAGTTTCATGCAAGTTTTCAATGCTCAGAGCAGTGTCTTGGATGCTACTAGTACTCGAAGAGT TGCTGTACATTTAGTTGATGATGATGAAAATGAACCTGTTATATTTCAGCAGAGGAAGATTCAAAACCTCAAAGCAAGGG CCCTTTTGTATATCACTAGAGACTTCCATCCTTGGATATTATCAACCCGGAGTTTTCGAGGTTTACGATCTCTTAGAGTC TTGGATCTCTTTGGAGCTCAGTTCAGAAGACCCAAGTTACATAAGAGCATAGGGAAGCTCATCCACTTGAGGTACTTGAG TTTGAAAGAGACAAACTTGTCTGTATTACCATCTTCTCTAGGAAACCTTGAGTTGTTGGTTTATTTGGATTTAGAGATTT ATGAGACAATGGTTCACATACCAGATGTCTTAAAGAAGATGAAGAAGCTGAGGTATCTTATGTTACCTGATGAACTCAGC AATAAAACAAAGCTGGAATTAAGTGGTTTAGTGAAGTTGGAGACTCTCAAGAACTTCTCATTAAAGCACAGTAGCGTCAA AGATCTAATCAATATGACCAAACTCAGAACTTTGTGGGTCTGTTGTGCCTATGGTAACCTTGCAGAAGGAGTCTTACCTT TGTCCCTCGGTGCATCATTGAAACACTTGGAGGAGCTAATGTTATACAACAAAAGAAACGGCCAAGAACAAGTCCAACCC TCCAAAATCGATGCAGGAGCCTTTGTTTCTGGTTTCCAAAGACTTAACCAGCTAAGGTTAGATATAGAGATTGAAACGTT ACCTAATGAACTTCAGTTCCCTTCCTGTATCACCTCTGTTTCGTTATCCTCTTGTGTCCTACAAGAGGATCCAATGCCAG TTCTTGAGAAGCTACACAGTTTAAAGATTGTTAGTCTAGAGCTGAATGCATTCACAGGGAGGAAAATGGTCTGCTCGAAA GCCAGGTTCCCTAAACTGCTTACTCTAGAGTTTTGGATACTCGACAACCTTGAGGAATGGGTTGTAGAAGAAGAGTCCAT GCCTTGTCTTTGTCATTTGGAGATCAATGACTGCAGAAAGTTGAAGAGTCTTCCTGATGGGTTAAGGTACATAACTAGTT TAGAGGAGGTGAGAGTTGGATGGATGGAAAATGCATTCAAGGATAAGTTGATCCAAGGTGGAGAAGATTACTACAAGATA CAGTATGTATCTTATGTTGTGTTTCACAATTGCAGTGACGAATGA |
| AA seq | Len:735 aa MADAVVAFGLHFLWELLIRESNRLKAVQEQATELQNDLRRLKSFVKDAEARARELGIKKHLKRVSCITFAHQKLSSQIRG ISRRISKVIDNMETVEKLVGHLVEENGVQVVSVCGMGGIGKTTLARQVFHHEKVRRRFNGFAWVFVSQECRQKHRCLTVL DDVWSSAAWELIKPAFPHRSGSKILLTSRNESVGLHPDLRCIIFRPRFLTHDDSWEVFQKIALIERNDIEFEVDDLTEEI QQMLKHCGGLPLAVKTRGGLLATKQGIVMVGSEESTIVDVAEDYLEKLVKRSMVLVGKRNIVTSRIESCRLHDVVREVCL FKAKEESFMQVFNAQSSVLDATSTRRVAVHLVDDDENEPVIFQQRKIQNLKARALLYITRDFHPWILSTRSFRGLRSLRV LDLFGAQFRRPKLHKSIGKLIHLRYLSLKETNLSVLPSSLGNLELLVYLDLEIYETMVHIPDVLKKMKKLRYLMLPDELS NKTKLELSGLVKLETLKNFSLKHSSVKDLINMTKLRTLWVCCAYGNLAEGVLPLSLGASLKHLEELMLYNKRNGQEQVQP SKIDAGAFVSGFQRLNQLRLDIEIETLPNELQFPSCITSVSLSSCVLQEDPMPVLEKLHSLKIVSLELNAFTGRKMVCSK ARFPKLLTLEFWILDNLEEWVVEEESMPCLCHLEINDCRKLKSLPDGLRYITSLEEVRVGWMENAFKDKLIQGGEDYYKI QYVSYVVFHNCSDE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | probable disease resistance RPP8-like protein 2; K19613 leucine-rich repeat protein SHOC2 (A) |